DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015094 cel-miR-37* 173985 ehs-1 cguggcguugccuGUGGGUGu :|||||| aauaauuauaccuUACCCACu 2 9 122 142 [ce6:II:5823572-5823592:+] 0.5679 124 6 -13.67 -0.1245 MIMAT0015104 cel-miR-63* 173985 ehs-1 acugauggcUGCUCAAUcu |:|||||| auguaaauuAUGAGUUAua 3 11 221 239 [ce6:II:5823787-5823805:+] 0.5449 126 0 -7.75 -0.2711 MIMAT0015104 cel-miR-63* 173985 ehs-1 acugauggcUGCUCAAUcu |:|||||| auguaaauuAUGAGUUAua 3 11 337 355 [ce6:II:5823787-5823805:+] 0.5449 126 0 -7.75 -0.2352 MIMAT0015107 cel-miR-71* 173985 ehs-1 cgcuuuuugucuuAUCACUau |||||| ---------gucuUAGUGAgu 3 9 1 12 [ce6:II:5823451-5823462:+] 0.7235 120 0 -4.95 -0.1602 MIMAT0015111 cel-miR-124* 173985 ehs-1 ugauuucagugaucccACGUACg |||||| cuguagaauaugaauaUGCAUGa 2 8 193 215 [ce6:II:5823759-5823781:+] 0.5449 120 6 -9.97 -0.4265 MIMAT0015111 cel-miR-124* 173985 ehs-1 ugauuucagugaucccACGUACg |||||| cuguagaauaugaauaUGCAUGa 2 8 309 331 [ce6:II:5823759-5823781:+] 0.5449 120 6 -9.97 -0.4280 MIMAT0004228 cel-miR-793 173985 ehs-1 agACAGAUUGAUUCUAUGGAGu | |:|||: | ||||||: gaUUUUUAAUAAUUAUACCUUa 2 21 115 136 [ce6:II:5823565-5823586:+] 0.5679 144 0 -10.88 -0.1176 MIMAT0005033 cel-miR-1020 173985 ehs-1 gacuuucacaGUGUCUUAUua :::|||||| uguuauauacUGUAGAAUAug 3 12 184 204 [ce6:II:5823750-5823770:+] 0.5449 123 0 -6.26 -0.1250 MIMAT0005033 cel-miR-1020 173985 ehs-1 gacuuucacaGUGUCUUAUua :::|||||| uguuauauacUGUAGAAUAug 3 12 300 320 [ce6:II:5823750-5823770:+] 0.5449 123 0 -6.26 -0.1148 MIMAT0006770 cel-miR-1829b 173985 ehs-1 auGUUGGUAGAUCUUCU-AGCGAa |||||: || :|| ||||| cuCAACCGGCU---GGAUUCGCUg 2 22 64 84 [ce6:II:5823514-5823534:+] 0.5679 121 0 -23.07 -0.2978 MIMAT0011449 cel-miR-1832b* 173985 ehs-1 uuucacccGGCUCG-CUAAGCGAc |||: : |||||||| caacucaaCCGGCUGGAUUCGCUg 2 16 61 84 [ce6:II:5823511-5823534:+] 0.5679 150 7 -23.26 -0.1370 MIMAT0011450 cel-miR-1832b 173985 ehs-1 uagUCGCUUAGCGAGACGGGUga | :| |: ||:|||||| caaAUUGUUUUACUUUGCCCAaa 3 21 45 67 [ce6:II:5823611-5823633:+] 0.5449 136 0 -16.57 -0.1234 MIMAT0011450 cel-miR-1832b 173985 ehs-1 uagUCGCUUAGCGAGACGGGUga | :| |: ||:|||||| caaAUUGUUUUACUUUGCCCAaa 3 21 161 183 [ce6:II:5823611-5823633:+] 0.5449 136 0 -16.57 -0.1090 MIMAT0011455 cel-miR-2218a 173985 ehs-1 acuccgaauuuugaacAUCAAAc |||||| ugcacauuuuuaagauUAGUUUu 2 8 105 127 [ce6:II:5823671-5823693:+] 0.5449 120 6 -6.54 -0.1351 MIMAT0011455 cel-miR-2218a 173985 ehs-1 acuccgaauuuugaacAUCAAAc |||||| ugcacauuuuuaagauUAGUUUu 2 8 221 243 [ce6:II:5823671-5823693:+] 0.5449 120 6 -6.54 -0.1212 MIMAT0011462 cel-miR-2220 173985 ehs-1 gacauucagguguuuGUUAACu |||||| cuuuggaucggcuuuCAAUUGa 2 8 95 116 [ce6:II:5823545-5823566:+] 0.5679 120 6 -12.95 -0.2170 MIMAT0000032 cel-miR-60 173985 ehs-1 acUUGAUCUUUUA--CACG-UAUUAu :::|| :|||| | || ||||| uaGGUUAUGAAAUCAGAGCAAUAAUg 2 22 160 185 [ce6:II:5823726-5823751:+] 0.5449 124 0 -8.22 -1.0749 MIMAT0000032 cel-miR-60 173985 ehs-1 acUUGAUCUUUUA--CACG-UAUUAu :::|| :|||| | || ||||| uaGGUUAUGAAAUCAGAGCAAUAAUg 2 22 276 301 [ce6:II:5823726-5823751:+] 0.5449 124 0 -8.22 -1.0465 MIMAT0000289 cel-miR-234 173985 ehs-1 uuCCCAUA--AGAG-CUCGUUAUu || ||| || |||||||| uaGGUUAUGAAAUCAGAGCAAUAa 2 20 160 183 [ce6:II:5823726-5823749:+] 0.5449 149 7 -18.32 -1.1014 MIMAT0000289 cel-miR-234 173985 ehs-1 uuCCCAUA--AGAG-CUCGUUAUu || ||| || |||||||| uaGGUUAUGAAAUCAGAGCAAUAa 2 20 276 299 [ce6:II:5823726-5823749:+] 0.5449 149 7 -18.32 -1.0749 MIMAT0000296 cel-miR-240 173985 ehs-1 ucgcuucuaaaccccCGGUCAu |||||| acuauaagccccaacGCCAGUc 2 8 24 45 [ce6:II:5823590-5823611:+] 0.5564 120 6 -8.17 -0.1400 MIMAT0000296 cel-miR-240 173985 ehs-1 ucgcuucuaaaccccCGGUCAu |||||| acuauaagccccaacGCCAGUc 2 8 140 161 [ce6:II:5823590-5823611:+] 0.5564 120 6 -8.17 -0.1237 MIMAT0000310 cel-miR-254 173985 ehs-1 ggAUGUCAGCGCUUUCUAAACGu ||:| | |: || ||||||| aaUAUA-UAGUAAAUGAUUUGCa 2 22 239 260 [ce6:II:5823805-5823826:+] 0.5114 159 7 -15.12 -1.2299 MIMAT0000310 cel-miR-254 173985 ehs-1 ggAUGUCAGCGCUUUCUAAACGu ||:| | |: || ||||||| aaUAUA-UAGUAAAUGAUUUGCa 2 22 355 376 [ce6:II:5823805-5823826:+] 0.5114 159 7 -15.12 -1.2756 MIMAT0004219 cel-miR-784 173985 ehs-1 agaugcaugcgucuaACACGGu |||||| gcccaaauguuuaccUGUGCCa 2 8 61 82 [ce6:II:5823627-5823648:+] 0.5449 120 6 -15.51 -0.1123 MIMAT0004219 cel-miR-784 173985 ehs-1 agaugcaugcgucuaACACGGu |||||| gcccaaauguuuaccUGUGCCa 2 8 177 198 [ce6:II:5823627-5823648:+] 0.5449 120 6 -15.51 -0.1003 MIMAT0004225 cel-miR-790 173985 ehs-1 gcgccACAAGCGCUCACGGUUc ||||: | ||||||| ccaaaUGUUUACCUGUGCCAAg 2 18 63 84 [ce6:II:5823629-5823650:+] 0.5449 157 7 -20.34 -0.8416 MIMAT0004225 cel-miR-790 173985 ehs-1 gcgccACAAGCGCUCACGGUUc ||||: | ||||||| ccaaaUGUUUACCUGUGCCAAg 2 18 179 200 [ce6:II:5823629-5823650:+] 0.5449 157 7 -20.34 -0.8012 MIMAT0004226 cel-miR-791 173985 ehs-1 acggaAUAGACGCCUCACGGUUu |:|:| | ||||||| ccaaaUGUUUAC-CUGUGCCAAg 2 19 63 84 [ce6:II:5823629-5823650:+] 0.5449 144 7 -13.65 -0.8486 MIMAT0004226 cel-miR-791 173985 ehs-1 acggaAUAGACGCCUCACGGUUu |:|:| | ||||||| ccaaaUGUUUAC-CUGUGCCAAg 2 19 179 200 [ce6:II:5823629-5823650:+] 0.5449 144 7 -13.65 -0.8084

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-124 68 83 ACCGUAAGUGGCGCACGGAAU :||:||| :||||| ---UGUUUACC-UGUGCCA-- ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-234 160 185 UUCCCAUAAG--AG-CUCGUUAUU- ||| ||| || ||||||||| UAGGUUAUGAAAUCAGAGCAAUAAU ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-249 59 81 CCGUUGCGAGUUUUCA---GGACACU :|| |||| || |||||| ----UUGCCCAAAUGUUUACCUGUGC ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-254 242 262 GGAUGUCAGCGCUUUCUAAACGU- ||:||| |||||||| -AUAUAGUAAAU---GAUUUGCAG ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-784 57 84 -AGAUGCA--UGCGUCUA-ACACGGU- |:|:| |:|: ||||||| CUUUGCCCAAAUGUUUACCUGUGCCAA ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-790 60 86 GCGCC---ACAAGCGCUCACGGUUC- || ||||: |||||||| UGCCCAAAUGUUUACCUGUGCCAAGU ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-791 59 86 -ACGGAAUAGACGCCU---CACGGUUU- |||| ||: |||||||: UUGCCCAAA-UGUUUACCUGUGCCAAGU ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-87 36 67 CGUGUGG--------ACUU--UGAAACGAGUG ||:|| || ||||||| || -AACGCCAGUCAAAUUGUUUUACUUUGCCCAA ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-124 65 84 accguAAGUGGCGCACGGaau ||:||| :||||| aaatgTTTACC-TGTGCCaag ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-234 160 183 uUCCCAUA--AGAG-CUCGUUAUU ||| ||| || ||||||||| tAGGTTATGAAATCAGAGCAATAA ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-249 55 80 ccguugCGAGUUUUC---AGGACACu || |||| | |||||| tactttGCCCAAATGTTTACCTGTGc ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-254 239 260 ggAUGUCAGCGCUUUCUAAACGU ||:| | |: || |||||||| aaTATA-TAGTAAATGATTTGCA ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-784 61 82 agaugcaugcgucuaACACGGU ||||||| gcccaaatgtttaccTGTGCCA ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-790 63 84 gcgccACAAGCGCUCACGGUUC ||||: | |||||||| ccaaaTGTTTACCTGTGCCAAG ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-791 60 84 ACGG---AAUAGACGCCUCACGGUUu |||| |:|:| | ||||||| TGCCCAAATGTTTAC-CTGTGCCAAg ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-87 35 66 cgUGUGGAC---UU-------UGAAACGAGUg ||:|| | || ||||||| || caACGCCAGTCAAATTGTTTTACTTTGCCCAa ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-234 176 183 U-------------------UCCCAUAAG--AG-CUCGUUAUU ||| ||| || ||||||||| ACUUGAAUUGUCACUUUUCUAGGUUAUGAAAUCAGAGCAAUAAU ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-254 253 260 GG-----------------------AUGUCAGCGCUUUCUAAACGU ||:||| |||||||| AUUAUGUAAAUUAUGAGUUAUAAUAUAUAGUAAAU---GAUUUGCAG ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-790 77 84 ------------------GCGCC---ACAAGCGCUCACGGUUC :|| |||| | |||||||| AGUCAAAUUGUUUUACUUUGCCCAAAUGUUUACCUGUGCCAAGU ehs-1; CELE_ZK1248.3; ZK1248.3 cel-miR-791 77 84 --------ACGGAAU-AGACGCCU-----------CACGGUUU ||::||| |:||| |||||||: AGUCAAAUUGUUUUACUUUGCCCAAAUGUUUACCUGUGCCAAGU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ehs-1 RAID00148217 cel-miR-240-3p miRNA MIMAT0000296 ehs-1 mRNA 173985 Prediction 0.2202 ehs-1 RAID00500434 cel-miR-86-5p miRNA MIMAT0000059 ehs-1 mRNA 173985 Prediction 0.1828 ehs-1 RAID00532138 cel-miR-254-3p miRNA MIMAT0000310 ehs-1 mRNA 173985 Prediction 0.1828 ehs-1 RAID01157120 cel-miR-784-5p miRNA MIMAT0004219 ehs-1 mRNA 173985 Prediction 0.2202 ehs-1 RAID01204873 cel-miR-234-3p miRNA MIMAT0000289 ehs-1 mRNA 173985 Prediction 0.2381 ehs-1 RAID01488854 cel-miR-791-3p miRNA MIMAT0004226 ehs-1 mRNA 173985 Prediction 0.1828 ehs-1 RAID02730214 cel-miR-790-5p miRNA MIMAT0004225 ehs-1 mRNA 173985 Prediction 0.1828 ehs-1 RAID03287567 cel-miR-60-3p miRNA MIMAT0000032 ehs-1 mRNA 173985 Prediction 0.2202