DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000550 rno-miR-323 312154 Ing3 ucuccagcuggcacAUUACAc |||||| gaguuguauuuuaaUAAUGUa 2 8 156 176 [rn4:4:48280458-48280478:+] 0.7067 120 6 -6.12 -0.5048 MIMAT0000561 rno-miR-327 312154 Ing3 uggGAGUACGGGGAGUUcc :|::| |:|||||| acaUUUGUACUCCUCAAcc 3 17 259 277 [rn4:4:48280561-48280579:+] 0.7067 136 0 -12.31 -0.1616 MIMAT0004645 rno-miR-148b-5p 312154 Ing3 ggacucacauauuguCUUGAAg |||||| auccuauaagaucuuGAACUUg 2 8 126 147 [rn4:4:48280428-48280449:+] 0.7067 120 6 -6.78 -0.3177 MIMAT0000604 rno-miR-350 312154 Ing3 cacUUUCACAUACCCGAAACACUu ||: | |:| |||||||| aauAAGCUUUGU-UUCUUUGUGAa 2 22 514 536 [rn4:4:48280816-48280838:+] 0.7428 151 7 -12.26 -1.1819 MIMAT0000604 rno-miR-350 312154 Ing3 cacUUUCACAUA-CCCGAAACACuu || |||| | :|||||| ccaAAUGUGUUUAUUUUUUUGUGcg 3 22 750 774 [rn4:4:48281052-48281076:+] 0.7428 132 0 -10.17 -0.2673 MIMAT0000607 rno-miR-7a* 312154 Ing3 uaccGUCUGACACUAAACAAca :| | | | |||||| ccuuUAUAAUAAGCUUUGUUuc 3 19 507 528 [rn4:4:48280809-48280830:+] 0.7428 126 0 -2.27 -0.1073 MIMAT0000613 rno-miR-151 312154 Ing3 ugaUCUG-ACACUCGAGGAGcu |||| | || |||||| ugcAGACAUUUGUACUCCUCaa 3 19 254 275 [rn4:4:48280556-48280577:+] 0.7067 137 0 -15.10 -0.1595 MIMAT0004705 rno-let-7b* 312154 Ing3 ccCUUCCGUCAUCCAACAUAuc ||| : |: ||||||| uuGAAUUUUAUGAGUUGUAUuu 3 21 145 166 [rn4:4:48280447-48280468:+] 0.7067 132 0 -6.85 -0.2515 MIMAT0004705 rno-let-7b* 312154 Ing3 cccuuccgUCAUC-CAACAUAuc | |:| |||||| auccuuaaAUUGGAAUUGUAUua 3 15 779 801 [rn4:4:48281081-48281103:+] 0.7428 121 0 -5.61 -0.1185 MIMAT0004705 rno-let-7b* 312154 Ing3 cccuuccgucauccaACAUAUc |||||| gcuguuauguuacacUGUAUAu 2 8 397 418 [rn4:4:48280699-48280720:+] 0.7067 120 6 -3.55 -0.2038 MIMAT0004708 rno-miR-9* 312154 Ing3 ugaAAGCCAAUA--GAUCGAAAUa | | |||| : ||||||: agaUGCCUUUAUAAUAAGCUUUGu 2 20 502 525 [rn4:4:48280804-48280827:+] 0.7428 130 0 -8.56 -0.2016 MIMAT0004709 rno-miR-10a-3p 312154 Ing3 auaagGGGAUCUAUGCUUAAAc :|:|: | :|||||| uaagaUCUUGAACUUGAAUUUu 2 18 132 153 [rn4:4:48280434-48280455:+] 0.7067 133 6 -8.59 -0.2245 MIMAT0004709 rno-miR-10a-3p 312154 Ing3 auaagGGGAUCUAUGCUUAAAc :::|| : | |||||| gaagaUUUUAAGAAAGAAUUUu 2 18 333 354 [rn4:4:48280635-48280656:+] 0.7067 121 6 -5.95 -0.3016 MIMAT0004711 rno-miR-21* 312154 Ing3 cugucggguagcugaCGACAAc |||||| guacuguacuccagaGCUGUUa 2 8 382 403 [rn4:4:48280684-48280705:+] 0.7067 120 6 -11.51 -0.1055 MIMAT0004723 rno-miR-34c* 312154 Ing3 ggaccgacacaccaaUCACUAa |||||| gggaaagggcguuaaAGUGAUa 2 8 718 739 [rn4:4:48281020-48281041:+] 0.7428 120 6 -11.36 -0.1512 MIMAT0004731 rno-miR-125b* 312154 Ing3 uccAGG--GUUCUCGGAC-UGAACa ||| :|||| |:|| ||||| caaUCCUAUAAGAUCUUGAACUUGa 2 20 124 148 [rn4:4:48280426-48280450:+] 0.7067 130 0 -17.60 -1.3261 MIMAT0000831 rno-miR-126* 312154 Ing3 gcgcaugguuuucAUUAUUAc ||||||| augaguuguauuuUAAUAAUg 2 9 154 174 [rn4:4:48280456-48280476:+] 0.7067 140 7 -9.60 -1.2505 MIMAT0000831 rno-miR-126* 312154 Ing3 gcgcAUGGUUUUCAUUAUUac |:|| | |||||| aagaUGCCUUUA-UAAUAAgc 3 18 501 520 [rn4:4:48280803-48280822:+] 0.7428 123 0 -6.23 -0.2546 MIMAT0004733 rno-miR-136* 312154 Ing3 ucugagUAAACUCUGCUACUac ||| | ||||||| caaagaAUUCCA-ACGAUGAag 3 17 316 336 [rn4:4:48280618-48280638:+] 0.7067 130 0 -12.13 -0.1989 MIMAT0000847 rno-miR-142-5p 312154 Ing3 ucaucacgaaagauGAAAUAc |||||| gguuuuuaagaugcCUUUAUa 2 8 494 514 [rn4:4:48280796-48280816:+] 0.7428 120 6 -5.63 -0.4094 MIMAT0004740 rno-miR-218* 312154 Ing3 gcgccacgaacugucUUGGUAc |||||| acauuuguacuccucAACCAUu 2 8 259 280 [rn4:4:48280561-48280582:+] 0.7067 120 6 -7.67 -0.1259 MIMAT0004741 rno-miR-219-1-3p 312154 Ing3 gcCCUGCAGGUCUGCGUUGAGa ||||| ||| |||||| gaGGACG--AAGAAACAACUCa 2 21 72 91 [rn4:4:48280374-48280393:+] 0.7067 129 6 -20.79 -0.1450 MIMAT0000901 rno-miR-299 312154 Ing3 uacauacacccugCCAUUUGGu |||||||| agaaacuccuguaGGUAAACCc 2 10 615 636 [rn4:4:48280917-48280938:+] 0.7428 145 7 -11.19 -0.6785 MIMAT0001547 rno-miR-450a 312154 Ing3 guaAUCCUUGUGUAGCGUUUUu || ||:: :|:|||||| guaUAUAAAUG-GUUGCAAAAa 2 20 413 433 [rn4:4:48280715-48280735:+] 0.6030 137 6 -9.31 -0.3682 MIMAT0003115 rno-miR-207 312154 Ing3 uuCCCUCCUCUCGGUCCU-CUUCg || | || | | |||| |||| aaGGAACGACA-CGAGGACGAAGa 2 22 60 82 [rn4:4:48280362-48280384:+] 0.7067 123 0 -15.60 -1.0685 MIMAT0003116 rno-miR-501 312154 Ing3 aaAGU-GGGUCCCUGUUUCCUAa ||| :|| || ||||||| agUCAGUCCUUCGAAAAAGGAUu 2 21 463 485 [rn4:4:48280765-48280787:+] 0.7428 155 7 -15.58 -1.0769 MIMAT0003116 rno-miR-501 312154 Ing3 aaAGU--GGGUCC-CUG-----UUUCCUAa ||| :||||| ||| ||||||| acUCAUUUCCAGGCGACCACUUAAAGGAUu 2 21 87 116 [rn4:4:48280389-48280418:+] 0.7067 149 7 -22.70 -1.1320 MIMAT0003177 rno-miR-541 312154 Ing3 ucacacugguuguagUC-UUAGGGAa || |||||:| uuauuuuuuugugcgAGUAAUCCUUa 2 11 760 785 [rn4:4:48281062-48281087:+] 0.7428 125 0 -10.59 -0.1391 MIMAT0004791 rno-miR-379* 312154 Ing3 caaucaccugguacAAUGUAUc ||||||| gaccacuuaaaggaUUACAUAg 2 9 101 122 [rn4:4:48280403-48280424:+] 0.7067 140 7 -13.17 -0.8958 MIMAT0003207 rno-miR-369-3p 312154 Ing3 uuUCUAGUUGGUACAUAAUaa | ||::: ||||||| uuAAAUUGGAAUUGUAUUAgg 3 20 783 803 [rn4:4:48281085-48281105:+] 0.7428 131 0 -4.98 -0.1694 MIMAT0003380 rno-miR-505 312154 Ing3 ccUUUGGUCGUUCACAACUg | |||| | ||||| | uuAUACCA-AAUGUGUUUAu 2 19 745 763 [rn4:4:48281047-48281065:+] 0.7428 120 0 -8.27 -0.1140 MIMAT0005280 rno-miR-743b 312154 Ing3 agAUAAGUCAUACCACAGAAAg |: |: || | || |||| aaUGGUUUUUAAGAUGCCUUUa 2 21 491 512 [rn4:4:48280793-48280814:+] 0.7428 120 0 -4.45 -0.1908 MIMAT0005285 rno-miR-877 312154 Ing3 gggACGCGG-UAGAGGAGAUg || ||: | ||||||| aagUGGGCUGAGGUCCUCUAg 2 18 575 595 [rn4:4:48280877-48280897:+] 0.7428 148 7 -15.38 -0.2308 MIMAT0005301 rno-miR-188 312154 Ing3 gggAGGUGGUACG--UUCCCUAc |:|| || || ||||||| ucaUUCAGCAGGCUGAAGGGAUu 2 19 539 561 [rn4:4:48280841-48280863:+] 0.7428 157 7 -16.52 -0.4584 MIMAT0005308 rno-miR-380 312154 Ing3 gcGUACAAGAU-ACCAGUUGGUa ||| || || | ||||||| gaCAU-UUGUACUCCUCAACCAu 2 21 258 279 [rn4:4:48280560-48280581:+] 0.7067 153 7 -12.90 -0.9178 MIMAT0005330 rno-miR-674-3p 312154 Ing3 aaCAAGAC-UCUACCCUCGACAc || ||| | ||||||| auGUACUGUACUCCAGAGCUGUu 2 21 380 402 [rn4:4:48280682-48280704:+] 0.7067 143 7 -15.83 -1.0479 MIMAT0005330 rno-miR-674-3p 312154 Ing3 aacaagacucuaccCUCGACAc |||:||| aacuugaauuuuauGAGUUGUa 2 9 142 163 [rn4:4:48280444-48280465:+] 0.7067 124 0 -8.78 -0.3282 MIMAT0012824 rno-miR-513 312154 Ing3 uacuuucuGUGGAAGAACACUu ::::| :|||||| auaagcuuUGUUUCUUUGUGAa 2 15 515 536 [rn4:4:48280817-48280838:+] 0.7428 130 6 -12.72 -0.1864 MIMAT0012827 rno-miR-1224 312154 Ing3 gaggUGGAGGGGUCAGGAGUg || |:: :| |||||| gcagACAUUUGUACUCCUCAa 2 18 255 275 [rn4:4:48280557-48280577:+] 0.7067 125 6 -13.51 -0.2021 MIMAT0012828 rno-miR-362 312154 Ing3 uaAGUGUGGA---UC-CAAGGUUCCUAa |:| ||:| || |||||| ||| auUUAAACUUCAAAGAAUUCCAACGAUg 2 23 306 333 [rn4:4:48280608-48280635:+] 0.7067 128 0 -10.81 -0.1111 MIMAT0012831 rno-miR-544 312154 Ing3 cucgAACGAUU-UUUACGUCUua | || || | ||||||| ucugUGGCCAACAUAUGCAGAca 3 19 239 261 [rn4:4:48280541-48280563:+] 0.7067 137 0 -10.57 -0.1996 MIMAT0012832 rno-miR-568 312154 Ing3 caCACAUAUGU--AAAUAUGua ||| ||||| ||||||| aaGUG-AUACAUUUUUAUACca 3 19 732 752 [rn4:4:48281034-48281054:+] 0.7428 143 0 -12.42 -0.2972 MIMAT0012837 rno-miR-632 312154 Ing3 aggccguccUUUGUCUGUg | :|||||| ggccaacauAUGCAGACAu 2 11 244 262 [rn4:4:48280546-48280564:+] 0.7067 126 6 -13.00 -0.1812 MIMAT0012838 rno-miR-653 312154 Ing3 gucaUCUCUUACA----AAGUUGUg | ||||| | ||||||| uaagAAAGAAUUUUAUAUUCAACAg 2 18 341 365 [rn4:4:48280643-48280667:+] 0.7067 148 7 -8.71 -1.1393 MIMAT0012842 rno-miR-875 312154 Ing3 guggacuauuuugacUCCAUAu |||||| aauuuuauauucaacAGGUAUa 2 8 349 370 [rn4:4:48280651-48280672:+] 0.7067 120 6 -9.52 -0.2672 MIMAT0012843 rno-miR-876 312154 Ing3 accaCUAAGUGUCUCU-UUAGGu |||| ||| ||| ||||| aaagGAUU-ACAUAGACAAUCCu 2 19 109 130 [rn4:4:48280411-48280432:+] 0.7067 132 0 -15.43 -1.1665 MIMAT0012844 rno-miR-665 312154 Ing3 ucccUGGAGUCG-GAGGACCa |::| || ||||||| aauuAUUUAUGCACUCCUGGu 2 17 181 201 [rn4:4:48280483-48280503:+] 0.7067 147 7 -19.61 -0.9647 MIMAT0012852 rno-miR-667 312154 Ing3 gaACCCGACCCACCGUCCACAGu ||| | || :||||||: auUGGAAU-UGUAUUAGGUGUUa 2 22 787 808 [rn4:4:48281089-48281110:+] 0.7428 131 0 -17.21 -0.8374 MIMAT0012853 rno-miR-761 312154 Ing3 acacaGUCAAAGUGGGACGACg ||| | :|::|||||| uucaaCAGGUAUAUUCUGCUGc 2 18 358 379 [rn4:4:48280660-48280681:+] 0.7067 145 6 -22.68 -0.1454 MIMAT0012856 rno-miR-759 312154 Ing3 caguUUUAACAA--ACGUGA-GACg ||||| || |||||| ||| aaguAAAUUAUUUAUGCACUCCUGg 2 19 176 200 [rn4:4:48280478-48280502:+] 0.7067 133 0 -11.95 -0.7758 MIMAT0000552 rno-miR-301a 312154 Ing3 cgaaacUGUUAUGAUAACGUGAc | | ||:| |||||| guaaguAAAUUAUUUAUGCACUc 2 18 174 196 [rn4:4:48280476-48280498:+] 0.7067 125 6 -8.24 -0.1089 MIMAT0000579 rno-miR-148b-3p 312154 Ing3 uguUUCAAGACACUACGUGAcu || || | | ||||||| aguAAAUUAU-UUAUGCACUcc 3 20 177 197 [rn4:4:48280479-48280499:+] 0.7067 137 0 -9.11 -0.1232 MIMAT0004650 rno-miR-340-5p 312154 Ing3 uuagucagagUAACGAAAUAUu || ||||||| gguuuuuaagAUGCCUUUAUAa 2 13 494 515 [rn4:4:48280796-48280817:+] 0.7428 144 7 -8.65 -1.2209 MIMAT0004650 rno-miR-340-5p 312154 Ing3 uuagUCAGAGUAACGAAAUAUu ||| :| :|||||| uuaaAGUGAUACAUUUUUAUAc 2 19 729 750 [rn4:4:48281031-48281052:+] 0.7428 130 6 -3.88 -0.1625 MIMAT0004650 rno-miR-340-5p 312154 Ing3 uuagucagaguaacGAAAUAUu :|||||| auuuuaagaaagaaUUUUAUAu 2 9 337 358 [rn4:4:48280639-48280660:+] 0.7067 124 6 -2.76 -0.1483 MIMAT0000589 rno-miR-342-3p 312154 Ing3 ugcccacgcuAAAGACACACUCu |||:|||| ||| uguguuuauuUUUUUGUGCGAGu 2 14 755 777 [rn4:4:48281057-48281079:+] 0.7428 129 0 -15.37 -0.1475 MIMAT0000596 rno-miR-346 312154 Ing3 ucucCGUCCG-UGAGUCCGUCUGu |::| | || :| |||||| uucuGUGGCCAACAUAUGCAGACa 2 20 238 261 [rn4:4:48280540-48280563:+] 0.7067 126 6 -16.27 -0.2338 MIMAT0000600 rno-miR-129 312154 Ing3 cguucggguCUGGCGUUUUUc |:::||||||| uauauaaauGGUUGCAAAAAa 2 13 414 434 [rn4:4:48280716-48280736:+] 0.6030 148 7 -10.36 -1.3003 MIMAT0000600 rno-miR-129 312154 Ing3 cguucgggucuggcGUUUUUc |||||| guugcaaaaaaaaaCAAAAAa 2 8 424 444 [rn4:4:48280726-48280746:+] 0.6030 120 6 -6.34 -0.3746 MIMAT0000600 rno-miR-129 312154 Ing3 cguucgggucuggcGUUUUUc |||||| aaaaaaacaaaaaaCAAAAAa 2 8 431 451 [rn4:4:48280733-48280753:+] 0.4994 120 6 -2.69 -0.2027 MIMAT0000600 rno-miR-129 312154 Ing3 cguucgggucuggcGUUUUUc |||||| aaacaaaaaacaaaCAAAAAa 2 8 442 462 [rn4:4:48280744-48280764:+] 0.4994 120 6 -5.66 -0.1626 MIMAT0000615 rno-miR-101b 312154 Ing3 aagucGAUAGUGU-CAUGACAu ||: ::|| ||||||| auauuCUGCUGCAUGUACUGUa 2 17 368 389 [rn4:4:48280670-48280691:+] 0.7067 151 7 -20.92 -1.1221 MIMAT0000781 rno-miR-9 312154 Ing3 agUAUGUCGAUCUAUUGGUUUcu ||||| :| || |||||| ugAUACAUUUUUAU-ACCAAAug 3 22 735 756 [rn4:4:48281037-48281058:+] 0.7428 143 0 -11.33 -0.2432 MIMAT0000790 rno-miR-21 312154 Ing3 agUUGUAGUCAGACUAUUCGAu :|:: | | | ||||||| aaGAUGCCUUUAUAAUAAGCUu 2 21 501 522 [rn4:4:48280803-48280824:+] 0.7428 148 7 -7.14 -1.2709 MIMAT0000792 rno-miR-23a 312154 Ing3 ccuuuagggaccgUUACACua |||||| cauuuuuauaccaAAUGUGuu 3 9 740 760 [rn4:4:48281042-48281062:+] 0.7428 120 0 -8.73 -0.2208 MIMAT0000793 rno-miR-23b 312154 Ing3 ccauuagggaccgUUACACua |||||| cauuuuuauaccaAAUGUGuu 3 9 740 760 [rn4:4:48281042-48281062:+] 0.7428 120 0 -8.73 -0.2208 MIMAT0000796 rno-miR-26a 312154 Ing3 ucggauaggaccuaaUGAACUu |||||| ccuauaagaucuugaACUUGAa 2 8 128 149 [rn4:4:48280430-48280451:+] 0.7067 120 6 -13.93 -0.3491 MIMAT0000797 rno-miR-26b 312154 Ing3 uggauaggacuuaaUGAACUu |||||| cuauaagaucuugaACUUGAa 2 8 129 149 [rn4:4:48280431-48280451:+] 0.7067 120 6 -14.94 -0.3491 MIMAT0000801 rno-miR-29b 312154 Ing3 uuGUGACUAAAGUUUACC-ACGau ||||| | :|||||| ||| uaCACUGUAUAUAAAUGGUUGCaa 3 22 407 430 [rn4:4:48280709-48280732:+] 0.6030 121 0 -19.69 -0.4582 MIMAT0000804 rno-miR-30c 312154 Ing3 cgacucucacauccUACAAAUGu :||||||: uuuuuauaccaaauGUGUUUAUu 2 10 742 764 [rn4:4:48281044-48281066:+] 0.7428 125 0 -5.30 -0.1522 MIMAT0000805 rno-miR-30e 312154 Ing3 gaaggucaGUUCCUACAAAUGu ||| :||||||: uuuuauacCAAAUGUGUUUAUu 2 15 743 764 [rn4:4:48281045-48281066:+] 0.7428 134 0 -7.96 -0.1507 MIMAT0000806 rno-miR-30b-5p 312154 Ing3 ucgacucacauccUACAAAUGu :||||||: uuuuauaccaaauGUGUUUAUu 2 10 743 764 [rn4:4:48281045-48281066:+] 0.7428 125 0 -5.30 -0.1522 MIMAT0000807 rno-miR-30d 312154 Ing3 gaaggucagccccUACAAAUGu :||||||: uuuuauaccaaauGUGUUUAUu 2 10 743 764 [rn4:4:48281045-48281066:+] 0.7428 125 0 -8.78 -0.1537 MIMAT0000808 rno-miR-30a 312154 Ing3 gaaggucaGCUCCUACAAAUGu | | :||||||: uuuuauacCAAAUGUGUUUAUu 2 15 743 764 [rn4:4:48281045-48281066:+] 0.7428 126 0 -8.78 -0.1522 MIMAT0000823 rno-miR-101a 312154 Ing3 aagucaAUAGUGU-CAUGACAu |: ::|| ||||||| auauucUGCUGCAUGUACUGUa 2 16 368 389 [rn4:4:48280670-48280691:+] 0.7067 146 7 -15.24 -1.1243 MIMAT0000824 rno-miR-103 312154 Ing3 aguaucgggacauguuACGACGa |||||| uucaacagguauauucUGCUGCa 2 8 358 380 [rn4:4:48280660-48280682:+] 0.7067 120 6 -15.36 -0.2038 MIMAT0000826 rno-miR-107 312154 Ing3 acuaucgggacauguuACGACGa |||||| uucaacagguauauucUGCUGCa 2 8 358 380 [rn4:4:48280660-48280682:+] 0.7067 120 6 -15.36 -0.2038 MIMAT0000827 rno-miR-122 312154 Ing3 guuUGUGGUAACAGUGUGAGGu | |::||| ::|||||| aguAAAUUAUUUAUGCACUCCu 2 20 177 198 [rn4:4:48280479-48280500:+] 0.7067 143 6 -13.29 -0.1037 MIMAT0000828 rno-miR-124 312154 Ing3 ccguaaguggcgcACGGAAu |||||| augguuuuuaagaUGCCUUu 2 8 492 511 [rn4:4:48280794-48280813:+] 0.7428 120 6 -12.32 -0.2393 MIMAT0000834 rno-miR-128 312154 Ing3 uuUCUCUGGC----CAA-GUGACAcu |||| |:| ||| |||||| ccAGAG-CUGUUAUGUUACACUGUau 3 20 392 416 [rn4:4:48280694-48280718:+] 0.7067 127 0 -15.01 -0.2020 MIMAT0000836 rno-miR-130a 312154 Ing3 uacgggaaaauuguaACGUGAc |||||| uaaguaaauuauuuaUGCACUc 2 8 175 196 [rn4:4:48280477-48280498:+] 0.7067 120 6 -7.68 -0.1089 MIMAT0000837 rno-miR-130b 312154 Ing3 uacgggaaAGUAGUAACGUGAc |:||: |||||| uaaguaaaUUAUUUAUGCACUc 2 15 175 196 [rn4:4:48280477-48280498:+] 0.7067 122 6 -8.66 -0.1111 MIMAT0000845 rno-miR-139-5p 312154 Ing3 gaccuCUGUGC-ACGUGACAUcu | :|:| | ||||||| gagcuGUUAUGUUACACUGUAua 3 18 395 417 [rn4:4:48280697-48280719:+] 0.7067 132 0 -15.79 -0.2556 MIMAT0000850 rno-miR-144 312154 Ing3 ucAUGUAGUAGAUAUGACAu |::||: |: ||| ||| guUGUAUU-UUAAUAAUGUa 2 19 158 176 [rn4:4:48280460-48280478:+] 0.7067 120 0 -5.37 -0.1396 MIMAT0000851 rno-miR-145 312154 Ing3 ucCCUAAGGACCCUUUUGACCUg | | |||| |||:|||| gaGUAAUCCU---UAAAUUGGAa 2 22 774 793 [rn4:4:48281076-48281095:+] 0.7428 133 0 -13.37 -0.1449 MIMAT0000854 rno-miR-152 312154 Ing3 ggUUCAAGACAGUACGUGAcu || || | |:||||||| guAAAUUAU-UUAUGCACUcc 3 20 178 197 [rn4:4:48280480-48280499:+] 0.7067 141 0 -9.97 -0.1232 MIMAT0000855 rno-miR-153 312154 Ing3 cuAGUGAAAACAC----UG-AUACGUu |:|:|| |||| || |||||| gaUUAUUUCUGUGGCCAACAUAUGCAg 2 21 232 258 [rn4:4:48280534-48280560:+] 0.7067 127 6 -20.86 -0.7331 MIMAT0000855 rno-miR-153 312154 Ing3 cuagugaaaacacuGAUACGUu :|||||| uguaaguaaauuauUUAUGCAc 2 9 173 194 [rn4:4:48280475-48280496:+] 0.7067 124 6 -7.52 -0.1073 MIMAT0000860 rno-miR-183 312154 Ing3 ucACUUAAGAUGGUCACGGUAu | || | |:| ||||||| ggUAAACCCGAUCCGUGCCAUu 2 21 628 649 [rn4:4:48280930-48280951:+] 0.7428 156 7 -14.56 -0.7666 MIMAT0000863 rno-miR-186 312154 Ing3 ucggguuuuccucuuAAGAAAc |||||| uauaauaagcuuuguUUCUUUg 2 8 511 532 [rn4:4:48280813-48280834:+] 0.7428 120 6 -8.82 -0.1190 MIMAT0000872 rno-miR-199a-5p 312154 Ing3 cuUGUCCAUCAGAC-UUGUGACcc | || |: | || |||||| ccAGAGCUGUUAUGUUACACUGua 3 22 392 415 [rn4:4:48280694-48280717:+] 0.7067 132 0 -13.99 -0.3236 MIMAT0000878 rno-miR-205 312154 Ing3 gucUGAGGCCACCUUACUUCcu |:||| | |||||| agaAUUCCAACG--AUGAAGau 3 20 319 338 [rn4:4:48280621-48280640:+] 0.7067 124 0 -10.76 -0.1149 MIMAT0000883 rno-miR-212 312154 Ing3 accGGCACUGACCUCU-GACAAu |:|| ||| ||| ||||| guaCUGU-ACUCCAGAGCUGUUa 2 20 382 403 [rn4:4:48280684-48280705:+] 0.7067 125 0 -17.41 -1.0525 MIMAT0000885 rno-miR-214 312154 Ing3 gacggaCAGACACGGACGACa || | | :|||||| caacagGUAUAU-UCUGCUGc 2 16 360 379 [rn4:4:48280662-48280681:+] 0.7067 129 6 -14.70 -0.1375 MIMAT0000889 rno-miR-219-5p 312154 Ing3 ucUUAACGCAAACCUGUUAGu :||| | | ||||||| agGAUUAC--AUAGACAAUCc 2 20 111 129 [rn4:4:48280413-48280431:+] 0.7067 144 7 -10.19 -1.2062 MIMAT0000903 rno-miR-320 312154 Ing3 agCGGGAGAGUUGGGUCGAAAa |||:|: :|| : |||||| auGCCUUUAUAA-UAAGCUUUg 2 21 504 524 [rn4:4:48280806-48280826:+] 0.7428 130 6 -17.74 -0.3237 MIMAT0001534 rno-miR-448 312154 Ing3 uacccuguaGGAUGUAUACGUu || ||||||||| uuucuguggCCAACAUAUGCAg 2 14 237 258 [rn4:4:48280539-48280560:+] 0.7067 157 7 -18.24 -0.5270 MIMAT0001534 rno-miR-448 312154 Ing3 uacccUGUAGGAUGUAUACGUu ::| :||: |||||| uguaaGUAAAUUAUUUAUGCAc 2 18 173 194 [rn4:4:48280475-48280496:+] 0.7067 121 6 -6.99 -0.1062 MIMAT0001549 rno-miR-365 312154 Ing3 uauuccuaaaAAUCCCCGUAAu | | ||||||| uuucucaaagUAAUGGGCAUUc 2 13 280 301 [rn4:4:48280582-48280603:+] 0.7067 144 7 -9.47 -1.2760 MIMAT0003114 rno-miR-383 312154 Ing3 ucGGU-GUCAG-UG---GAAGAC-UAGa ||| :|||| || :||||| ||| ugCCAUUAGUCUACAUGUUUCUGCAUCc 2 21 643 670 [rn4:4:48280945-48280972:+] 0.7428 121 0 -20.37 -1.0844 MIMAT0003122 rno-miR-370 312154 Ing3 uugguccaaGGUGGGGUCGUCCg :|| ::||||||| uugugaaacUCA-UUCAGCAGGc 2 15 530 551 [rn4:4:48280832-48280853:+] 0.7428 144 7 -19.83 -1.0310 MIMAT0003176 rno-miR-539 312154 Ing3 ugugugguuccuauuAAAGAGg |||||| guacuccucaaccauUUUCUCa 2 8 265 286 [rn4:4:48280567-48280588:+] 0.7067 120 6 -11.50 -0.2007 MIMAT0003193 rno-miR-494 312154 Ing3 uccaAAGGGCACAUACAAAGu || : | ||||||| gccaUUAGUCUACAUGUUUCu 2 18 644 664 [rn4:4:48280946-48280966:+] 0.7428 141 7 -8.76 -0.6467 MIMAT0003193 rno-miR-494 312154 Ing3 uccaaagggcacauACAAAGu |||||| uuuauaauaagcuuUGUUUCu 2 8 509 529 [rn4:4:48280811-48280831:+] 0.7428 120 6 -4.37 -0.1343 MIMAT0003196 rno-miR-376b-3p 312154 Ing3 uucaccuacaaggaGAUACUa |||||| gcacuccuggugugCUAUGAa 2 8 191 211 [rn4:4:48280493-48280513:+] 0.7067 120 6 -11.97 -0.2216 MIMAT0003199 rno-miR-381 312154 Ing3 cucucgaacgggAACAUAu |||||| gaauuuuaugagUUGUAUu 2 8 147 165 [rn4:4:48280449-48280467:+] 0.7067 120 6 -4.85 -0.4083 MIMAT0003201 rno-miR-382 312154 Ing3 gcuuaggUGGUGC-UUGUUGAag || | | ||||||| cacgaggACGAAGAAACAACUca 3 16 69 91 [rn4:4:48280371-48280393:+] 0.7067 130 0 -17.78 -0.1226 MIMAT0005304 rno-miR-301b 312154 Ing3 cgaaacUGUUAUGGUAACGUGAc | | ||:: |||||| guaaguAAAUUAUUUAUGCACUc 2 18 174 196 [rn4:4:48280476-48280498:+] 0.7067 121 6 -8.34 -0.1089 MIMAT0005309 rno-miR-384-5p 312154 Ing3 uguaacggauccUUA-ACAAAUGu ||| ||||||: auuuuuauaccaAAUGUGUUUAUu 2 12 741 764 [rn4:4:48281043-48281066:+] 0.7428 130 0 -6.68 -0.1507 MIMAT0005311 rno-miR-410 312154 Ing3 uguccgguAGACACAAUAUAa | || |||:||| uugaauuuUAUGAGUUGUAUu 2 14 145 165 [rn4:4:48280447-48280467:+] 0.7067 133 0 -8.08 -0.1175 MIMAT0005311 rno-miR-410 312154 Ing3 uguccgguagacacAAUAUAa |||||| uuuaagaaagaauuUUAUAUu 2 8 339 359 [rn4:4:48280641-48280661:+] 0.7067 120 6 -4.65 -0.1430 MIMAT0005320 rno-miR-495 312154 Ing3 uucuucacgugguacAAACAAa |||||| gccuuuauaauaagcUUUGUUu 2 8 506 527 [rn4:4:48280808-48280829:+] 0.7428 120 6 -4.10 -0.1274

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G057751 Ing3 Rattus norvegicus 312154

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ing3 RAID00024007 rno-miR-205 miRNA MIMAT0000878 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00051154 rno-miR-130a-3p miRNA MIMAT0000836 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00056485 rno-miR-383-5p miRNA MIMAT0003114 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00071146 rno-miR-101b-3p miRNA MIMAT0000615 Ing3 mRNA 312154 Prediction 0.2381 Ing3 RAID00082731 rno-miR-381-3p miRNA MIMAT0003199 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00203136 rno-miR-128-3p miRNA MIMAT0000834 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00212198 rno-miR-301a-3p miRNA MIMAT0000552 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00261196 rno-miR-384-5p miRNA MIMAT0005309 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00263960 rno-miR-370-3p miRNA MIMAT0003122 Ing3 mRNA 312154 Prediction 0.2202 Ing3 RAID00280139 rno-miR-153-3p miRNA MIMAT0000855 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00289295 rno-miR-21-5p miRNA MIMAT0000790 Ing3 mRNA 312154 Prediction 0.2202 Ing3 RAID00291236 rno-miR-30e-5p miRNA MIMAT0000805 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00298988 rno-miR-320-3p miRNA MIMAT0000903 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00375278 rno-miR-130b-3p miRNA MIMAT0000837 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00431867 rno-miR-30d-5p miRNA MIMAT0000807 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00533048 rno-miR-340-5p miRNA MIMAT0004650 Ing3 mRNA 312154 Prediction 0.2381 Ing3 RAID00558060 rno-miR-463-5p miRNA MIMAT0017309 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00633138 rno-miR-126a-5p miRNA MIMAT0000831 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00719350 rno-miR-124-3p miRNA MIMAT0000828 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00826902 rno-miR-93-3p miRNA MIMAT0017109 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00917359 rno-miR-139-5p miRNA MIMAT0000845 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00969432 rno-miR-376b-3p miRNA MIMAT0003196 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID00991418 rno-miR-1249 miRNA MIMAT0017892 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01129481 rno-miR-877 miRNA MIMAT0005285 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01132912 rno-miR-30c-5p miRNA MIMAT0000804 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01245047 rno-miR-30b-5p miRNA MIMAT0000806 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01286151 rno-miR-219a-5p miRNA MIMAT0000889 Ing3 mRNA 312154 Prediction 0.2202 Ing3 RAID01309251 rno-miR-674-3p miRNA MIMAT0005330 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01384770 rno-miR-30a-5p miRNA MIMAT0000808 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01384917 rno-miR-466b-2-3p miRNA MIMAT0017286 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01388678 rno-miR-350 miRNA MIMAT0000604 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01424016 rno-miR-365-3p miRNA MIMAT0001549 Ing3 mRNA 312154 Prediction 0.2202 Ing3 RAID01677874 rno-miR-301b-3p miRNA MIMAT0005304 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01735011 rno-miR-183-5p miRNA MIMAT0000860 Ing3 mRNA 312154 Prediction 0.2202 Ing3 RAID01832558 rno-miR-107-3p miRNA MIMAT0000826 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01886881 rno-miR-145-5p miRNA MIMAT0000851 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01924439 rno-miR-6316 miRNA MIMAT0025053 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID01954524 rno-let-7f-2-3p miRNA MIMAT0017090 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02058614 rno-miR-342-3p miRNA MIMAT0000589 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02106736 rno-miR-9a-5p miRNA MIMAT0000781 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02126746 rno-miR-3590-5p miRNA MIMAT0017889 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02163565 rno-miR-382-5p miRNA MIMAT0003201 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02195987 rno-miR-129-5p miRNA MIMAT0000600 Ing3 mRNA 312154 Prediction 0.2202 Ing3 RAID02197268 rno-miR-3576 miRNA MIMAT0017862 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02273906 rno-miR-539-5p miRNA MIMAT0003176 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02428656 rno-miR-29b-3p miRNA MIMAT0000801 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02496178 rno-miR-501-5p miRNA MIMAT0003116 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02575198 rno-miR-23a-3p miRNA MIMAT0000792 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02589244 rno-miR-582-3p miRNA MIMAT0017360 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02654953 rno-miR-346 miRNA MIMAT0000596 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02730762 rno-miR-148b-3p miRNA MIMAT0000579 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02736381 rno-miR-186-5p miRNA MIMAT0000863 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02814483 rno-miR-410-3p miRNA MIMAT0005311 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02878577 rno-miR-3583-3p miRNA MIMAT0017874 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID02930679 rno-miR-23b-3p miRNA MIMAT0000793 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID03179084 rno-miR-212-3p miRNA MIMAT0000883 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID03236332 rno-miR-665 miRNA MIMAT0012844 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID03258875 rno-miR-101a-3p miRNA MIMAT0000823 Ing3 mRNA 312154 Prediction 0.2381 Ing3 RAID03322218 rno-miR-495 miRNA MIMAT0005320 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID03337139 rno-miR-26a-5p miRNA MIMAT0000796 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID03509222 rno-miR-103-3p miRNA MIMAT0000824 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID03523224 rno-miR-144-3p miRNA MIMAT0000850 Ing3 mRNA 312154 Prediction 0.2202 Ing3 RAID03553733 rno-miR-494-3p miRNA MIMAT0003193 Ing3 mRNA 312154 Prediction 0.2202 Ing3 RAID03577228 rno-miR-448-3p miRNA MIMAT0001534 Ing3 mRNA 312154 Prediction 0.2202 Ing3 RAID03656819 rno-miR-122-5p miRNA MIMAT0000827 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID03695849 rno-miR-26b-5p miRNA MIMAT0000797 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID03750487 rno-miR-199a-5p miRNA MIMAT0000872 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID03897859 rno-miR-214-3p miRNA MIMAT0000885 Ing3 mRNA 312154 Prediction 0.1828 Ing3 RAID04002958 rno-miR-152-3p miRNA MIMAT0000854 Ing3 mRNA 312154 Prediction 0.1828