DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Klhl23; Klhl23_predicted; rCG_27023 rno-let-7d 192 210 UGAUACGUUGGAUGAUGGAGA- || |||| ||:|||:| ---CUGGAACCC-CUGCCUUUU Klhl23; Klhl23_predicted; rCG_27023 rno-let-7e 192 209 UGAUAUGUUGGAGGAUGGAGU |: |||| |||:|||: ---CUGGAACC-CCUGCCUUU Klhl23; Klhl23_predicted; rCG_27023 rno-miR-10a 341 362 GUGUUUAAGCCUAGAUGUCCCAU :|:|: |: :| |||:||| UGCGAGCUUA-GUGUACGGGGA- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-124a 35 60 AC-CGUAAGU-GGCGCACGGAAUU- | ||| : | |||||||:| AGUGCAGAGUUUGGGGUGCCUUGAU Klhl23; Klhl23_predicted; rCG_27023 rno-miR-133a 344 364 UGUCGACCAACUU-CCCCUGGUU |||| || |||||| -GAGCUUAGUGUACGGGGACG-- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-136 203 227 AGGUAGUAGUUUUGUUU-ACCUCA- || |: ||::||:| |||||| GCCUUUUA-AAGGCAGAGUGGAGUA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-140 281 311 GAUGGUAU---CCCAU------UUUGGUGA- |:|| ||||| ||||||:| -CAUCAACACUGGGUAUAGUCAAAACCAUUC Klhl23; Klhl23_predicted; rCG_27023 rno-miR-141 104 124 -GGUAGAAAUGGUCUG--UCACAAU ||||| |||||| |||| ACCAUCC---CCAGACCCAGUGA-- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-143 167 193 -ACUCGAUGUCA--CGAA-GUAGAGU ||||:|| :| |:| |:|||| UUGAGUUAGGGAGAGUUCACGUCUCC Klhl23; Klhl23_predicted; rCG_27023 rno-miR-148b 37 60 -UGUUUCAAGACACUACGUGACU- :||:||||: |:||| :||| UGCAGAGUUUGG-GGUGCCUUGAU Klhl23; Klhl23_predicted; rCG_27023 rno-miR-150 153 182 GUGACCAUGUUCCCAA------CCCUCU- :| |||:|| |||| |||||| UGCAUGUAUAACGGUUGAGUUAGGGAGAG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-18 251 286 AUAGACGU---------------GAUCUACGUGGAAU ||||||| ||:| |||:| CAUCUGCAGUGAAUCCUUUCUUCCUGGUAGCAUCA-- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-199a 273 295 CUUGUCCAUCAGACUUGUGACCC- | ||||| ||||||||| --CCUGGUAGCAUCAACACUGGGU Klhl23; Klhl23_predicted; rCG_27023 rno-miR-200a 105 124 UGUAGCAAUGGUCUG--UCACAAU |||| |||||| |||| CCAUCC---CCAGACCCAGUGA-- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-204 211 250 -UCCGUAU--CCU------------ACUGUUUCC-CUU- ||||| ||| |||:||||| ||| AAGGCAGAGUGGAGUAUUUGACACUUGAUAAAGGUGAAA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-20b* 241 262 GUCUUCACGAGUGU-GACGUCA- |:||| :|| ||||||| --AAGGUGAAAGCAUCUGCAGUG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-211 211 250 -UCCGUUUC-CU-------------ACUGUUUCC-CUU- |||||:|| |: |||:||||| ||| AAGGCAGAGUGGAGUAUUUGACACUUGAUAAAGGUGAAA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-22 255 283 -UGUCA--------AGAAGUUGACCGUCGAA :|||| ||||| ||||:||| UGCAGUGAAUCCUUUCUUC--CUGGUAGCA- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-224 7 27 AUUUGCCUU-GGUGAUCACUGAAC || :|||||| |:||| ----AGGUCGUCACUAGGGGCUUA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-25 339 360 AGUCUGGCUCUGUUCACGUUAC- | |||| ||||:| | --CGUGCGAGCUUAGUGUACGGG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-290 30 51 -UUUUUCACGGGGGUAUCAAACUC- |||:||||| ||||||:| AAAAGAGUGCAG----AGUUUGGGG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-291-5p 356 387 -UCUCUC-------CCGGAGGUGAAACUAC- :|:|| |||:|: :||||| || CGGGGACGUGGAAUGGCUUUAGCUUUGUUGG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-292-5p 29 51 GUUUUCUCGGGGGUCAAACUCA |||||||: | ||||||:| AAAAAGAGUGCAGAGUUUGGGG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-296 37 58 -UGUCCUAACUCCCCCCCGGGA- :||| :|| |||| |||:| UGCAGAGUUU--GGGGUGCCUUG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-297 49 73 GUACGUA--UGUACGUGUGUAUGUA :||| |:||| :|||||:| GGUGCCUUGAUAUGGGCACAUGCU- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-298 174 207 -CCUUCUU--GUCGGGAGGA-------GACGG- ||:|||: || :||||| ||||| AGGGAGAGUUCACGUCUCCUGGAACCCCUGCCU Klhl23; Klhl23_predicted; rCG_27023 rno-miR-32 18 43 -CGUUGAAUCAUUA----CACGUUAU | ::|||||||| |||||: AGGGGCUUAGUAAAAAGAGUGCAGA- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-324-5p 3 41 UGUGGUUA-CGG-GAUCCCC-------------UACGC ||| ::| |:| ||||||| :||| CCACAGGUCGUCACUAGGGGCUUAGUAAAAAGAGUGCA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-329 28 54 -UUUUUC-CAA---UCGA-CCCACACAA |||||| || ||:| ||| ||| UAAAAAGAGUGCAGAGUUUGGG-GUGC- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-330 43 79 AGAGACGUC-CGGGAC-----------ACGAAA-CG- |:|| :| |||:|| |||| || -GUUUGGGGUGCCUUGAUAUGGGCACAUGCUAAGGCA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-337 6 26 UUUCC-GUAGUAUAUCCUCGACUU ||| |:||| ||||:||| -CAGGUCGUCAC-UAGGGGCUU-- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-339 343 369 ACUCGAGGAC----CUCCUGUCCCU- |||||: |:||||: ||| CGAGCUUAGUGUACGGGGACGUGGAA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-340 345 368 CCGAUAUUUCAU-UGACUCUGC-CU- ||| |||: || |:|||| |: AGCUU---AGUGUACGGGGACGUGGA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-34a 59 88 -UUGUUG-GU-CGAUUCUGUGACG--GU- | ::| || ||||||:||:|| || UAUGGGCACAUGCUAAGGCAUUGGAACAA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-351 5 52 -GUCCG--AGU--UUCCCGAGGA-----------GU---- CCCU ||||: ||| |:|||||: || |||: ACAGGUCGUCACUAGGGGCUUAGUAAAAAGAGUGCAGAGUUUGGGGU Klhl23; Klhl23_predicted; rCG_27023 rno-miR-483 4 40 -UGUUCUGCCC---UCCCCUC---------CUCACU |||:| || ||||| ||||| CACAGGUCGUCACUAGGGGCUUAGUAAAAAGAGUGC Klhl23; Klhl23_predicted; rCG_27023 rno-miR-485 178 210 -CUUAAGU----AGUGCC----GGUCGGAGA- ||:|||| || :|| || ||||:| AGAGUUCACGUCUCCUGGAACCCCUGCCUUUU Klhl23; Klhl23_predicted; rCG_27023 rno-miR-541 243 271 ACACUGGUUGUAGU-----CUUAGGGAA- |||| |:|||| ||||||:|| GGUGAA-AGCAUCUGCAGUGAAUCCUUUC Klhl23; Klhl23_predicted; rCG_27023 rno-miR-96 25 56 -UCGUUUUUA-CACGA--------UCACGGUUU ||:||||| |||| :||||| UAGUAAAAAGAGUGCAGAGUUUGGGGUGCCU-- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-99a 3 24 -GUGUUCUAGCCUAGAUGCCCAA ||| ||:||| ||| ||| CCAC-AGGUCGUCACUAGGGGC- Klhl23; Klhl23_predicted; rCG_27023 rno-miR-99b 341 361 GCGUUCCAGCCAAGAUGCCCAC ||:|| |: || |||||| UGCGAGCUUAGUG-UACGGGG- Klhl23; Klhl23_predicted; rCG_27023 rno-let-7d 189 208 ugauACGUUGGAUGAUGGAGA || |||| ||:|||:| ctccTGGAACC-CCTGCCTTT Klhl23; Klhl23_predicted; rCG_27023 rno-let-7e 189 208 ugauAUGUUGGAGGAUGGAgu |: |||| |||:||| ctccTGGAACC-CCTGCCTtt Klhl23; Klhl23_predicted; rCG_27023 rno-miR-10a 331 362 GUGUUUAAGC---CUAG------AUGUCCCau |:| || ||| || | |||:||| CGCTAAGTCGTGCGAGCTTAGTGTACGGGGac Klhl23; Klhl23_predicted; rCG_27023 rno-miR-124a 36 58 acCGU---AAGUGGCGCACGGAAUU ||| ||:: | |||||||:| gtGCAGAGTTTG--GGGTGCCTTGA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-133a 343 365 ugUCG-ACCAACUUCCCCUGguu ||| | || | |||||| cgAGCTTAGTGTACGGGGACgtg Klhl23; Klhl23_predicted; rCG_27023 rno-miR-133b 344 365 aUCG-ACCAACUUCCCCUGguu ||| | || | |||||| gAGCTTAGTGTACGGGGACgtg Klhl23; Klhl23_predicted; rCG_27023 rno-miR-136 202 225 AGGUAGUAGUUUUGU-UUACCUCA | | |: | ||::|| |:|||||| TGCCTTTTAAAGGCAGAGTGGAGT Klhl23; Klhl23_predicted; rCG_27023 rno-miR-140 284 309 GAUGGUAUCC----CA-UUUUGGUGA | || |:|| || |||||||:| CAACACTGGGTATAGTCAAAACCATT Klhl23; Klhl23_predicted; rCG_27023 rno-miR-141 105 125 GGUAGAAAUGGUCU--GUCACaau ||||| ||||| ||||| CCATC---CCCAGACCCAGTGact Klhl23; Klhl23_predicted; rCG_27023 rno-miR-143 168 192 ACUCGAUGUCAC-GAAGU--AGAGu ||||:|| :| | |||| |||| TGAGTTAGGGAGAGTTCACGTCTCc Klhl23; Klhl23_predicted; rCG_27023 rno-miR-148b 38 58 uGUUUCAAGACACUACGUGACU ||:|||| || |:||| :||| gCAGAGTT-TGGGGTGCCTTGA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-18 225 257 AUAGAC-GUGAUCUA----------CGUGGAau |||:|| |||| ||| |||:|| TATTTGACACTTGATAAAGGTGAAAGCATCTgc Klhl23; Klhl23_predicted; rCG_27023 rno-miR-199a 271 293 cuuGUCCAUCAGACUUGUGACCC | ||||| | ||||||||| ttcCTGGTAGCATCAACACTGGG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-200a 102 125 uGUAGCAAUGGUCU--GUCACaau || | | ||||| ||||| gCACCATCCCCAGACCCAGTGact Klhl23; Klhl23_predicted; rCG_27023 rno-miR-204 222 248 ucCGUAUCCU----ACUGUUUCC-CUU |:|| || |||:||||| ||| gaGTATTTGACACTTGATAAAGGTGAA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-20b* 239 260 gUCUUCACGAGUGU-GACGUCA | |:||| :|| ||||||| tAAAGGTGAAAGCATCTGCAGT Klhl23; Klhl23_predicted; rCG_27023 rno-miR-211 212 248 UCCGUUUC----------CU----ACUGUUUCC-CUU |||||:|| || |||:||||| ||| AGGCAGAGTGGAGTATTTGACACTTGATAAAGGTGAA Klhl23; Klhl23_predicted; rCG_27023 rno-miR-22 264 283 ugucAAGAAGUUGACCGUCGaa |||||| ||||:||| tcctTTCTTC--CTGGTAGCat Klhl23; Klhl23_predicted; rCG_27023 rno-miR-224 2 26 auuUGCCUUG--GUGAUCACUGAAc || |: | |||||| |:||| tccACAGGTCGTCACTAGGGGCTTa Klhl23; Klhl23_predicted; rCG_27023 rno-miR-25 348 370 AGUC---UGGCUCUGUUCACGUUAC |:|| || |:||| ||| |||| TTAGTGTACGGGGAC--GTGGAATG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-290 31 49 UUUUUCACGGGGGUAUCAAACUC |||:|||| || ||||||:| AAAGAGTG----CAGAGTTTGGG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-291-5p 364 385 uCUCUCCCGGAGGUGAAACUAC |: | |||:|: :||||| || tGGAATGGCTTTAGCTTTGTTG Klhl23; Klhl23_predicted; rCG_27023 rno-miR-296 38 56 uGUCCUAACUCCCCCCCGGGA ||| :|| |||| |||:| gCAGAGTT--TGGGGTGCCTT Klhl23; Klhl23_predicted; rCG_27023 rno-miR-297 49 73 guACGUA--UGUACGUGUGUAUGua ||| | |:||| :|||||:| ggTGCCTTGATATGGGCACATGCta Klhl23; Klhl23_predicted; rCG_27023 rno-miR-298 175 205 CCUUCU----UGUCG-GGA----GGAGACGG ||:||| ||: | ||| || ||||| GGGAGAGTTCACGTCTCCTGGAACCCCTGCC Klhl23; Klhl23_predicted; rCG_27023 rno-miR-32 19 43 CGUUGAAUCAUU----ACACGUuau | ::|||||||| ||||| GGGGCTTAGTAAAAAGAGTGCAgag Klhl23; Klhl23_predicted; rCG_27023 rno-miR-324-5p 30 54 uguggUUACGGGAUC---CCCUACGc |:|| | || |||:||| aaaagAGTG-CAGAGTTTGGGGTGCc Klhl23; Klhl23_predicted; rCG_27023 rno-miR-329 29 54 UUUUUC-CA---AUCGACCCACACaa |||||| || ||:| || ||| AAAAAGAGTGCAGAGTTTGGGGTGcc Klhl23; Klhl23_predicted; rCG_27023 rno-miR-330 33 58 agagACGUCCGGGA---CACGAAACg ||||| ::| |||| ||| agagTGCAGAGTTTGGGGTGCCTTGa Klhl23; Klhl23_predicted; rCG_27023 rno-miR-337 5 27 UUUCC-GUAGUAUAUCCUCGACUu | ||| |:||| ||||:||| | ACAGGTCGTCA-CTAGGGGCTTAg Klhl23; Klhl23_predicted; rCG_27023 rno-miR-34a 83 105 UUGUUGGUCGAUUCUGUGACGgu ||||||:| :| :| |||| AACAACTAATTCTAGCCCTGCac Klhl23; Klhl23_predicted; rCG_27023 rno-miR-351 1 23 gucCGAGUUUCCCG-AG-GAGUCCCu |: || ||| | || || :||| ---GTCCACAGGTCGTCACTAGGGGc Klhl23; Klhl23_predicted; rCG_27023 rno-miR-483 5 39 UGUUCUGC---CCUCCCC---------UCCUCACu |||:| || ||||| | ||||| ACAGGTCGTCACTAGGGGCTTAGTAAAAAGAGTGc Klhl23; Klhl23_predicted; rCG_27023 rno-miR-485 179 208 CUUAAGU----AGUGCC----GGUCGGAGA ||:|||| || :|| || ||||:| GAGTTCACGTCTCCTGGAACCCCTGCCTTT Klhl23; Klhl23_predicted; rCG_27023 rno-miR-96 26 57 UCGUUUUU-ACACG------A--UCACGGuuu ||:||||| |||| | :||||| AGTAAAAAGAGTGCAGAGTTTGGGGTGCCttg Klhl23; Klhl23_predicted; rCG_27023 rno-miR-99a 4 24 GUGUUCUAGCCUAGAUGCCCaa ||| ||:||| ||| ||| CAC-AGGTCGTCACTAGGGGct Klhl23; Klhl23_predicted; rCG_27023 rno-miR-99b 341 361 gCGUUCCAGCCAAGAUGCCCac ||:|| |: | | |||||| tGCGAGCTTAG-TGTACGGGga Klhl23; Klhl23_predicted; rCG_27023 rno-miR-199a 286 293 CUUGU--------------------CCAUCAGACUUGUGACCC ||||| | ||||||||| CAUCUGCAGUGAAUCCUUUCUUCCUGGUAGCAUCAACACUGGGU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Klhl23 RAID00114364 rno-miR-361-3p miRNA MIMAT0017199 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID00406145 rno-miR-324-5p miRNA MIMAT0000553 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID00826339 rno-miR-149-5p miRNA MIMAT0035726 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID01087455 rno-miR-466d miRNA MIMAT0017824 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID01361732 rno-miR-208a-5p miRNA MIMAT0017155 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID01502449 rno-miR-466b-5p miRNA MIMAT0005278 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID01981753 rno-miR-3562 miRNA MIMAT0017832 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID02001457 rno-miR-3595 miRNA MIMAT0017903 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID02169396 rno-miR-672-3p miRNA MIMAT0017312 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID02277990 rno-miR-325-3p miRNA MIMAT0004639 Klhl23 mRNA 311114 Prediction 0.2202 Klhl23 RAID02348227 rno-miR-139-5p miRNA MIMAT0000845 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID02589849 rno-miR-1-5p miRNA MIMAT0003162 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID02787761 rno-miR-126b miRNA MIMAT0017843 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID02906349 rno-miR-206-5p miRNA MIMAT0017154 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID03764841 rno-miR-183-5p miRNA MIMAT0000860 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID03947927 rno-miR-320-3p miRNA MIMAT0000903 Klhl23 mRNA 311114 Prediction 0.1828 Klhl23 RAID04007904 rno-miR-208b-5p miRNA MIMAT0017844 Klhl23 mRNA 311114 Prediction 0.1828