DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000603 rno-miR-20a* 315936 Zbtb38 acauucACGAGCAUUACGUca | | | |||||| ucacucUACACAGAAUGCAua 3 16 176 196 [rn4:8:101782725-101782745:-] 0.6196 123 0 -6.27 -0.1464 MIMAT0000604 rno-miR-350 315936 Zbtb38 cacuuucacauacccgAAACACUu ||||||| aaggucuucaaaauugUUUGUGAu 2 9 12 35 [rn4:8:101782886-101782909:-] 0.4027 140 7 -6.70 -0.9654 MIMAT0000607 rno-miR-7a* 315936 Zbtb38 uaccGUCUGACACUAAACAAca :| :|| | |||||| uuuuUAAGCUUAGUUUUGUUca 3 19 62 83 [rn4:8:101782838-101782859:-] 0.6196 130 0 -3.42 -0.2152 MIMAT0004743 rno-miR-300-5p 315936 Zbtb38 uguuuccuauuggagAGAAGUu |||||| caacaguuagaaaggUCUUCAa 2 8 1 22 [rn4:8:101782899-101782920:-] 0.5677 120 6 -12.03 -0.1235 MIMAT0003116 rno-miR-501 315936 Zbtb38 aaagugggucccuGUUUCCUAa |||||||| cacauaauauucuCAAAGGAUg 2 10 82 103 [rn4:8:101782818-101782839:-] 0.6196 145 7 -12.70 -0.5874 MIMAT0003116 rno-miR-501 315936 Zbtb38 aaAGUGGGUCCCUGUUUCCUAa || ||| | ||||||| acUCCCCC---CAAAAAGGAUc 2 21 131 149 [rn4:8:101782772-101782790:-] 0.6196 144 7 -13.32 -0.8498 MIMAT0005281 rno-miR-871 315936 Zbtb38 acacuggccgugguuaGACUUAu |||||| cauaaaaacaaacuagCUGAAUc 2 8 193 215 [rn4:8:101782706-101782728:-] 0.6196 120 6 -10.21 -0.2129 MIMAT0005285 rno-miR-877 315936 Zbtb38 gggacgCGGUAGAGGAGAUg ||:: ||||||| aaacuaGCUGAAUCCUCUAa 2 15 202 221 [rn4:8:101782700-101782719:-] 0.6196 146 7 -14.49 -1.3089 MIMAT0012824 rno-miR-513 315936 Zbtb38 uacuuucUGUGGAAGAACACUu | | :| :|||||| ggucuucAAAAUUGUUUGUGAu 2 16 14 35 [rn4:8:101782886-101782907:-] 0.4027 131 6 -8.81 -0.1306 MIMAT0012856 rno-miR-759 315936 Zbtb38 caguuuuaacaaACGUGAGAcg | |||||| uggguuuuaucaUUCACUCUac 3 11 163 184 [rn4:8:101782737-101782758:-] 0.6196 122 0 -8.48 -0.1485 MIMAT0000606 rno-miR-7a 315936 Zbtb38 ugUUGUUUUAGUGAUCAGAAGgu ||||: | :|||||| -cAACAGUUAGAAAGGUCUUCaa 3 22 1 22 [rn4:8:101782899-101782920:-] 0.5677 129 0 -14.56 -0.1148 MIMAT0000780 rno-miR-7b 315936 Zbtb38 ugUUGUUUUAGUGUUCAGAAGgu ||||: | |:|||||| -cAACAGUUAGAAAGGUCUUCaa 3 22 1 22 [rn4:8:101782899-101782920:-] 0.5677 137 0 -17.37 -0.1148 MIMAT0000790 rno-miR-21 315936 Zbtb38 aguuguagucagacuAUUCGAu |||||| uuuuuuaaguuuuuuUAAGCUu 2 8 51 72 [rn4:8:101782849-101782870:-] 0.6196 120 6 -9.88 -0.1649 MIMAT0000812 rno-miR-33 315936 Zbtb38 acguuacguugaugUUACGUg |||||| uucacucuacacagAAUGCAu 2 8 175 195 [rn4:8:101782726-101782746:-] 0.6196 120 6 -10.50 -0.1866 MIMAT0005320 rno-miR-495 315936 Zbtb38 uucuucACGUGGU-ACAAACAaa | || | ||||||| aaggucUUCAAAAUUGUUUGUga 3 17 12 34 [rn4:8:101782887-101782909:-] 0.5677 127 0 -9.19 -0.4946 MIMAT0005320 rno-miR-495 315936 Zbtb38 uucuucacgugguacAAACAAa |||||| uuuuuuaagcuuaguUUUGUUc 2 8 61 82 [rn4:8:101782839-101782860:-] 0.6196 120 6 -4.39 -0.1193

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G094025 Zbtb38 Rattus norvegicus 315936

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Zbtb38 rno-let-7a 649 675 UUGAUAUGUUG----GAUGAUGG-AGU- |||:||| ||:||:|| ||| --AUAUGCAAAACAGCUGCUGCCCUCAG Zbtb38 rno-let-7c 649 675 UUGGUAUGUUG----GAUGAUGG-AGU- :||:||| ||:||:|| ||| --AUAUGCAAAACAGCUGCUGCCCUCAG Zbtb38 rno-let-7d 649 674 UGAUACGUUG----GAUGAUGG-AGA ||||||| ||:||:|| || -AUAUGCAAAACAGCUGCUGCCCUCA Zbtb38 rno-let-7f 649 675 UUGAUAUGUUA----GAUGAUGG-AGU- |||:||| ||:||:|| ||| --AUAUGCAAAACAGCUGCUGCCCUCAG Zbtb38 rno-let-7i 652 675 -UGUCGUGUUUGAUGAUGG-AGU- :|| || |:||:||:|| ||| UGCAAAAC-AGCUGCUGCCCUCAG Zbtb38 rno-miR-101a 445 468 GAAGUCAA-UAGU--GUCAUGACAU- |||| ||| |||||:|||| ---GAGUUCAUCUGUCAGUAUUGUAA Zbtb38 rno-miR-101b 447 468 GAAGUCGAUAGUGUCAUGACAU- |||| ||:|| ||||:|||| GUUCAUCUGUC--AGUAUUGUAA Zbtb38 rno-miR-122a 723 753 -UGUUUG-UGGUAACAGUG----UGAGGU- |||:|: ||| ||| ||| |||||: AACAGAUGACCUUUGCCACGAAAACUCCGA Zbtb38 rno-miR-125b 83 110 -AGUGU-UCAAU-CCCAGA---GUCCCU ||:|: || ||||| |||| AUCGCGCAGAGAUGGGUCGGCGCAGGU- Zbtb38 rno-miR-127 224 247 -UCGGUUCGAGUCUGCCUA-GGCU- ||| ||| :|:|||: |||| AAGC--AGCAGGGGCGGGAGCCGAA Zbtb38 rno-miR-130b 753 780 UACGGGAAAG---UAGU---AACGUGAC- |:||| :||| |||||||| --UCUCUUGGAGAGUCAACCUUGCACUGA Zbtb38 rno-miR-133a 225 247 -UGUCGACCAACUUCCCCUGGUU- :|||| || | ||| :||:| AGCAGCAGG--GGCGGGAGCCGAA Zbtb38 rno-miR-133b 227 247 AUCGACCAACUUCCCCUGGUU- ||| || | ||| :||:| CAGCAGG--GGCGGGAGCCGAA Zbtb38 rno-miR-137 284 309 -GAUGCGCAUAAGAA----UUCGUUAU ||:|| ||| |||||:| UCUGCGAGC--UCUGUGCGAAGCAGUU Zbtb38 rno-miR-138 247 264 CUAAGUGUU----GUGGUCGA :||| ||||||| ----GGCAAGCCCCACCAGCA Zbtb38 rno-miR-144 445 468 GAUCAUGUAG-UAGAUAUGACAU- ||| |||| :|| :||:|||| -GAGUUCAUCUGUCAGUAUUGUAA Zbtb38 rno-miR-145 588 621 -UUC-CCUA-----AGGACCCUU---UUGACCUG :|| ||| ||| ||||: :|| ||| CGAGCGGAGGCAUGUCC-GGGAGCAUGACGGGAA Zbtb38 rno-miR-151* 369 395 -AUGAUCU-GACACUCGA---GGAGCU |:| ||| |||||:|| |:|| GUGCAAGACCUGUGGGCGGCGCUUCU- Zbtb38 rno-miR-152 747 781 -GGGUUCAAGA------CAGU----ACGUGACU- :||:| ||| |||| |||||||| CUCCGAUCUCUUGGAGAGUCAACCUUGCACUGAU Zbtb38 rno-miR-17 663 697 -UGAUGG-------ACGUGACA---UUCGUGAAAC :||:|| ||||| |||||||| UGCUGCCCUCAGAAUGCACCAAAAGAAGCACUUA- Zbtb38 rno-miR-18 664 684 AUAGACGUGA-UCU-ACGUGGAAU |||| || ||| |||||| --GCUGCCCUCAGAAUGCACCA-- Zbtb38 rno-miR-183 356 374 GUCACUUAA-GAUGGUCACGGUAU ||| |||||||||| ---AGAAGCCCUACCAGUGCA--- Zbtb38 rno-miR-185 545 576 CUUGACGGAA--------------AGAGAGGU- ||||:|| |||||||| --UCUGCUUUCAGGGUUUCUUAUAUCUCUCCAC Zbtb38 rno-miR-187 470 495 GCCGA-----CGUUGUGUUCUGUGCU |||| || ||:|||||| AGGCUUUCACGCUGAACGAGACACU- Zbtb38 rno-miR-194 511 536 -AGGUGUA---CCUCAACGACAAUGU |||||| |||| || ||||| AUCCACACAGGGGAGAAGC-GUUACC Zbtb38 rno-miR-204 594 622 -UCCGUA----UCCU---ACUGUUUCCCUU- |||||| :||| |||| ||||| GAGGCAUGUCCGGGAGCAUGAC---GGGAAA Zbtb38 rno-miR-205 10 34 GUCUG--AGGCCACCUUACUUCCU- :|| || |||||: |||||| AGGAAAGUCAAGUGGAG-GAAGGAA Zbtb38 rno-miR-207 34 63 -UUCCCUCCUCU-CGGU---CCUCUUCG- :|||||| ||| ||| ||: :|| CGAGGGAGCAGAAGCCCCGUGGGUCGGCG Zbtb38 rno-miR-20a 664 697 -GAUGG-------ACGUGAUA---UUCGUGAAAU ||:|| ||||| |||||||| GCUGCCCUCAGAAUGCACCAAAAGAAGCACUUA- Zbtb38 rno-miR-20a* 378 404 -ACAUUCA---CGAGCA-UUACGUCA |||::| |||: |:||||| CUGUGGGCGGCGCUUCUCAGUGCAGG Zbtb38 rno-miR-20b 364 394 -UGG--ACGU----GAUACUCG---UGAAAC ||| |||| ||:||:|| :||| UACCAGUGCAAGACCUGUGGGCGGCGCUUC- Zbtb38 rno-miR-20b* 182 204 GUCUUCACGAGUGUGACGUCA- |||: ||| || :||||||| AAGAGAUGCCCAAGCUGCAGUG Zbtb38 rno-miR-210 70 95 AGUCGG--CGACAGUGUGCGUGUC- ||||: |||| |:|||| || CCAGCUGAGCUGGAUCGCGCAGAGA Zbtb38 rno-miR-211 594 622 -UCCGUU----UCCU---ACUGUUUCCCUU- ||||| :||| |||| ||||| GAGGCAUGUCCGGGAGCAUGAC---GGGAAA Zbtb38 rno-miR-216 60 80 -GUGUCAAC-GGUCGACUCUAAU |:||| ||||||||| GCGCAGGUAUCCAGCUGAGC--- Zbtb38 rno-miR-24 68 92 GACAAGGACGACUUGACU---CG-GU- ||| |||||:|||: || || ---AUCCAGCUGAGCUGGAUCGCGCAG Zbtb38 rno-miR-27b 197 217 -CGUCUUGAAUCGGUGACACUU |||| :| |||: |||||| UGCAGUGCG-AGCU-CUGUGAC Zbtb38 rno-miR-292-3p 366 394 UGUGA-GUUUUGGA---CCGCCGUGAA- || | |||:|||| ||||||:||| CCAGUGCAAGACCUGUGGGCGGCGCUUC Zbtb38 rno-miR-296 225 245 -UGUCCUAACUCCC-CCC-CGGGA :||| :||| ||| ||| AGCAGCA---GGGGCGGGAGCCG- Zbtb38 rno-miR-298 717 741 CCUUC-UUGUCGGGAGGAGACGG- ||:| ||||| : |||:|||| AGAGGAAACAGAUGACCUUUGCCA Zbtb38 rno-miR-300 758 777 CUUCUCUCGAACGGGAACGUAU :|||||: ||||||| -UGGAGAGUCAA-CCUUGCAC- Zbtb38 rno-miR-320 83 119 AAGCGGG---------AGA---GU---UGGGUCGAAAA |||| | || || |||||||| AUCGCGCAGAGAUGGGUCGGCGCAGGUACCCAGCUG-- Zbtb38 rno-miR-324-3p 365 389 -GGUCGUCG---UGGAC-CCCGUCACC ||||: || ||||| ||||:| ACCAGU-GCAAGACCUGUGGGCGGC-- Zbtb38 rno-miR-324-5p 363 391 UGUGGUUACG----GGAUCCCCUACGC- :||||:||| |||: ||| ||| CUACCAGUGCAAGACCUGUGGGCGGCGC Zbtb38 rno-miR-326 21 57 UGACCUCCUUCC---------------CGGGUCUCC- |||||||||| |||| | || -GUGGAGGAAGGAACGAGGGAGCAGAAGCCCCGUGGG Zbtb38 rno-miR-328 79 104 UGCCUUCC-CGUCUCU-CCCGGUC- :||| | ||||||| |||:|:| CUGGAUCGCGCAGAGAUGGGUCGGC Zbtb38 rno-miR-33 185 207 GUUACG---UUGAUGUUACGUG :|||| |:||:||:|||: AGAUGCCCAAGCUGCAGUGCGA Zbtb38 rno-miR-331 208 238 AAGAUCCUAUC-------CGG-GUCCCCG- |||: || :| || ||||||| CUCUGUGACGGUGACAAAGCAGCAGGGGCG Zbtb38 rno-miR-337 592 616 -UUUCCGUAGUAUAUCCUCG-ACUU ::|||||| :| :||||| ||| CGGAGGCAU-GUCCGGGAGCAUGAC Zbtb38 rno-miR-338 56 85 -AGUUGU-UUUAG----UGACUACGACCU- ||::|: |::| :|||| |||||| GUCGGCGCAGGUAUCCAGCUGA-GCUGGAU Zbtb38 rno-miR-339 204 242 ACUCGAGGA----CC-------------UCCUGUCCCU- ||||||: || :||:| |||| CGAGCUCUGUGACGGUGACAAAGCAGCAGGGGC-GGGAG Zbtb38 rno-miR-340 58 85 -CCGAUAUUUCAU----UGACUCUGCCU- ||| |:||| :||||| :||| CGGCGC--AGGUAUCCAGCUGAGCUGGAU Zbtb38 rno-miR-343 208 243 -AGAC----CCG---------UGUGCCU-CCCUCU |||| ||: :|| ||: ||||| CUCUGUGACGGUGACAAAGCAGCAGGGGCGGGAGC Zbtb38 rno-miR-344 57 88 UGCCA-GUCCGAA-----AC-CGAUCUAGU- ||| ||||: || |||:||||: UCGGCGCAGGUAUCCAGCUGAGCUGGAUCGC Zbtb38 rno-miR-345 77 106 CGUGACCUGA------UC--CCCAGUCGU- :|||||: || |||||:||: -AGCUGGAUCGCGCAGAGAUGGGUCGGCGC Zbtb38 rno-miR-347 216 239 ACCCGCUGG---GUC-UCCCUGU- ||:||| ||| ||||:|: -CGGUGACAAAGCAGCAGGGGCGG Zbtb38 rno-miR-349 213 238 UCU-CCAA---UUCUGUCGU-CCCGAC || ||| ||| ||||| |||| UGACGGUGACAAAG-CAGCAGGGGCG- Zbtb38 rno-miR-34a 103 137 UUGUU----GGUCGAU----UCU-GUGACG-GU- :||: ||||||: ||| |:|||| || CGCAGGUACCCAGCUGAACUAGAUCGCUGCGCAG Zbtb38 rno-miR-34c 103 134 -CGUUA----GUCGAU-UGAU---GUGACGGA |||: |||||: |||| |:|||| CGCAGGUACCCAGCUGAACUAGAUCGCUGCG- Zbtb38 rno-miR-351 381 406 GUCCGAGUUUCC-CGAGGAGUC----CCU- :||| || |||:||||| ||: UGGGC-----GGCGCUUCUCAGUGCAGGGC Zbtb38 rno-miR-370 31 69 -UUGGUCCAA-GG---UGGGGU---------CGUCCG- ||| ||| | :||||: |||||: GAACGAGGGAGCAGAAGCCCCGUGGGUCGGCGCAGGUA Zbtb38 rno-miR-376b* 582 607 -UUGGUAU---CUUCCUUAUAGGUG ||||| |:||| ||:|||: GAACCACGAGCGGAGGCAUGUCCGG Zbtb38 rno-miR-422b 275 314 -CGGA----AGAC---UGAGGU--------UC-AGGUCA |||| |||| :|||:: || ||||| AGCCUUACAUCUGCGAGCUCUGUGCGAAGCAGUUCCAGA Zbtb38 rno-miR-424 643 669 AGGUUUUGUACUUAA---CGACGAC- ||||||:||| ||||||| CCCAAAAUAUGCAAAACAGCUGCUGC Zbtb38 rno-miR-431 369 408 -ACGUA--------CUGCCG-G-------ACGUUCUGU- |||| |:|||| | ||||:|:|| GUGCAAGACCUGUGGGCGGCGCUUCUCAGUGCAGGGCAA Zbtb38 rno-miR-449 111 137 UGGUCGAUUG---UUAUGUGACG-GU- ||||||:| :|| |:|||| || CCCAGCUGAACUAGAU-CGCUGCGCAG Zbtb38 rno-miR-451 205 224 -UUGAGUCAUUACCAUUGCCAAA |:||| ||:| |||:|| GAGCUCUGUGACGGUGACA---- Zbtb38 rno-miR-483 213 247 UGUUCUGCC-CU----------CCCC-UCCUCA-CU- ||||| || |||| :|||| || ---UGACGGUGACAAAGCAGCAGGGGCGGGAGCCGAA Zbtb38 rno-miR-501 427 448 AAAGUGGGUCC-CUGUUUCCUAA ||||||::|| | | |||| AUUCACCUGGGCGUGA-AGGAG- Zbtb38 rno-miR-503 456 485 -GUCAUGACA---------AGG-GCGACGAU |||||:||| |:| ||||| UCAGUAUUGUAACAAGGCUUUCACGCUGA-- Zbtb38 rno-miR-540 150 169 -GGUCCUAGCUGGAGACUGGA |||| |:||||||| CCCAGAUAAGGCCUCUGAA-- Zbtb38 rno-miR-93 362 394 -GAUGG--ACGU-------GCUUGUCGUGAAAC ||||| |||| :|::|:||:||| CCUACCAGUGCAAGACCUGUGGGCGGCGCUUC- Zbtb38 rno-miR-98 652 675 UUGUUAUGUUGAAUGAUGG-AGU- :||| |||:| |:||:|| ||| UGCAAAACAGC-UGCUGCCCUCAG Zbtb38 rno-let-7a 647 673 UUGAUAUG--UUG--GAUGAU-GGAGU || |||:| ||| ||:||: ||||| AAATATGCAAAACAGCTGCTGCCCTCA Zbtb38 rno-let-7c 647 673 UUGGUAUG--UUG--GAUGAU-GGAGU || :||:| ||| ||:||: ||||| AAATATGCAAAACAGCTGCTGCCCTCA Zbtb38 rno-let-7d 648 673 UGAUACG--UUG--GAUGAU-GGAGa | ||||| ||| ||:||: |||| AATATGCAAAACAGCTGCTGCCCTCa Zbtb38 rno-let-7f 647 673 UUGAUAUGU----UAGAUGAU-GGAGU || |||:|| | ||:||: ||||| AAATATGCAAAACAGCTGCTGCCCTCA Zbtb38 rno-let-7i 650 673 uguCGUGU--UUGAUGAU-GGAGU ||| | |:||:||: ||||| tatGCAAAACAGCTGCTGCCCTCA Zbtb38 rno-miR-101a 442 466 gaagUCAA-UAG--UGUCAUGACAU |||| ||| |||||:|||| aaggAGTTCATCTGTCAGTATTGTA Zbtb38 rno-miR-122a 724 751 UGUUUG-UGGUAACAG----UGUGAGGu |||:|: ||| ||| | | ||||| ACAGATGACCTTTGCCACGAAAACTCCg Zbtb38 rno-miR-125b 86 110 aGUGU-UCAAUCC--CAGAGUCCcu |:|| || |:|| | | |||| gCGCAGAGATGGGTCGGCGCAGGta Zbtb38 rno-miR-127 225 245 UCGGUUCGAGUCUG-CCUAGGCU ||| ||| :|:| ||| |||| AGC--AGCAGGGGCGGGAGCCGA Zbtb38 rno-miR-130a 751 778 uacGGGAA------AAUUGUAACGUGAC |:||| | ||| |||||||| gatCTCTTGGAGAGTCAACCTTGCACTG Zbtb38 rno-miR-130b 751 778 uacGGGAA------AGUAGUAACGUGAC |:||| ||| | |||||||| gatCTCTTGGAGAGTCAACCTTGCACTG Zbtb38 rno-miR-133a 226 245 uGUCGACCAACUUCCCCU-GGUU |||| | |:: |||| ||:| gCAGCAG---GGGCGGGAGCCGA Zbtb38 rno-miR-133b 224 245 aUCGACCAACUUCCCCU-GGUU ||| | |:: |||| ||:| aAGCAGCAGGGGCGGGAGCCGA Zbtb38 rno-miR-137 285 308 GAUGCGC---AUAAGAAUUCGUUAu ||:|| | |:| | |||||:| CTGCGAGCTCTGTGC-GAAGCAGTt Zbtb38 rno-miR-144 444 466 gaUCAUGUAG-UAGAUAUGACAU ||| |||| :|| :||:|||| ggAGTTCATCTGTCAGTATTGTA Zbtb38 rno-miR-145 594 620 uUCCCUAAGGACCCUU---UUGACCUg ||| || :| ||||: :|| ||| gAGGCATGTCCGGGAGCATGACGGGAa Zbtb38 rno-miR-148b 759 779 ugUUUCAAGACACUACGUGACU |:|| || |||||||| ggAGAG-TCAACCTTGCACTGA Zbtb38 rno-miR-151* 370 397 AUGAUCU-GACACU-----CGAGGAGcu |:| ||| |||||: |||:||| TGCAAGACCTGTGGGCGGCGCTTCTCag Zbtb38 rno-miR-152 748 779 gGGUUCAAGA------CAGU----ACGUGACU ||:| ||| |||| |||||||| tCCGATCTCTTGGAGAGTCAACCTTGCACTGA Zbtb38 rno-miR-17 664 697 uGAUGG-------ACGUG----ACAUUCGUGAAac ||:|| ||||| | |||||||| gCTGCCCTCAGAATGCACCAAAAG-AAGCACTTat Zbtb38 rno-miR-18 662 685 auaGACGUGA-UC-UACGUGGaau |||| || || ||||||| ctgCTGCCCTCAGAATGCACCaaa Zbtb38 rno-miR-183 353 376 guCACUU-AAGAUGGUCACGGUau | ||| |||||||||| | gcGAGAAGCCCTACCAGTGCAAga Zbtb38 rno-miR-185 555 574 CUUGACGGA-A-AGAGAGGU |:::| |:| | |||||||| GGGTTTCTTATATCTCTCCA Zbtb38 rno-miR-187 470 495 gCCGA-----CGUUGUGUUCUGUGcu |||| || : ||:|||||| aGGCTTTCACGCTGAACGAGACACtc Zbtb38 rno-miR-194 512 535 AGGUGU---ACCUCAACGACAAUGu |||||| |||| || ||||| TCCACACAGGGGAGAAGC-GTTACc Zbtb38 rno-miR-200c 446 464 gguAGUAAUGGGCCGUCAUAAu |||| |:| ||||||| agtTCAT---CTGTCAGTATTg Zbtb38 rno-miR-204 595 620 UCCGUA----UCCUACUGUUUCCCUU |||||| :||| |::| ||||| AGGCATGTCCGGGAGCATGACGGGAA Zbtb38 rno-miR-205 12 32 gUCUGAGGCCACCUUACUUCCU | | || |||| | |||||| gAAAGTCAAGTGG-AGGAAGGA Zbtb38 rno-miR-207 502 529 uUCCCUCCUCUCGGU------CCUCUUCG | | | || | ||| |||||||| cACGAAAGA-ATCCACACAGGGGAGAAGC Zbtb38 rno-miR-207 24 48 uUCCCUCCU--CUCGGUCCUCUUCG ||| |||| ||| || |||||| gAGGAAGGAACGAGGGAGCAGAAGC Zbtb38 rno-miR-20a 665 697 GAUGG-------ACGUG---AUAUUCGUGAAau ||:|| ||||| | |||||||| CTGCCCTCAGAATGCACCAAAAGAAGCACTTat Zbtb38 rno-miR-20a* 379 403 ACAU---UCACGAGCA-UUACGUCa |||: :| |||: | |:||||| TGTGGGCGGCGCTTCTCAGTGCAGg Zbtb38 rno-miR-20b 365 394 UGG--ACGU----GAUAC---UCGUGAAac ||| |||| ||:|| :||:||| ACCAGTGCAAGACCTGTGGGCGGCGCTTct Zbtb38 rno-miR-211 595 626 UCCGU-------UUCCUACUG---UUUCCcuu ||||| :|| ||||| ||||| AGGCATGTCCGGGAGCATGACGGGAAAGGctt Zbtb38 rno-miR-216 61 82 GUGU-CAACGGUCGACUCUAau |:|| || ||||||||| | CGCAGGTATCCAGCTGAGCTgg Zbtb38 rno-miR-24 64 81 gaCA-AGGACGACUUGACUCGgu || ||| |:|||||| agGTATCC-----AGCTGAGCtg Zbtb38 rno-miR-27b 198 216 CGUCUUGAAUCGGUGACACUu |||| :| || | |||||| GCAGTGC-GAG-CTCTGTGAc Zbtb38 rno-miR-28 292 320 GAGUUAU-CU--GACA----CUCGAGGAa ||| :|: || | || |||||||| CTCTGTGCGAAGCAGTTCCAGAGCTCCTc Zbtb38 rno-miR-291-3p 677 696 cCGUGUGUUUCACCUUCGUGAAa |||| |||| ||||||||| tGCAC-CAAA--AGAAGCACTTa Zbtb38 rno-miR-296 226 245 uGUCCUAACUCCCCCC-CGGga ||| | |:|| ||| ||| gCAGCA--GGGGCGGGAGCCga Zbtb38 rno-miR-300 757 777 cuuCUCUCGAACGGGAACGUau ||||| | ||||||| ttgGAGAG-TCAACCTTGCAct Zbtb38 rno-miR-301 753 778 uacGAAACUGUUA--UGAUAACGUGAC ||| || |:| || |||||||| tctCTTGGAGAGTCAAC-CTTGCACTG Zbtb38 rno-miR-320 95 120 aagCGGGAGAGU---UGGGUCGAaaa |:| | || |||||||| tggGTCGGCGCAGGTACCCAGCTgaa Zbtb38 rno-miR-324-3p 366 390 GGU--CGUCGUGGAC-CCCGUCACc ||| ||| ||||| ||||:| | CCAGTGCAAGACCTGTGGGCGGCGc Zbtb38 rno-miR-326 31 55 ugacCUCCUUC--C--CGGGUCUCC ||||:|| | |||| | || gaacGAGGGAGCAGAAGCCCCGTGG Zbtb38 rno-miR-331 216 236 aagauccuauccggGUCCCCG ||||||| cggtgacaaagcagCAGGGGC Zbtb38 rno-miR-337 593 615 uuUCCGUAGUAUAUCCUCG-ACUu |||||| :| :||||| ||| ggAGGCAT-GTCCGGGAGCATGAc Zbtb38 rno-miR-338 57 83 AGUUGUUU---UAG--UGACUACGACCU ||::|: | ||| :|||| |||||| TCGGCGCAGGTATCCAGCTGA-GCTGGA Zbtb38 rno-miR-340 77 98 cCGAUAUUUCAUUGACUCUGCCu |||: | | :| ||||:|| aGCTGGATCG-CGCAGAGATGGg Zbtb38 rno-miR-343 221 242 agaccCGU-GU-GCCUCCCUCu ||| || || ||||| acaaaGCAGCAGGGGCGGGAGc Zbtb38 rno-miR-344 99 128 uGCC-AGUCC--GAAAC--C--GAUCUAGu ||| |||| | | | ||||||| tCGGCGCAGGTACCCAGCTGAACTAGATCg Zbtb38 rno-miR-345 86 104 CGUGAC-CUGAUCCCCAGUCGu ||:| | ||: |||||:|| GCGCAGAGAT---GGGTCGGCg Zbtb38 rno-miR-347 215 237 acCCGCUG---GGUC-UCCCUGu ||:||| ||| ||||:| acGGTGACAAAGCAGCAGGGGCg Zbtb38 rno-miR-34a 107 134 uugUUGGUCGAU----UCU-GUGACGgu | ||||||: ||| |:|||| ggtACCCAGCTGAACTAGATCGCTGCgc Zbtb38 rno-miR-34c 108 134 CGUUAGUCGA-UUGAU---GUGACGga |:| ||||| ||||| |:|||| GTACCCAGCTGAACTAGATCGCTGCgc Zbtb38 rno-miR-370 212 234 uugguCCAAGGUGGGGUCGUCCg ||| || ||||||| gtgacGGTGACAAAGCAGCAGGg Zbtb38 rno-miR-370 60 83 uugGUCCA-AGGUGGGGUCGUCCg ||||| |||| |: ||| || gcgCAGGTATCCAGCTGAGCTGGa Zbtb38 rno-miR-376b* 583 606 UUGGUAU---CUUCCUUAUAGGug ||||| : |:||| ||:||| AACCACGAGCGGAGGCATGTCCgg Zbtb38 rno-miR-422b 276 313 CGGA----AGAC---UGAG----GU----UC-AGGUCa |||| |||| :||| |: || ||||| GCCTTACATCTGCGAGCTCTGTGCGAAGCAGTTCCAGa Zbtb38 rno-miR-431 352 378 aCGUACUGCCGG------ACGUUCUGu ||: || | || |||||||| gGCGAGAAGCCCTACCAGTGCAAGACc Zbtb38 rno-miR-431 379 406 ACGUACUGCCG------G--ACGUUCUGU ||:: |:|||| | ||||:|:|| TGTG-GGCGGCGCTTCTCAGTGCAGGGCA Zbtb38 rno-miR-451 194 221 UUGA-GUCAU-UAC----CAUUGCCAaa |:|| ||||: : | ||:||||| AGCTGCAGTGCGAGCTCTGTGACGGTga Zbtb38 rno-miR-483 221 244 UGUUCUGCCCUCCCC-UCCUCacu |||| :| | ||||| :|||| ACAAAGCAGCAGGGGCGGGAGccg Zbtb38 rno-miR-501 427 448 aAAGUGGGUCCCUGUUUCCUaa ||||||::|| :::||||| aTTCACCTGGGCGTGAAGGAgt Zbtb38 rno-miR-503 457 486 GUCAUGAC----------AAGGGCGACgau |||||:|| ||| ||||| CAGTATTGTAACAAGGCTTTCACGCTGaac Zbtb38 rno-miR-540 151 170 GGUCCUA-GCUGGAGACUgga ||| ||| |:||||||| CCA-GATAAGGCCTCTGAaga Zbtb38 rno-miR-93 363 394 GAUGG--ACGUGCU-------UGUCGUGAAac ||||| |||| || :|:||:||| CTACCAGTGCAAGACCTGTGGGCGGCGCTTct Zbtb38 rno-miR-130a 771 778 UACGG-GAAAA---------------------UUGUAACGUGAC |||| | ||| |||||||| -UGCCACGAAAACUCCGAUCUCUUGGAGAGUCAACCUUGCACUGA Zbtb38 rno-miR-130b 771 778 UACGGGAA----------------------AGUAGUAACGUGAC |||| ||| | |||||||| -UGCCACGAAAACUCCGAUCUCUUGGAGAGUCAACCUUGCACUGA Zbtb38 rno-miR-138 256 263 CUAAG----------------------UGUU----GUGGUCGA :||| ||||||| ACAAAGCAGCAGGGGCGGGAGCCGAAGGCAAGCCCCACCAGCA Zbtb38 rno-miR-148b 772 779 ----------------------UGUUUCAAGACACUACGUGACU : |:||| | |||||||| GCCACGAAAACUCCGAUCUCUUGGAGAGU-CAACCUUGCACUGAU Zbtb38 rno-miR-152 772 779 -----------GGGUUCAAGA------CAGU----ACGUGACU :||:| ||| |||| |||||||| GCCACGAAAACUCCGAUCUCUUGGAGAGUCAACCUUGCACUGAU Zbtb38 rno-miR-185 567 574 -----------CUUGACGGAA--------------AGAGAGGU | ||||:|| |||||||| UACCACUGUCAGUUCUGCUUUCAGGGUUUCUUAUAUCUCUCCAC Zbtb38 rno-miR-200c 457 464 G-GUAGUAA-UGGGCC--------------------GUCAUAAU |: |||| |||:|| |||||||: AGCG-CAUUCACCUGGGCGUGAAGGAGUUCAUCUGUCAGUAUUGU Zbtb38 rno-miR-207 522 529 UUCCCUCC--UCUCGG------------------UCCUCUUCG ||| || :|||||||| GAGACACUCAAGAUCCACGAAAGAAUCCACACAGGGGAGAAGCG Zbtb38 rno-miR-28 313 320 -------GA-GUUAUCUGACA--------------CUCGAGGAA || |:| |||| |||||||| CUUACAUCUGCGAGCU-CUGUGCGAAGCAGUUCCAGAGCUCCUC Zbtb38 rno-miR-291-3p 689 696 C-----------------------CGUGUGUUUCACCUUCGUGAAA |||| |||| ||||||||| CAAAACAGCUGCUGCCCUCAGAAUGCAC-CAAAA--GAAGCACUUA Zbtb38 rno-miR-301 771 778 UAC-----------------GAAACUGUUAUGAU-AACGUGAC ||| || |:| |||||||| UGCCACGAAAACUCCGAUCUCUUGGAGAGUCAACCUUGCACUGA Zbtb38 rno-miR-344 121 128 UG---------CCAGUCCGAAACC------------GAUCUAGU |||| ||| || |||||||: GCGCAGAGAUGGGUC-GGCGCAGGUACCCAGCUGAACUAGAUCGC Zbtb38 rno-miR-370 227 234 ----------------------UUGGUCCAAGGUGGGGUCGUCCG :|| ||| || ||||||| CAAGCUGCAGUGCGAGCUCUGUGAC--GGUGACAAAGCAGCAGGG Zbtb38 rno-miR-431 371 378 -------ACGU----ACUGC----CGG-------ACGUUCUGU ||| ||:|| ||| |||||||| CAUGAGAUGCCACACUGGCGAGAAGCCCUACCAGUGCAAGACC

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Zbtb38 RAID00336298 rno-miR-21-5p miRNA MIMAT0000790 Zbtb38 mRNA 315936 Prediction 0.1828 Zbtb38 RAID01471431 rno-miR-7b miRNA MIMAT0000780 Zbtb38 mRNA 315936 Prediction 0.1828 Zbtb38 RAID01493025 rno-miR-495 miRNA MIMAT0005320 Zbtb38 mRNA 315936 Prediction 0.1828 Zbtb38 RAID01844450 rno-miR-501-5p miRNA MIMAT0003116 Zbtb38 mRNA 315936 Prediction 0.1828 Zbtb38 RAID02243546 rno-miR-33-5p miRNA MIMAT0000812 Zbtb38 mRNA 315936 Prediction 0.1828 Zbtb38 RAID02977641 rno-miR-7a-5p miRNA MIMAT0000606 Zbtb38 mRNA 315936 Prediction 0.1828 Zbtb38 RAID03624149 rno-miR-350 miRNA MIMAT0000604 Zbtb38 mRNA 315936 Prediction 0.1828