DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Gak ATTTA 95-4012 4261-4265;4295-4299

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 231580 Gak cguuCCGUCACCGGACAUGUca | || | :||||||| guuuGCCAAUCAUCUGUACAua 3 19 665 686 [mm9:5:108998461-108998482:-] 0.6309 134 0 -9.76 -0.2432 MIMAT0004519 mmu-let-7g* 231580 Gak cguuCCGUCACCGGACAUGUca | || | :||||||| guuuGCCAAUCAUCUGUACAua 3 19 392 413 [mm9:5:108998461-108998482:-] 0.6309 134 0 -9.76 -0.2331 MIMAT0004519 mmu-let-7g* 231580 Gak cguuccgucaccgGACAUGUca :|||||| auauuuuuuaaagUUGUACAuu 3 10 629 650 [mm9:5:109009250-109009271:-] 0.5014 121 0 -6.53 -0.1232 MIMAT0004523 mmu-miR-29b* 231580 Gak auuugguggUAUAC-UUUGGUCg :| || ||||||| auggucugaGUUUGAAAACCAGg 2 14 231 253 [mm9:5:108998894-108998916:-] 0.7734 144 7 -12.44 -0.4401 MIMAT0004527 mmu-miR-124* 231580 Gak uaGUUCCAGGCGACACU-UGUGc ||| || |||||| |||| ugCAAAGU---CUGUGACACACa 2 21 493 512 [mm9:5:109009388-109009407:-] 0.5014 124 0 -14.34 -0.5472 MIMAT0000143 mmu-miR-9* 231580 Gak ugaaagcCAAUA-GAUCGAAAUa | ||| ||||||| gggacauGCUAUAAGAGCUUUAg 2 16 146 168 [mm9:5:109009732-109009754:-] 0.5004 142 7 -7.69 -0.1759 MIMAT0004531 mmu-miR-135a* 231580 Gak gcGGUGCCGAGG---U--UA-GGGAUAu :||:|||||| | || |||||| ugUCAUGGCUCCUAGAUUAUGCCCUAUu 2 21 356 383 [mm9:5:109009517-109009544:-] 0.5003 126 6 -30.65 -0.8551 MIMAT0004535 mmu-miR-150* 231580 Gak gauAGGGGGUCCGGACAUGGUc |::|:: |:||||||| guuUUUCUUUUUCUUGUACCAg 2 20 487 508 [mm9:5:108998639-108998660:-] 0.4849 151 7 -21.10 -0.6488 MIMAT0004535 mmu-miR-150* 231580 Gak gauAGGGGGUCCGGACAUGGUc |::|:: |:||||||| guuUUUCUUUUUCUUGUACCAg 2 20 214 235 [mm9:5:108998639-108998660:-] 0.4849 151 7 -21.10 -0.7084 MIMAT0004541 mmu-miR-188-3p 231580 Gak acguuuGGGACGUAC-ACCCUc |:|||: || ||||| agaguuCUCUGUUUGAUGGGAc 2 16 129 150 [mm9:5:109009750-109009771:-] 0.5004 123 0 -17.16 -0.5116 MIMAT0000240 mmu-miR-207 231580 Gak cucccuccucucgguCCUCUUCg ||||||| cucuccaugcccuuuGGAGAAGa 2 9 39 61 [mm9:5:109009839-109009861:-] 0.4997 140 7 -15.07 -0.7910 MIMAT0004572 mmu-miR-290-3p 231580 Gak cccgaaUUUUGAUCCGCCGUGAAa | | | | :||||||| gauggcACAUGUCGCUGGCACUUc 2 19 589 612 [mm9:5:108998535-108998558:-] 0.4569 146 7 -14.87 -0.2614 MIMAT0004572 mmu-miR-290-3p 231580 Gak cccgaaUUUUGAUCCGCCGUGAAa | | | | :||||||| gauggcACAUGUCGCUGGCACUUc 2 19 316 339 [mm9:5:108998535-108998558:-] 0.4569 146 7 -14.87 -0.3003 MIMAT0000370 mmu-miR-292-3p 231580 Gak ugugaguUUUGGACCG-CCGUGAAa | |: | || ||||||| ggauggcACAUGUCGCUGGCACUUc 2 18 588 612 [mm9:5:108998535-108998559:-] 0.4777 148 7 -15.79 -0.2898 MIMAT0000370 mmu-miR-292-3p 231580 Gak ugugaguUUUGGACCG-CCGUGAAa | |: | || ||||||| ggauggcACAUGUCGCUGGCACUUc 2 18 315 339 [mm9:5:108998535-108998559:-] 0.4777 148 7 -15.79 -0.3316 MIMAT0004622 mmu-let-7c-1* 231580 Gak ccuuucgaucuuccaACAUGUc |||||| aguuugccaaucaucUGUACAu 2 8 664 685 [mm9:5:108998462-108998483:-] 0.6309 120 6 -4.86 -0.2448 MIMAT0004622 mmu-let-7c-1* 231580 Gak ccuuucgaucuuccaACAUGUc |||||| aguuugccaaucaucUGUACAu 2 8 391 412 [mm9:5:108998462-108998483:-] 0.6309 120 6 -4.86 -0.2315 MIMAT0004622 mmu-let-7c-1* 231580 Gak ccuuucgaucUUCCAACAUGUc || |||||||| aauauuuuuuAAAGUUGUACAu 2 13 628 649 [mm9:5:109009251-109009272:-] 0.5014 152 7 -9.19 -1.0642 MIMAT0004626 mmu-miR-18a* 231580 Gak gucuucCUCGUGAAUCCCGUCa |: ||| ||||||| cccacaGGCCAC--AGGGCAGc 2 17 165 184 [mm9:5:108998963-108998982:-] 0.7734 145 7 -18.99 -0.2098 MIMAT0004635 mmu-miR-92a* 231580 Gak cauUACGGUG-GU--UAGGGGUGGa :|| ||| || | ||||||| ucuGUGACACACAUCACCCCCACCc 2 20 500 524 [mm9:5:109009376-109009400:-] 0.5014 153 7 -22.63 -0.2635 MIMAT0000569 mmu-miR-330* 231580 Gak agaGACGUCC-GGGACACGAA-ACg || | || ||:||||||| || gggCUUCUGGACCUUGUGCUUGUGg 2 21 28 52 [mm9:5:108999095-108999119:-] 0.4341 135 0 -22.16 -0.1202 MIMAT0000569 mmu-miR-330* 231580 Gak agagacGUCCGGGAC-ACG-AAACg || |:| || ||| |||| uuggcaCACGUCAUGAUGCAUUUGu 2 18 671 695 [mm9:5:109009205-109009229:-] 0.5014 120 0 -12.04 -0.5875 MIMAT0000578 mmu-miR-337-3p 231580 Gak uccgUAGUA-UAUCCUCGACUu ||| | || |||||||| gaugAUCUUCAU-GGAGCUGAa 2 18 204 224 [mm9:5:108998923-108998943:-] 0.7734 154 7 -17.95 -1.1249 MIMAT0000605 mmu-miR-350 231580 Gak cuUUCACAUACCCGAAACACUu |: ||| | ||||||| acAGCUGUCACAG-UUUGUGAu 2 21 537 557 [mm9:5:108998590-108998610:-] 0.5199 142 7 -7.97 -0.4088 MIMAT0000605 mmu-miR-350 231580 Gak cuUUCACAUACCCGAAACACUu |: ||| | ||||||| acAGCUGUCACAG-UUUGUGAu 2 21 264 284 [mm9:5:108998590-108998610:-] 0.5199 142 7 -7.97 -0.4605 MIMAT0000605 mmu-miR-350 231580 Gak cuUUCACAUACCCGAAACACUu |: ||| | ||||||| ggAGUUGU-UCAUAUUUGUGAa 2 21 401 421 [mm9:5:109009479-109009499:-] 0.5008 142 7 -12.75 -1.1135 MIMAT0000605 mmu-miR-350 231580 Gak cuUUCAC-AUACCCGAAAC-ACUu ||| | | | | ||||| ||| auAAGAGCUUUAGCCUUUGUUGAg 2 21 156 179 [mm9:5:109009721-109009744:-] 0.5004 123 0 -8.84 -0.2719 MIMAT0004661 mmu-miR-28* 231580 Gak aggUCGUCGAGUGUUAGAUCAc | || :|:| |||:|||| aaaAACAUUUUAAAAUUUAGUa 2 20 606 627 [mm9:5:109009273-109009294:-] 0.5014 147 0 -9.72 -0.1359 MIMAT0004666 mmu-miR-33* 231580 Gak cacuacgUGACACCUUUGUAAc |:| | ||||||| gauuuuaAUUUUAAAAACAUUu 2 16 594 615 [mm9:5:109009285-109009306:-] 0.5014 147 7 -3.94 -1.2397 MIMAT0000745 mmu-miR-380-3p 231580 Gak uucuacaccugguauGAUGUAu |||||| gcccuguuuguuuacCUACAUg 2 8 277 298 [mm9:5:109009602-109009623:-] 0.5006 120 6 -7.91 -0.1217 MIMAT0001090 mmu-miR-409-3p 231580 Gak uccccaaguggcucgUUGUAAg |||||| gauuuuaauuuuaaaAACAUUu 2 8 594 615 [mm9:5:109009285-109009306:-] 0.5014 120 6 -4.80 -0.2365 MIMAT0001093 mmu-miR-411* 231580 Gak ccaaucacCUGGCACAAUGUAu |:|:||||||||| cucagaaaGGCUGUGUUACAUg 2 15 332 353 [mm9:5:109009547-109009568:-] 0.5003 162 7 -21.32 -0.4289 MIMAT0002105 mmu-miR-464 231580 Gak auAGAGUGUC-----UUAUUUGAACCAu | |||||| :|| ||||||| gcUGUCACAGUUUGUGAUUUACUUGGUg 2 22 540 567 [mm9:5:108998580-108998607:-] 0.5092 152 7 -20.63 -0.4999 MIMAT0002105 mmu-miR-464 231580 Gak auAGAGUGUC-----UUAUUUGAACCAu | |||||| :|| ||||||| gcUGUCACAGUUUGUGAUUUACUUGGUg 2 22 267 294 [mm9:5:108998580-108998607:-] 0.5092 152 7 -20.63 -0.5564 MIMAT0004759 mmu-miR-466a-5p 231580 Gak auacauguACAUGUGUGUGUAu |||: |||||||| gcaaagucUGUG-ACACACAUc 2 15 494 514 [mm9:5:109009386-109009406:-] 0.5014 152 7 -14.42 -0.3141 MIMAT0003409 mmu-miR-467a 231580 Gak gcGUAUAUGUACGUCCGUGAAu || ||:: || ||||||| ggCACAUGU-CGCUGGCACUUc 2 21 592 612 [mm9:5:108998535-108998555:-] 0.4569 154 7 -17.13 -0.2614 MIMAT0003409 mmu-miR-467a 231580 Gak gcGUAUAUGUACGUCCGUGAAu || ||:: || ||||||| ggCACAUGU-CGCUGGCACUUc 2 21 319 339 [mm9:5:108998535-108998555:-] 0.4569 154 7 -17.13 -0.3003 MIMAT0003167 mmu-miR-540-3p 231580 Gak ggUCC-UAGCUGGAGA-CUGGa ||| | |:|:||| |||| cuAGGCCUGGGCUUCUGGACCu 2 19 20 41 [mm9:5:108999106-108999127:-] 0.4341 121 0 -23.49 -0.1155 MIMAT0003167 mmu-miR-540-3p 231580 Gak ggucCUAGCUGG-AGACUGGa || | || ||||||| uuguGAACAUCCAUCUGACCa 2 17 415 435 [mm9:5:109009465-109009485:-] 0.5014 147 7 -14.98 -0.8657 MIMAT0003373 mmu-miR-302b* 231580 Gak ucuuucguaaggguacAAUUUCa |||||| auuuaguaaauauuuuUUAAAGu 2 8 620 642 [mm9:5:109009258-109009280:-] 0.5014 120 6 -6.23 -0.1368 MIMAT0003375 mmu-miR-302c* 231580 Gak cgucCAUUGGGGUACAAUUUCg |||| : : | |||||| uuuaGUAAAUAUUUUUUAAAGu 2 19 621 642 [mm9:5:109009258-109009279:-] 0.5014 126 6 -6.75 -0.1355 MIMAT0003732 mmu-miR-668 231580 Gak ccaucACCCGGCUCGGCUCACUGu | | |: |::||||||| agcuuUAGCCUUUGUUGAGUGACa 2 20 161 184 [mm9:5:109009716-109009739:-] 0.5004 151 7 -22.87 -0.9758 MIMAT0003896 mmu-miR-763 231580 Gak cggugaccAAGAAGG-GUCGACc | ||||| |||||| auuuauauUCCUUCCACAGCUGu 2 15 522 544 [mm9:5:108998603-108998625:-] 0.5190 126 6 -17.81 -0.3707 MIMAT0003896 mmu-miR-763 231580 Gak cggugaccAAGAAGG-GUCGACc | ||||| |||||| auuuauauUCCUUCCACAGCUGu 2 15 249 271 [mm9:5:108998603-108998625:-] 0.5190 126 6 -17.81 -0.4196 MIMAT0003741 mmu-miR-674* 231580 Gak aaCAAGACUCUACCCUCGACac | ||| || ||||||| auGAUCU-UCAU-GGAGCUGaa 3 21 205 224 [mm9:5:108998923-108998942:-] 0.7734 128 0 -14.69 -0.1040 MIMAT0004825 mmu-miR-423-5p 231580 Gak uuucagagCGAGAGACGGGGAGu |||| ||||||| aaaccaggGCUCGAGGCCCCUCu 2 16 246 268 [mm9:5:108998879-108998901:-] 0.7734 151 7 -23.29 -0.2541 MIMAT0003455 mmu-miR-679 231580 Gak ugguuCUCAGUGGAGUGUCAGg || || | ||||||| auucuGA-UC-CAACACAGUCc 2 18 469 488 [mm9:5:109009412-109009431:-] 0.5014 141 7 -17.53 -0.5286 MIMAT0003457 mmu-miR-680 231580 Gak gggGGUACAGUCGUC-UACGGg ||:| | | ||| ||||| cagCCGUAUGAACAGUAUGCCa 2 19 181 202 [mm9:5:108998945-108998966:-] 0.7734 126 0 -19.15 -1.1234 MIMAT0003469 mmu-miR-690 231580 Gak aaACCA-ACACUCG-GAUCGGAAa || | | |||| :||||||| caUGCUAUAAGAGCUUUAGCCUUu 2 21 150 173 [mm9:5:109009727-109009750:-] 0.5004 154 7 -18.02 -0.5633 MIMAT0003469 mmu-miR-690 231580 Gak aaacCAACACUCGGAUCGGAAa ||| | | |:||||||| guauGUUCU-A-CUUAGCCUUu 2 19 92 111 [mm9:5:109009789-109009808:-] 0.5004 150 7 -14.66 -0.6919 MIMAT0003472 mmu-miR-693-5p 231580 Gak cuUUUGAAAGCCUAC-ACCGAc ||||| |: || ||||| uuAAACUAUUUUCUGAUGGCU- 2 20 688 708 [mm9:5:108998439-108998459:-] 0.6150 123 0 -10.39 -1.1235 MIMAT0003472 mmu-miR-693-5p 231580 Gak cuUUUGAAAGCCUAC-ACCGAc ||||| |: || ||||| uuAAACUAUUUUCUGAUGGCUg 2 20 415 436 [mm9:5:108998438-108998459:-] 0.6150 123 0 -15.04 -0.8627 MIMAT0003472 mmu-miR-693-5p 231580 Gak cuuuuGAAAGCCUACA-CCGAc ||||:|| ||| |||| cuauuCUUUUGGUUGUGGGCUu 2 17 722 743 [mm9:5:109009157-109009178:-] 0.5014 132 0 -17.92 -1.0557 MIMAT0004189 mmu-miR-693-3p 231580 Gak aaUGUCGGUGUAGAC-UUUC-GACg ||||:| ::|:|| |||| ||| acACAGUCCUGUUUGCAAAGUCUGu 2 22 480 504 [mm9:5:109009396-109009420:-] 0.5014 136 0 -21.12 -0.1459 MIMAT0004826 mmu-miR-146b* 231580 Gak uggucuuGACUCAGGGAUCCCg || | :||||||| ucugccuCUCAUCUCCUAGGGg 2 16 63 84 [mm9:5:108999063-108999084:-] 0.4604 147 7 -17.96 -0.1334 MIMAT0003481 mmu-miR-695 231580 Gak aagucaGUGGAUACGGGUUAGa ||:||| ||||||| cuggacCAUCUACUCCCAAUCa 2 17 387 408 [mm9:5:108998739-108998760:-] 0.3428 160 7 -18.24 -0.3649 MIMAT0003481 mmu-miR-695 231580 Gak aagucaguggauacgGGUUAGa |||||| acucugaucaguuugCCAAUCa 2 8 655 676 [mm9:5:108998471-108998492:-] 0.5008 120 6 -12.94 -0.1091 MIMAT0003481 mmu-miR-695 231580 Gak aagucaGUGGAUACGGGUUAGa ||:||| ||||||| cuggacCAUCUACUCCCAAUCa 2 17 114 135 [mm9:5:108998739-108998760:-] 0.3428 160 7 -18.24 -0.4175 MIMAT0003481 mmu-miR-695 231580 Gak aagucaguggauacgGGUUAGa |||||| acucugaucaguuugCCAAUCa 2 8 382 403 [mm9:5:108998471-108998492:-] 0.5008 120 6 -12.94 -0.1219 MIMAT0003483 mmu-miR-696 231580 Gak ggGUG-UCGUUCGUGUGCg ||: ||: :||||||| ugCAUGAGUUGGCACACGu 2 17 663 681 [mm9:5:109009219-109009237:-] 0.5014 151 7 -19.34 -0.2769 MIMAT0003485 mmu-miR-455* 231580 Gak gcuacaucAGGUUUCCGUGUAu |: :| ||||||| gucaccucUUGGAUGGCACAUg 2 15 578 599 [mm9:5:108998548-108998569:-] 0.4777 146 7 -15.03 -0.1573 MIMAT0003485 mmu-miR-455* 231580 Gak gcuacaucAGGUUUCCGUGUAu |: :| ||||||| gucaccucUUGGAUGGCACAUg 2 15 305 326 [mm9:5:108998548-108998569:-] 0.4777 146 7 -15.03 -0.1833 MIMAT0003485 mmu-miR-455* 231580 Gak gcuACAUCAGGUUUCCGUGUAu | || ::: ||||||| aguUUUAUCUUGCUGGCACAUu 2 20 450 471 [mm9:5:109009429-109009450:-] 0.5014 143 7 -12.37 -0.5613 MIMAT0003496 mmu-miR-706 231580 Gak aaaaaacucugucCCAAAGAGa |||||||| aauuccuaucuuuGGUUUCUCa 2 10 563 584 [mm9:5:109009316-109009337:-] 0.5014 145 7 -10.85 -0.7979 MIMAT0003498 mmu-miR-708* 231580 Gak gauCUU-CGA-GUGUCAGA-UCAAc ||| | | ||::|||| |||| gcuGAAUGAUGCAUGGUCUGAGUUu 2 20 219 243 [mm9:5:108998904-108998928:-] 0.7734 125 0 -15.25 -0.8376 MIMAT0003499 mmu-miR-709 231580 Gak aggagGACGGAGACGGAGg :||:||||||||| uugggUUGUCUCUGCCUCu 2 15 53 71 [mm9:5:108999076-108999094:-] 0.4467 162 7 -25.72 -0.1654 MIMAT0003510 mmu-miR-717 231580 Gak ucucuuccauagagaCAGACUc |||||| gcugaaugaugcaugGUCUGAg 2 8 219 240 [mm9:5:108998907-108998928:-] 0.7734 120 6 -16.54 -0.1551 MIMAT0004841 mmu-miR-871 231580 Gak guacUGAC-CGUGAUUA-GACUUAu :||| ||: ||| |||||| aggaGCUGUUCAUGAAUCCUGAAUg 2 20 23 47 [mm9:5:108998827-108998851:-] 0.3038 126 6 -14.97 -0.1171 MIMAT0004846 mmu-miR-881 231580 Gak agaUAAGUCUUUUCUGUGUCAa |||| || ||||||| cacAUUCUGAUCCAACACAGUc 2 20 466 487 [mm9:5:109009413-109009434:-] 0.5014 155 7 -14.37 -0.3071 MIMAT0004875 mmu-miR-466b-5p 231580 Gak guacauguACAUGUGUGUGUAg |||: |||||||| gcaaagucUGUG-ACACACAUc 2 15 494 514 [mm9:5:109009386-109009406:-] 0.5014 152 7 -18.22 -0.3141 MIMAT0004877 mmu-miR-466c-5p 231580 Gak auacauguACGUGUGUGUGUAg ||:: |||||||| gcaaagucUGUG-ACACACAUc 2 15 494 514 [mm9:5:109009386-109009406:-] 0.5014 148 7 -16.65 -0.3168 MIMAT0004879 mmu-miR-466e-5p 231580 Gak auacauguACAUGUGUGUGUAg |||: |||||||| gcaaagucUGUG-ACACACAUc 2 15 494 514 [mm9:5:109009386-109009406:-] 0.5014 152 7 -18.22 -0.3141 MIMAT0004881 mmu-miR-466f-5p 231580 Gak guACGUGUACGUGUGUGUGCAu ||||:: |: :||||||| ugUGCAUGAGUUGGCACACGUc 2 21 661 682 [mm9:5:109009218-109009239:-] 0.5014 160 7 -20.13 -0.2072 MIMAT0004882 mmu-miR-466f-3p 231580 Gak cacaCAUACACACACACAUAc || || ||||||| auaaGUCCUUGCCUGUGUAUa 2 18 249 269 [mm9:5:109009631-109009651:-] 0.5010 145 7 -7.23 -0.4168 MIMAT0004883 mmu-miR-466g 231580 Gak acacacacguacacAGACAUa |||||| caguuugccaaucaUCUGUAc 2 8 663 683 [mm9:5:108998464-108998484:-] 0.6309 120 6 -8.97 -0.1248 MIMAT0004883 mmu-miR-466g 231580 Gak acacacacguacacAGACAUa |||||| caguuugccaaucaUCUGUAc 2 8 390 410 [mm9:5:108998464-108998484:-] 0.6309 120 6 -8.97 -0.1392 MIMAT0004884 mmu-miR-466h 231580 Gak auGUGUGUUCGUGUAC-GUGUGu ::|| |||: ::|| ||||| uuUGCA-AAGUCUGUGACACACa 2 21 491 512 [mm9:5:109009388-109009409:-] 0.5014 122 0 -15.17 -0.5507 MIMAT0004933 mmu-miR-878-3p 231580 Gak agauggGUCACACCACAGUACg || ||| |||||||| guguuaCA-UGU-GUGUCAUGg 2 17 344 363 [mm9:5:109009537-109009556:-] 0.5003 152 7 -17.57 -0.1999 MIMAT0005830 mmu-miR-466l 231580 Gak uuauacacacguacaUAAAUAu |||||| agaggaaaaguguugAUUUAUa 2 8 234 255 [mm9:5:108998619-108998640:-] 0.5190 120 6 -9.38 -0.1072 MIMAT0005834 mmu-miR-466i 231580 Gak aucacacauacacaCACACAUa ||||||| guugagugacaaacGUGUGUAc 2 9 174 195 [mm9:5:109009705-109009726:-] 0.5004 140 7 -11.18 -0.3102 MIMAT0005837 mmu-miR-1187 231580 Gak aaUGUGUGUAUGUG-UGUGUGUAu :|| | :| ::: |||||||| uuGCA-AAGUCUGUGACACACAUc 2 22 492 514 [mm9:5:109009386-109009408:-] 0.5014 146 7 -12.47 -0.3194 MIMAT0005842 mmu-miR-669h-3p 231580 Gak acACGUA-CAC-ACAUA-UACGUAu | ||| | | || || |||||| ucUUCAUGGAGCUGAAUGAUGCAUg 2 21 209 233 [mm9:5:108998914-108998938:-] 0.7734 122 6 -12.72 -0.9468 MIMAT0005846 mmu-miR-467f 231580 Gak acAUCCA--CACACACACAUAUa || || || |||||||| caUAAGUCCUUGCCUGUGUAUAa 2 20 248 270 [mm9:5:109009630-109009652:-] 0.5010 150 7 -8.25 -0.7294 MIMAT0007863 mmu-miR-1902 231580 Gak uuCAGUACGGAUGAC-GUGGAGa ||| || : :||| |||||| guGUC-UGGUGGCUGUCACCUCu 2 21 565 586 [mm9:5:108998561-108998582:-] 0.4984 126 6 -21.65 -0.1036 MIMAT0007863 mmu-miR-1902 231580 Gak uuCAGUACGGAUGAC-GUGGAGa ||| || : :||| |||||| guGUC-UGGUGGCUGUCACCUCu 2 21 292 313 [mm9:5:108998561-108998582:-] 0.4984 126 6 -21.65 -0.1216 MIMAT0009392 mmu-miR-1929 231580 Gak gagACGAGAUAUUUCAGGAUCUu ||: : || :: ||||||| augUGUGUCAU-GGCUCCUAGAu 2 21 351 372 [mm9:5:109009528-109009549:-] 0.5003 146 7 -13.62 -0.1420 MIMAT0009399 mmu-miR-1935 231580 Gak ucuCUAGGCGGUCGGAGACGGa |:|: | : |:||||||| uguGGUUGGGUUGUCUCUGCCu 2 20 48 69 [mm9:5:108999078-108999099:-] 0.4467 155 7 -23.08 -0.1501 MIMAT0009407 mmu-miR-1942 231580 Gak guuggucuacuucuGUAGACu |||||| aucaguuugccaauCAUCUGu 2 8 661 681 [mm9:5:108998466-108998486:-] 0.6309 120 6 -14.09 -0.1064 MIMAT0009407 mmu-miR-1942 231580 Gak guuggucuacuucuGUAGACu |||||| aucaguuugccaauCAUCUGu 2 8 388 408 [mm9:5:108998466-108998486:-] 0.6309 120 6 -14.09 -0.1274 MIMAT0009419 mmu-miR-669m 231580 Gak uauACAAAC-ACAC-CUAC-AUAUa |||||| || | ||| |||| cucUGUUUGAUGGGACAUGCUAUAa 2 20 135 159 [mm9:5:109009741-109009765:-] 0.5004 125 0 -11.01 -0.4836 MIMAT0009442 mmu-miR-1969 231580 Gak ugGGUACAAUUUC-AG-AGGUAGAa :||| || : | | ||||||| guUCAUAUUUGUGAACAUCCAUCUg 2 22 407 431 [mm9:5:109009469-109009493:-] 0.5008 147 7 -14.02 -0.4481 MIMAT0009444 mmu-miR-1970 231580 Gak guUUCGGAUAGGGGU------CACUGUGu |: |||:|:: || ||||||| acAGUCCUGUUUGCAAAGUCUGUGACACa 2 22 482 510 [mm9:5:109009390-109009418:-] 0.5014 144 7 -23.90 -0.6297 MIMAT0009446 mmu-miR-1971 231580 Gak agAGUCGGGUCGGAAAUg || |::|||||||| guUCUACUUAGCCUUUAc 2 17 96 113 [mm9:5:109009787-109009804:-] 0.5004 156 7 -21.46 -0.6942 MIMAT0009458 mmu-miR-1981 231580 Gak cgGUGC-AGAUUCGGGUCGGAAAUg :|:| |||| |::|||||||| ugUAUGUUCUA--CUUAGCCUUUAc 2 23 91 113 [mm9:5:109009787-109009809:-] 0.5004 162 7 -24.34 -0.6942 MIMAT0012772 mmu-miR-599 231580 Gak caAACUAUUUG---ACUGUGUu ||| ||:: ||||||| guUUGCAAAGUCUGUGACACAc 2 18 490 511 [mm9:5:109009389-109009410:-] 0.5014 144 7 -10.69 -0.1936 MIMAT0012773 mmu-miR-767 231580 Gak acGAGUCUGUUGGUACC-ACGu || ||:::|:|||| ||| gcCUGUGAUGGCUAUGGCUGCa 2 20 275 296 [mm9:5:108998851-108998872:-] 0.3995 127 0 -19.58 -0.1148 MIMAT0015645 mmu-miR-3473 231580 Gak ccGACUCGGUAGAGAGGu |||: | ||||||| cgCUGGCACUUCUCUCCu 2 17 601 618 [mm9:5:108998529-108998546:-] 0.4569 152 7 -20.62 -0.3138 MIMAT0015645 mmu-miR-3473 231580 Gak ccGACUCGGUAGA-GAGGu |||: |||||| |||| gcCUGGACCAUCUACUCCc 2 17 385 403 [mm9:5:108998744-108998762:-] 0.3428 132 0 -21.72 -0.2182 MIMAT0015645 mmu-miR-3473 231580 Gak ccGACUCGGUAGAGAGGu |||: | ||||||| cgCUGGCACUUCUCUCCu 2 17 328 345 [mm9:5:108998529-108998546:-] 0.4569 152 7 -20.62 -0.3580 MIMAT0015645 mmu-miR-3473 231580 Gak ccGACUCGGUAGA-GAGGu |||: |||||| |||| gcCUGGACCAUCUACUCCc 2 17 112 130 [mm9:5:108998744-108998762:-] 0.3428 132 0 -21.72 -0.2552 MIMAT0015645 mmu-miR-3473 231580 Gak ccgacucggUAGAGAGGu :||||||| gaccauagaGUCUCUCCa 2 10 28 45 [mm9:5:109009855-109009872:-] 0.4984 141 7 -16.27 -0.2259 MIMAT0015646 mmu-miR-3474 231580 Gak cuuaggugCAGAGGAGGGUCCc | | :||||||| -----ggaGGCAGUUCCCAGGa 2 15 1 17 [mm9:5:108999130-108999146:-] 0.5441 142 7 -15.89 -0.4208 MIMAT0000125 mmu-miR-23b 231580 Gak ccauuagggaccguUACACUa |||||| augcccuauugaucAUGUGAa 2 8 374 394 [mm9:5:109009506-109009526:-] 0.5003 120 6 -12.15 -0.1214 MIMAT0000128 mmu-miR-30a 231580 Gak gaaggUCAG-CUCCUACAAAUGu || | |:| ||||||| ggaugAGGCAGGGCUUGUUUACa 2 18 62 84 [mm9:5:109009816-109009838:-] 0.5007 148 7 -14.63 -0.2197 MIMAT0000128 mmu-miR-30a 231580 Gak gaaggucagcuccuACAAAUGu ||||||| ucaauugcccuguuUGUUUACc 2 9 271 292 [mm9:5:109009608-109009629:-] 0.5010 140 7 -8.47 -0.7463 MIMAT0000130 mmu-miR-30b 231580 Gak ucgACUCACAUCCU--ACAAAUGu |||| | |||: ||||||| ggaUGAG-GCAGGGCUUGUUUACa 2 20 62 84 [mm9:5:109009816-109009838:-] 0.5007 156 7 -19.27 -0.2238 MIMAT0000130 mmu-miR-30b 231580 Gak ucgacucacauccuACAAAUGu ||||||| ucaauugcccuguuUGUUUACc 2 9 271 292 [mm9:5:109009608-109009629:-] 0.5010 140 7 -8.64 -0.7389 MIMAT0000144 mmu-miR-132 231580 Gak gcUGGUACCGACAU-CU-GACAAu :|:||||||| | || ||||| ugGCUAUGGCUGCAGGAGCUGUUc 2 21 10 33 [mm9:5:108998841-108998864:-] 0.3038 139 0 -27.28 -0.2111 MIMAT0000158 mmu-miR-146a 231580 Gak uuggguaccuUAAGUCAAGAGu || ||||||| uguguuagccAUAGAGUUCUCu 2 13 117 138 [mm9:5:109009762-109009783:-] 0.5004 144 7 -12.29 -0.4034 MIMAT0000211 mmu-miR-182 231580 Gak gccacacucaAGA-UGGU--AACGGUUu ||| |:|| ||||||| cacauccuacUCUGAUCAGUUUGCCAAu 2 16 647 674 [mm9:5:108998473-108998500:-] 0.5008 149 7 -12.02 -0.6877 MIMAT0000211 mmu-miR-182 231580 Gak gccacacucaAGA-UGGU--AACGGUUu ||| |:|| ||||||| cacauccuacUCUGAUCAGUUUGCCAAu 2 16 374 401 [mm9:5:108998473-108998500:-] 0.5008 149 7 -12.02 -0.7343 MIMAT0000212 mmu-miR-183 231580 Gak ucaCUUAAGAUGGU---CAC-GGUAu |:|| |||:|| ||| |||| ucaGGAUGCUAUCAAUUGUGACCAUa 2 20 9 34 [mm9:5:109009866-109009891:-] 0.4918 126 0 -18.56 -0.1966 MIMAT0000214 mmu-miR-185 231580 Gak aguccuUGA-CGGAAAGAGAGGu :|| || |||||||| caugucGCUGGCACUUCUCUCCu 2 17 596 618 [mm9:5:108998529-108998551:-] 0.4569 151 7 -18.26 -0.3165 MIMAT0000214 mmu-miR-185 231580 Gak aguccuuGACGGAAAG-AGAGGu |||||| || ||||| guugucuCUGCCUCUCAUCUCCu 2 16 57 79 [mm9:5:108999068-108999090:-] 0.4467 131 0 -20.65 -0.1492 MIMAT0000214 mmu-miR-185 231580 Gak aguccuUGA-CGGAAAGAGAGGu :|| || |||||||| caugucGCUGGCACUUCUCUCCu 2 17 323 345 [mm9:5:108998529-108998551:-] 0.4569 151 7 -18.26 -0.3609 MIMAT0000214 mmu-miR-185 231580 Gak aguccuugacggaaAGAGAGGu ||||||| uugugaccauagagUCUCUCCa 2 9 24 45 [mm9:5:109009855-109009876:-] 0.4918 140 7 -16.26 -0.2202 MIMAT0000215 mmu-miR-186 231580 Gak ucggguuuuccucuUAAGAAAc ||||||| gacuauuauuuucuAUUCUUUu 2 9 710 731 [mm9:5:109009169-109009190:-] 0.5014 140 7 -5.60 -0.7193 MIMAT0000215 mmu-miR-186 231580 Gak ucggguuuuccucuUAAGAAAc ||||||| caggguuguuucauAUUCUUUa 2 9 760 781 [mm9:5:109009119-109009140:-] 0.5014 140 7 -5.95 -1.1608 MIMAT0000236 mmu-miR-203 231580 Gak gaucaccaggaUUUGUAAAGUg ||||||||:| uuuaauuuuaaAAACAUUUUAa 2 12 597 618 [mm9:5:109009282-109009303:-] 0.5014 139 0 -8.34 -0.1581 MIMAT0000247 mmu-miR-143 231580 Gak cuCGAU-GUCAC-GA-AGUAGAGu |:|: | || || ||||||| ggGUUGUCUCUGCCUCUCAUCUCc 2 20 55 78 [mm9:5:108999069-108999092:-] 0.4467 144 7 -15.63 -0.1063 MIMAT0000247 mmu-miR-143 231580 Gak cucgauGUC--ACG--AAGUAGAgu ||| ||| |||||| ucugauCAGUUUGCCAAUCAUCUgu 3 16 384 408 [mm9:5:108998466-108998490:-] 0.6309 121 0 -11.23 -0.1043 MIMAT0000248 mmu-miR-30e 231580 Gak gaaggUCAGUUCC-UACAAAUGu || ||:|| ||||||| ggaugAGGCAGGGCUUGUUUACa 2 18 62 84 [mm9:5:109009816-109009838:-] 0.5007 156 7 -17.92 -0.2158 MIMAT0000248 mmu-miR-30e 231580 Gak gaaggucaguuccuACAAAUGu ||||||| ucaauugcccuguuUGUUUACc 2 9 271 292 [mm9:5:109009608-109009629:-] 0.5010 140 7 -8.47 -0.7463 MIMAT0000248 mmu-miR-30e 231580 Gak gaaGGUCAGUUCCUACA-AAUGu :||| |||| ||| |||| cccUCAG-AAAGGCUGUGUUACa 2 20 330 351 [mm9:5:109009549-109009570:-] 0.5003 125 0 -15.48 -0.1143 MIMAT0000514 mmu-miR-30c 231580 Gak cgaCU-CUCACAUCCU--ACAAAUGu || ||| | |||: ||||||| gagGAUGAG-GCAGGGCUUGUUUACa 2 21 60 84 [mm9:5:109009816-109009840:-] 0.5007 152 7 -19.41 -0.2238 MIMAT0000514 mmu-miR-30c 231580 Gak cgacucucacauccuACAAAUGu ||||||| aucaauugcccuguuUGUUUACc 2 9 270 292 [mm9:5:109009608-109009630:-] 0.5010 140 7 -8.24 -0.7389 MIMAT0000515 mmu-miR-30d 231580 Gak gaaggUCAG-CCCCUACAAAUGu || | ||| ||||||| ggaugAGGCAGGGCUUGUUUACa 2 18 62 84 [mm9:5:109009816-109009838:-] 0.5007 152 7 -17.51 -0.2177 MIMAT0000515 mmu-miR-30d 231580 Gak gaaggucagccccuACAAAUGu ||||||| ucaauugcccuguuUGUUUACc 2 9 271 292 [mm9:5:109009608-109009629:-] 0.5010 140 7 -8.47 -0.7463 MIMAT0000532 mmu-miR-23a 231580 Gak ccuuuagggaccguUACACUa |||||| augcccuauugaucAUGUGAa 2 8 374 394 [mm9:5:109009506-109009526:-] 0.5003 120 6 -12.15 -0.1214 MIMAT0000582 mmu-miR-338-3p 231580 Gak guUGUUU-UAGUGA-CUA-CGACCu ||||| | ||:| || ||||| ggACAAAUACCAUUCCAUGGCUGGg 2 21 425 449 [mm9:5:108998698-108998722:-] 0.4151 126 0 -16.55 -0.2435 MIMAT0000582 mmu-miR-338-3p 231580 Gak guUGUUUU-AGUGACUACG-ACCu |:::|: | | |||||| ||| ucAUGGAGCUGAAUGAUGCAUGGu 2 21 212 235 [mm9:5:108998912-108998935:-] 0.7734 123 0 -13.37 -0.6676 MIMAT0000582 mmu-miR-338-3p 231580 Gak guUGUUU-UAGUGA-CUA-CGACCu ||||| | ||:| || ||||| ggACAAAUACCAUUCCAUGGCUGGg 2 21 152 176 [mm9:5:108998698-108998722:-] 0.4151 126 0 -16.55 -0.2820 MIMAT0000582 mmu-miR-338-3p 231580 Gak guuguuUUAGUGACUA-CGACCu | |: ||||| ||||| uaaacuAUUUUCUGAUGGCUGGu 2 17 416 438 [mm9:5:108998436-108998458:-] 0.6150 124 0 -17.01 -0.6252 MIMAT0000659 mmu-miR-212 231580 Gak acCGGCACUGACCU-CU-GACAAu ||: ||:||| | || ||||| ugGCUAUGGCUGCAGGAGCUGUUc 2 21 10 33 [mm9:5:108998841-108998864:-] 0.3038 131 0 -23.83 -0.2111 MIMAT0000661 mmu-miR-214 231580 Gak ugacggaCAGACACGGACGACa | || | ||||||| ccuagggGCCUUUUCCUGCUGg 2 16 77 98 [mm9:5:108999049-108999070:-] 0.4604 151 7 -18.06 -0.2709 MIMAT0000678 mmu-miR-7b 231580 Gak ugUUGUUUUAGUGU-UCAGA-AGGu | :: :| ||:| ||||| ||| caAUUGUGACCAUAGAGUCUCUCCa 2 22 21 45 [mm9:5:109009855-109009879:-] 0.4918 120 0 -14.90 -0.1662 MIMAT0000748 mmu-miR-383 231580 Gak ucGGUGUCAGUGGAAGACUAGa ||||| || : ||||||| auCCACA-UCCUACUCUGAUCa 2 21 644 664 [mm9:5:108998483-108998503:-] 0.5008 158 7 -19.90 -0.5777 MIMAT0000748 mmu-miR-383 231580 Gak ucGGUGUCAGUGGAAGACUAGa ||||| || : ||||||| auCCACA-UCCUACUCUGAUCa 2 21 371 391 [mm9:5:108998483-108998503:-] 0.5008 158 7 -19.90 -0.6522 MIMAT0000748 mmu-miR-383 231580 Gak ucGGUGUCAGUGGAAGACUAGa :::| | ||| |||||||| ucUUGCUGGCACAUUCUGAUCc 2 21 457 478 [mm9:5:109009422-109009443:-] 0.5014 164 7 -15.49 -0.5366 MIMAT0004745 mmu-miR-384-5p 231580 Gak uguAACGGAUCCUUAACA-AAUGu || |||: :: ||| |||| ccuUUUCCUGCUGGCUGUAUUACa 2 21 85 108 [mm9:5:108999039-108999062:-] 0.4449 120 0 -11.86 -0.2654 MIMAT0004745 mmu-miR-384-5p 231580 Gak uguaacggaUCCUUAACAAAUGu |||: |||||||| ggaugaggcAGGGCUUGUUUACa 2 15 62 84 [mm9:5:109009816-109009838:-] 0.5007 158 7 -17.48 -0.2197 MIMAT0004745 mmu-miR-384-5p 231580 Gak ugUAACGGAUCCUUAACAAAUGu |||||| | |||||||| caAUUGCCCUG--UUUGUUUACc 2 22 272 292 [mm9:5:109009608-109009628:-] 0.5010 158 7 -15.42 -0.7426 MIMAT0004750 mmu-miR-425 231580 Gak agUUGCCCUCAC----UA-GCACAGUAa || || ||| || :||||||| agAAAGGCUGUGUUACAUGUGUGUCAUg 2 22 335 362 [mm9:5:109009538-109009565:-] 0.5003 147 7 -16.56 -0.1851 MIMAT0001533 mmu-miR-448 231580 Gak uaCCCUGUAGGAUGUA-UACGUu || ||| | | ||| ||||| uuGGCACA-CGU-CAUGAUGCAu 2 21 671 691 [mm9:5:109009209-109009229:-] 0.5014 120 0 -12.23 -0.4292 MIMAT0003112 mmu-miR-489 231580 Gak cgACGGUAUAUACACCACAGUAa ||: || |||| ||||||| gcUGUGUUACAUGU-GUGUCAUg 2 22 341 362 [mm9:5:109009538-109009559:-] 0.5003 163 7 -18.81 -0.1656 MIMAT0003172 mmu-miR-542-3p 231580 Gak aaagucaauaGU-UAGACAGUGu || | ||||||| auauuccuucCACAGCUGUCACa 2 13 526 548 [mm9:5:108998599-108998621:-] 0.5199 143 7 -15.60 -0.7402 MIMAT0003172 mmu-miR-542-3p 231580 Gak aaAGUCAAUAG-UUA--GACAGUGu |::| |:|| ::| ||||||| acUUGG-UGUCUGGUGGCUGUCACc 2 21 287 310 [mm9:5:108998564-108998587:-] 0.5092 144 7 -13.18 -0.1004 MIMAT0003172 mmu-miR-542-3p 231580 Gak aaagucaauaGU-UAGACAGUGu || | ||||||| auauuccuucCACAGCUGUCACa 2 13 253 275 [mm9:5:108998599-108998621:-] 0.5199 143 7 -15.60 -0.7989 MIMAT0003893 mmu-miR-761 231580 Gak acacagucaaAGUGGGACGACg |: :||||||| ccuaggggccUUUUCCUGCUGg 2 13 77 98 [mm9:5:108999049-108999070:-] 0.4604 144 7 -15.69 -0.2686 MIMAT0003456 mmu-miR-495 231580 Gak uucUUCACGUGGUACAAACAAa || ||| || |||||||| aucAAUUGC-CC-UGUUUGUUu 2 20 270 289 [mm9:5:109009611-109009630:-] 0.5010 159 7 -15.17 -0.6347 MIMAT0003475 mmu-miR-146b 231580 Gak ucgGAUACCUUAAGUCAAGAGu :|| | || ||||||| gugUUA-GCCAUAGAGUUCUCu 2 20 118 138 [mm9:5:109009762-109009782:-] 0.5004 145 7 -12.22 -0.4034 MIMAT0004847 mmu-miR-882 231580 Gak ugauUAC-GCGAUUG---AGAGAGGa ||| ||||::| ||||||| gcacAUGUCGCUGGCACUUCUCUCCu 2 19 593 618 [mm9:5:108998529-108998554:-] 0.4569 156 7 -24.79 -0.3138 MIMAT0004847 mmu-miR-882 231580 Gak ugauUAC-GCGAUUG---AGAGAGGa ||| ||||::| ||||||| gcacAUGUCGCUGGCACUUCUCUCCu 2 19 320 345 [mm9:5:108998529-108998554:-] 0.4569 156 7 -24.79 -0.3580 MIMAT0004847 mmu-miR-882 231580 Gak ugAUUAC-GCGAU-UGAGAGAGGa | :|| | || | ||||||| aaUUGUGACCAUAGAGUCUCUCCa 2 21 22 45 [mm9:5:109009855-109009878:-] 0.4918 146 7 -16.53 -0.2182 MIMAT0004853 mmu-miR-874 231580 Gak agccaGGGAGCCCG--GUCCCGUc ||| | ||| ||||||| cauugCCCACAGGCCACAGGGCAg 2 18 160 183 [mm9:5:108998964-108998987:-] 0.5692 156 7 -28.00 -0.1329 MIMAT0004854 mmu-miR-876-5p 231580 Gak auCACUAAGUGU---CUCUU-UAGGu || :||||:| | ||| |||| gaGUUGUUCAUAUUUGUGAACAUCCa 2 21 402 427 [mm9:5:109009473-109009498:-] 0.5008 123 0 -15.53 -0.6788 MIMAT0004889 mmu-miR-504 231580 Gak cuaUCUCACGUCUGGUCCC-AGa || || | ||||||| || cugAGUUUGAAAACCAGGGCUCg 2 20 236 258 [mm9:5:108998889-108998911:-] 0.7734 127 0 -18.06 -0.3428 MIMAT0004896 mmu-miR-590-3p 231580 Gak ugAUCGAA---UAUGU---AUUUUAAu || :|| | ||| ||||||| uuUAAUUUUAAAAACAUUUUAAAAUUu 2 20 597 623 [mm9:5:109009277-109009303:-] 0.5014 141 7 -4.19 -1.1944 MIMAT0004936 mmu-miR-873 231580 Gak uccucUGAGUGUUCAAGGACg ::|:|||:||||||| ggcuuGUUUACAGGUUCCUGu 2 17 73 93 [mm9:5:109009807-109009827:-] 0.5007 164 7 -22.83 -0.2610 MIMAT0005850 mmu-miR-1192 231580 Gak uuaaaccagacaaACAAACAAa |||||||| uaaucaauugcccUGUUUGUUu 2 10 268 289 [mm9:5:109009611-109009632:-] 0.5010 145 7 -14.02 -0.6459 MIMAT0005850 mmu-miR-1192 231580 Gak uuAAACCAGACAAAC-AAACAAa | ||| || |||| |||||| guUGUGGGCUUUUUGUUUUGUUu 2 21 733 755 [mm9:5:109009145-109009167:-] 0.5014 140 6 -13.47 -0.7387

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G041968 Gak Mus musculus 231580 19536157 0 0 R51710; MOUSE$GAK_01; Binding factors: mmu-miR-124-3p // 0 0 R51724; MOUSE$GAK_02; Binding factors: mmu-miR-181a-5p , mmu-miR-181b-5p , mmu-miR-181c-3p , mmu-miR-181d-5p , mmu-miR-543-3p // 0 0 R51725; MOUSE$GAK_03; Binding factors: mmu-miR-193a-3p , mmu-miR-193b-3p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Gak mmu-miR-704 beg:312 end:329 pic:3' GATCCTCGTCTCGTGTACAGA 5'& ||| .||||||||| &5' ---GGAT---GGCACATGTC- 3' Gak mmu-miR-464 beg:279 end:295 pic:3' ATAGAGTGTCTTATTTGAACCAT 5'& .|| |||||||. &5' ----------GATTTACTTGGTG 3' Gak mmu-miR-103 beg:36 end:53 pic:3' AGTATCGGGACATGTTACGACGA 5'& .|||| ||||||||| &5' ------TCCTG---AATGCTGCT 3' Gak mmu-miR-107 beg:36 end:53 pic:3' ACTATCGGGACATGTTACGACGA 5'& .|||| ||||||||| &5' ------TCCTG---AATGCTGCT 3' Gak mmu-miR-412 beg:82 end:99 pic:3' GCCGATCACCTGGTCCACTT 5'& ||. |||| ||||||| &5' -GGT--GTGG--CAGGTGA- 3' Gak mmu-miR-1983 beg:83 end:99 pic:3' TCTTTTGTACGAGGTCCACTC 5'& .||. ||||||| &5' -------GTGTGGCAGGTGA- 3' Gak mmu-miR-331-3p beg:94 end:114 pic:3' AAGATCCTATC-C-GGGTCCCCG 5'& |||| | ||||||||| &5' ------GATATCGCCCCAGGGGC 3' Gak mmu-miR-695 beg:117 end:135 pic:3' AAGTCAGTGGATACGGGTTAGA 5'& ||.||| ||||||| &5' ------CATCTACTCCCAATC- 3' Gak mmu-miR-542-3p beg:262 end:276 pic:3' AAAGTCAATAGTTAGACAGTGT 5'& ||. |||||||| &5' ----------CAG-CTGTCACA 3' Gak mmu-miR-467a beg:320 end:339 pic:3' GCGTATATGTACGT---CCGTGAAT 5'& |||||. ||||||| &5' -------ACATGTCGCTGGCACTT- 3' Gak mmu-miR-290-3p beg:326 end:339 pic:3' CCCGAATTTTGATCCG-CCGTGAAA 5'& || ||||||| &5' --------------GCTGGCACTT- 3' Gak mmu-miR-292-3p beg:326 end:339 pic:3' TGTGAGTTTTGGACCG-CCGTGAAA 5'& || ||||||| &5' --------------GCTGGCACTT- 3' Gak mmu-miR-101b beg:262 end:283 pic:3' AAGTCGATAGTGTCATGACAT 5'& |||||.||||||| .|||. &5' --CAGCTGTCACAGT-TTGTG 3' Gak mmu-miR-106b beg:291 end:315 pic:3' TAGACG--TGACAGTCGTGAAAT 5'& .|||| .|||||| | ||| &5' GTCTGGTGGCTGTCACCTCTT-- 3' Gak mmu-miR-1274a beg:99 end:118 pic:3' ACCGCGGACTTGTCCCTGGACT 5'& |||| |||||.||||. &5' ---CGCCC---CAGGGGCCTGG 3' Gak mmu-miR-150 beg:164 end:180 pic:3' GTGACCATGTTCCCAACCCTCT 5'& || || ||||||| &5' --------CAT-GGCTGGGAGA 3' Gak mmu-miR-150star beg:213 end:236 pic:3' GATAGGGGGTCC-GGACATGGTC 5'& |. |. |.|||||||| &5' ---TTTTCTTTTTCTTGTACCAG 3' Gak mmu-miR-15a beg:31 end:54 pic:3' GTGTTTGGTAATACACGACGAT 5'& || ||.| |||||||. &5' CATGAATCCTGAA-TGCTGCTG 3' Gak mmu-miR-15b beg:32 end:54 pic:3' ACATTTGGTACTACACGACGAT 5'& |.||.| ||| |||||||. &5' --TGAATCCTGAA-TGCTGCTG 3' Gak mmu-miR-17star beg:9 end:25 pic:3' GATGTTCACGGGAGTGACGTCA 5'& ||. | .|||||| &5' --------GCTATGGCTGCAG- 3' Gak mmu-miR-182 beg:381 end:401 pic:3' GCCACACTCAAGA-TGGT--AACGGTTT 5'& ||| |.|| ||||||| &5' ----------TCTGATCAGTTTGCCAA- 3' Gak mmu-miR-1902 beg:320 end:341 pic:3' TTCAGTACGGATGA-CGTGGAGA 5'& ||||.| .|| ||||.||| &5' ----CATGTC-GCTGGCACTTCT 3' Gak mmu-miR-1907 beg:35 end:53 pic:3' TGGAGGTCTAGGAG--ACGACGAG 5'& ||||| ||||||| &5' --------ATCCTGAATGCTGCT- 3' Gak mmu-miR-1936 beg:189 end:210 pic:3' CGGTCAAGTGTCGTCCAGTCAAT 5'& .||| || | ||.||||. &5' -TCAGATCT--GAT-GTTAGTTG 3' Gak mmu-miR-1940 beg:332 end:358 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& ||| |||. ||| ||| |.||.|| &5' -ACTTCTCT-CCTG-TCATTTCTTCA- 3' Gak mmu-miR-1948 beg:38 end:60 pic:3' GACATGCTCACGAGACGGATTT 5'& ||| |.| |||| ||||.| &5' CTGAATGC-TGCTG-GCCTGA- 3' Gak mmu-miR-195 beg:38 end:54 pic:3' CGGTTATAAAGAC--ACGACGAT 5'& ||| |||||||. &5' ----------CTGAATGCTGCTG 3' Gak mmu-miR-1956 beg:98 end:120 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& .||| | .| ||||||| &5' -TCGCCC-CAGGGGCCTGGAC- 3' Gak mmu-miR-1968 beg:254 end:272 pic:3' TCAGGTGGTAGGAAT-TGTCGACGT 5'& ||||| |||||||. &5' ---------TCCTTCCACAGCTGT- 3' Gak mmu-miR-206 beg:152 end:169 pic:3' GGTGTGTGAAGGAATGTAAGGT 5'& || |.|| ||||||| &5' -CAAATAC-------CATTCCA 3' Gak mmu-miR-206 beg:247 end:260 pic:3' GGTGTGTGAAGGAATGTAAGGT 5'& .|||.||||| &5' -----------TTTATATTCC- 3' Gak mmu-miR-20bstar beg:5 end:25 pic:3' GATCTTCACGAGTGTGACGTCA 5'& || ||| .|||||| &5' ---GATG-GCTATGGCTGCAG- 3' Gak mmu-miR-2140 beg:122 end:146 pic:3' TGGTGGTTCTA---GACGTGGA 5'& || |||| |||||.. &5' ACTCCCAATCATCCCTGCATT- 3' Gak mmu-miR-218 beg:49 end:71 pic:3' TGTACCAATCT-AGTTCGTGTT 5'& .| ||| || | |.|||||| &5' GC-TGGCCTGACTGAGGCACAA 3' Gak mmu-miR-26a beg:272 end:293 pic:3' TCGGATAGGACCTAATGAACTT 5'& ||..|. || |||||||. &5' AGTTTG---TGATTTACTTGG- 3' Gak mmu-miR-26b beg:275 end:293 pic:3' TGGATAGGACTTAATGAACTT 5'& |. ||| |||||||. &5' -----TTGTGATTTACTTGG- 3' Gak mmu-miR-28star beg:258 end:283 pic:3' AGGTCGTCG--AGTGTTAGATCAC 5'& |||| |||| |||||.|.| ||| &5' TCCA-CAGCTGTCACAGTTT-GTG 3' Gak mmu-miR-291a-3p beg:317 end:339 pic:3' CGTGTGTTTCACCTTCGTGAAA 5'& |||||.. .|||||| &5' GCACATGTCGCT--GGCACTT- 3' Gak mmu-miR-294 beg:319 end:339 pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& .|||| .|||||| &5' --GCACATGTCGCTGGCACTT- 3' Gak mmu-miR-295 beg:317 end:339 pic:3' TCTGAGTTTTCATC-ATCGTGAAA 5'& |.| || || | |.|||||| &5' -GGCACAT--GTCGCTGGCACTT- 3' Gak mmu-miR-296-5p beg:106 end:116 pic:3' TGTCCTAACTCCCCCCCGGGA 5'& ||||||. &5' -------------GGGGCCT- 3' Gak mmu-miR-299 beg:361 end:379 pic:3' TTCGCCAAATGGCAGGGTGTAT 5'& || ||| .|||||| &5' ----GGGGTACA--TCCACAT- 3' Gak mmu-miR-302a beg:319 end:339 pic:3' AGTGGTTTTGTACCT---TCGTGAAT 5'& ||||| .|||||| &5' --------ACATGTCGCTGGCACTT- 3' Gak mmu-miR-302c beg:168 end:189 pic:3' GGTGACTTTGTACCTTCGTGAA 5'& .||| | | |||||.| &5' --GCTGGGAGAGA-AAGCATT- 3' Gak mmu-miR-302d beg:319 end:339 pic:3' TGTGAGTTTGTACCT---TCGTGAAT 5'& ||||| .|||||| &5' --------ACATGTCGCTGGCACTT- 3' Gak mmu-miR-3099 beg:37 end:59 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& |||. ||. || ||.||||. &5' TCCTGAATG-CTG-CTGGCCTG 3' Gak mmu-miR-30bstar beg:360 end:383 pic:3' CTGCATTTGTAGGTGTAGGGTC 5'& |. | ||||||||||||.| &5' GGGGGT-ACATCCACATCCTA- 3' Gak mmu-miR-322 beg:36 end:54 pic:3' AGGTTTTGTACTTAACGACGAC 5'& ||| |||| |||||||| &5' TCC------TGAA-TGCTGCTG 3' Gak mmu-miR-327 beg:339 end:359 pic:3' TAGG--AGTACGGGGAGTTCA 5'& ||| |||| ..|.|||| &5' -TCCTGTCAT-TTCTTCAA-- 3' Gak mmu-miR-3473 beg:326 end:345 pic:3' CCGACTCGGT-AGAGAGGT 5'& |||| || ||||||| &5' -GCTG-GCACTTCTCTCC- 3' Gak mmu-miR-3473 beg:298 end:315 pic:3' CCGACTCGGTAGAGAGGT 5'& |||| |.|| ||||. &5' GGCT--GTCACCTCTT-- 3' Gak mmu-miR-361 beg:183 end:203 pic:3' CATGGGGACCTCTAAGACTATT 5'& |..||| ||| ||||||. &5' --ATTCCTC-AGA-TCTGATG- 3' Gak mmu-miR-361 beg:285 end:302 pic:3' CATGGGGACCTCTAAGACTATT 5'& |.||| ||||.|. &5' -----CTTGGTG--TCTGGTG- 3' Gak mmu-miR-383 beg:370 end:391 pic:3' TCGGTGTCAGTGGA--AGACTAGA 5'& ||||| ||| ||||||| &5' --CCACAT---CCTACTCTGATC- 3' Gak mmu-miR-433 beg:16 end:38 pic:3' TGTGGC-TCCTCGGGTAGTACTA 5'& .|.| ||||||. |||||| &5' --GCTGCAGGAGCTGTTCATGA- 3' Gak mmu-miR-433 beg:131 end:154 pic:3' TGTGGCTCCTCGG--GTAGTACTA 5'& ||.| || |||||||. &5' -CATCCCT--GCATTCATCATGG- 3' Gak mmu-miR-465a-3p beg:380 end:391 pic:3' AGATGAATCTTTCCGGGACTAG 5'& |.|||||| &5' --------------CTCTGATC 3' Gak mmu-miR-465b-3p beg:380 end:391 pic:3' AGATGAATCTTTCCGGGACTAG 5'& |.|||||| &5' --------------CTCTGATC 3' Gak mmu-miR-465c-3p beg:380 end:391 pic:3' AGATGAATCTTTCCGGGACTAG 5'& |.|||||| &5' --------------CTCTGATC 3' Gak mmu-miR-466g beg:389 end:410 pic:3' ACACACACGTACAC-AGACATA 5'& || ||| |||||| &5' ---GTTTGCCAATCATCTGTA- 3' Gak mmu-miR-497 beg:31 end:54 pic:3' ATGTTTGGTGTCACACGACGAC 5'& | ||.| | | |||||||| &5' -ATGAATC-CTGAATGCTGCTG 3' Gak mmu-miR-503star beg:80 end:103 pic:3' GGTCCGTCACC-TTTGTTATGAG 5'& ||||. |||| |.. ||| || &5' -CAGGT-GTGGCAGGTGATA-TC 3' Gak mmu-miR-505 beg:228 end:251 pic:3' TCTTTTGGTCG----TTCACAACTGC 5'& ||||| |||||||||. &5' -----ACCAGAGGAAAAGTGTTGAT- 3' Gak mmu-miR-544 beg:9 end:27 pic:3' CTCGAACGATTTTTACGTCTTA 5'& |||| . |||||.| &5' ------GCTATGGCTGCAGGA- 3' Gak mmu-miR-665 beg:295 end:317 pic:3' TCC-CTGG-AGTCGGAGGACCA 5'& || |.|. ||| ||||.||| &5' -GGTGGCTGTCA-CCTCTTGG- 3' Gak mmu-miR-667 beg:285 end:309 pic:3' GAACC-CGACCCACCGTCCACAGT 5'& ||||| |. |||||| ||||| &5' CTTGGTGTCTGGTGGC---TGTCA 3' Gak mmu-miR-684 beg:166 end:186 pic:3' AACTGAACTTCCCTTTTGA 5'& ||.|| |.|| ||||.| &5' -TGGCTGGGAGAGAAAGC- 3' Gak mmu-miR-688 beg:0 end:10 pic:3' CTTATTCATCAGCGGACGCT 5'& |||||.|| &5' ------------GCCTGTGA 3' Gak mmu-miR-692 beg:168 end:182 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||| ..||||| &5' ---------GCTGGGAGAGA- 3' Gak mmu-miR-743a beg:200 end:221 pic:3' AGATGAGTCGAACC-ACAGAAAG 5'& |.||.| |||.|||| &5' -----TTAGTTGTTTTGTTTTTC 3' Gak mmu-miR-743b-3p beg:200 end:221 pic:3' AGATAAGTCGTACT-ACAGAAAG 5'& |.||. |||.|||| &5' -----TTAGTTGTTTTGTTTTTC 3' Gak mmu-miR-744 beg:125 end:144 pic:3' ACGACAATCGGGATC---GGGGCGT 5'& ||| |||.||| &5' ---------CCCAATCATCCCTGCA 3' Gak mmu-miR-758 beg:262 end:277 pic:3' ATCACCTGGTC--CAGTGTTT 5'& ||| ||||||. &5' --------CAGCTGTCACAG- 3' Gak mmu-miR-760 beg:101 end:121 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& ||||| .|.|| || || &5' -CCCCAGGGGCCTGGA-CC- 3' Gak mmu-miR-882 beg:325 end:346 pic:3' TGATTAC-GCGATTG---AGAGAGGA 5'& | ||||..| |||||||| &5' ------GTCGCTGGCACTTCTCTCCT 3' Gak mmu-miR-185 beg:326 end:345 pic:3' AGTCCTTGACGGA-AAGAGAGGT 5'& .||| | |||||||| &5' ------GCTGGCACTTCTCTCC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Gak RAID00083072 mmu-miR-132-3p miRNA MIMAT0000144 Gak mRNA 231580 Prediction 0.1828 Gak RAID00093170 mmu-miR-30d-5p miRNA MIMAT0000515 Gak mRNA 231580 Prediction 0.1828 Gak RAID00106904 mmu-miR-1192 miRNA MIMAT0005850 Gak mRNA 231580 Prediction 0.1828 Gak RAID00167643 mmu-miR-23a-3p miRNA MIMAT0000532 Gak mRNA 231580 Prediction 0.1828 Gak RAID00175100 mmu-miR-3064-3p miRNA MIMAT0014835 Gak mRNA 231580 Prediction 0.1828 Gak RAID00235080 mmu-miR-761 miRNA MIMAT0003893 Gak mRNA 231580 Prediction 0.1828 Gak RAID00263867 mmu-miR-448-3p miRNA MIMAT0001533 Gak mRNA 231580 Prediction 0.1828 Gak RAID00287884 mmu-miR-5616-5p miRNA MIMAT0022359 Gak mRNA 231580 Prediction 0.1828 Gak RAID00309471 mmu-miR-590-3p miRNA MIMAT0004896 Gak mRNA 231580 Prediction 0.1828 Gak RAID00481447 mmu-miR-695 miRNA MIMAT0003481 Gak mRNA 231580 Prediction 0.1828 Gak RAID00816352 mmu-miR-214-3p miRNA MIMAT0000661 Gak mRNA 231580 Prediction 0.1828 Gak RAID00827521 mmu-miR-882 miRNA MIMAT0004847 Gak mRNA 231580 Prediction 0.1828 Gak RAID00917583 mmu-miR-669e-3p miRNA MIMAT0017330 Gak mRNA 231580 Prediction 0.1828 Gak RAID00999115 mmu-miR-146b-5p miRNA MIMAT0003475 Gak mRNA 231580 Prediction 0.1828 Gak RAID01010973 mmu-miR-343 miRNA MIMAT0004868 Gak mRNA 231580 Prediction 0.1828 Gak RAID01061034 mmu-miR-337-3p miRNA MIMAT0000578 Gak mRNA 231580 Prediction 0.1828 Gak RAID01076216 mmu-miR-7b-5p miRNA MIMAT0000678 Gak mRNA 231580 Prediction 0.1828 Gak RAID01171969 mmu-miR-489-3p miRNA MIMAT0003112 Gak mRNA 231580 Prediction 0.1828 Gak RAID01413599 mmu-miR-338-3p miRNA MIMAT0000582 Gak mRNA 231580 Prediction 0.1828 Gak RAID01634475 mmu-miR-876-5p miRNA MIMAT0004854 Gak mRNA 231580 Prediction 0.1828 Gak RAID01684634 mmu-miR-30e-5p miRNA MIMAT0000248 Gak mRNA 231580 Prediction 0.1828 Gak RAID01901910 mmu-miR-873a-5p miRNA MIMAT0004936 Gak mRNA 231580 Prediction 0.1828 Gak RAID01989083 mmu-miR-7005-3p miRNA MIMAT0027915 Gak mRNA 231580 Prediction 0.1828 Gak RAID02093098 mmu-miR-185-5p miRNA MIMAT0000214 Gak mRNA 231580 Prediction 0.1828 Gak RAID02176264 mmu-miR-6995-5p miRNA MIMAT0027892 Gak mRNA 231580 Prediction 0.1828 Gak RAID02374931 mmu-miR-23b-3p miRNA MIMAT0000125 Gak mRNA 231580 Prediction 0.1828 Gak RAID02531552 mmu-miR-383-5p miRNA MIMAT0000748 Gak mRNA 231580 Prediction 0.1828 Gak RAID02632653 mmu-miR-495-3p miRNA MIMAT0003456 Gak mRNA 231580 Prediction 0.1828 Gak RAID02660196 mmu-miR-467a-5p miRNA MIMAT0003409 Gak mRNA 231580 Prediction 0.1828 Gak RAID02711227 mmu-miR-384-5p miRNA MIMAT0004745 Gak mRNA 231580 Prediction 0.1828 Gak RAID02726052 mmu-miR-425-5p miRNA MIMAT0004750 Gak mRNA 231580 Prediction 0.1828 Gak RAID02832815 mmu-miR-182-5p miRNA MIMAT0000211 Gak mRNA 231580 Prediction 0.1828 Gak RAID02844902 mmu-let-7a-2-3p miRNA MIMAT0017015 Gak mRNA 231580 Prediction 0.1828 Gak RAID02879497 mmu-miR-504-5p miRNA MIMAT0004889 Gak mRNA 231580 Prediction 0.1828 Gak RAID02937087 mmu-miR-30b-5p miRNA MIMAT0000130 Gak mRNA 231580 Prediction 0.1828 Gak RAID02988367 mmu-miR-146a-5p miRNA MIMAT0000158 Gak mRNA 231580 Prediction 0.1828 Gak RAID03050558 mmu-miR-30c-5p miRNA MIMAT0000514 Gak mRNA 231580 Prediction 0.1828 Gak RAID03160925 mmu-miR-143-3p miRNA MIMAT0000247 Gak mRNA 231580 Prediction 0.1828 Gak RAID03192500 mmu-miR-186-5p miRNA MIMAT0000215 Gak mRNA 231580 Prediction 0.1828 Gak RAID03217695 mmu-miR-874-3p miRNA MIMAT0004853 Gak mRNA 231580 Prediction 0.1828 Gak RAID03315430 mmu-miR-542-3p miRNA MIMAT0003172 Gak mRNA 231580 Prediction 0.2381 Gak RAID03322791 mmu-miR-212-3p miRNA MIMAT0000659 Gak mRNA 231580 Prediction 0.1828 Gak RAID03451719 mmu-miR-667-5p miRNA MIMAT0017239 Gak mRNA 231580 Prediction 0.1828 Gak RAID03719028 mmu-miR-677-5p miRNA MIMAT0003451 Gak mRNA 231580 Prediction 0.1828 Gak RAID03890740 mmu-miR-30a-5p miRNA MIMAT0000128 Gak mRNA 231580 Prediction 0.1828 Gak RAID03942395 mmu-miR-203-3p miRNA MIMAT0000236 Gak mRNA 231580 Prediction 0.1828 Gak RAID03955107 mmu-miR-183-5p miRNA MIMAT0000212 Gak mRNA 231580 Prediction 0.1828 Gak RAID03987715 mmu-miR-6983-5p miRNA MIMAT0027868 Gak mRNA 231580 Prediction 0.1828