DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015116 cel-miR-240* 175902 tag-182 guAAGAUCAGAGUUUUAGGAGc | :|| | |: | |||||| gaUGUUACUAUUCAUAUCCUCa 2 21 42 63 [ce6:III:6378993-6379014:+] 0.4309 128 6 -13.08 -0.1530 MIMAT0000315 cel-miR-260 175902 tag-182 gaUGUUC-UCAAGCUGUAGUg ||| | | | : |||||| uuACAUGCACUAUCACAUCAa 2 19 16 36 [ce6:III:6378967-6378987:+] 0.4309 121 6 -9.83 -0.2269 MIMAT0015241 cel-miR-797* 175902 tag-182 uaaagugucuUUGGUUACUUuu |||:|||||| ugcuuguuuuAACUAAUGAAua 3 13 129 150 [ce6:III:6379080-6379101:+] 0.4309 136 0 -9.39 -0.1384 MIMAT0005033 cel-miR-1020 175902 tag-182 gacuuucacaguguCUUAUUa |||||| uuguuuuaacuaauGAAUAAa 2 8 132 152 [ce6:III:6379083-6379103:+] 0.4309 120 6 -3.46 -0.2182 MIMAT0011460 cel-miR-2219 175902 tag-182 gaAGUC--GAAAGGGAGCGUGA-AGc |:|| :|||: | :||||| || uaUUAGAUUUUUUACAUGCACUAUCa 2 22 5 30 [ce6:III:6378956-6378981:+] 0.4309 124 0 -13.11 -1.2244 MIMAT0000024 cel-miR-53 175902 tag-182 ucgugccuuuGUUUACAUGCC-CAc ||| ||||||| || uucauauccuCAAUUGUACGGUGUa 2 15 52 76 [ce6:III:6379003-6379027:+] 0.4309 126 0 -16.04 -0.9909 MIMAT0000042 cel-miR-70 175902 tag-182 uaccuuugugguugcUGCAUAAu ||||||| --------------aACGUAUUa 2 9 1 9 [ce6:III:6378952-6378960:+] 0.4309 140 7 -11.10 -0.7215 MIMAT0000285 cel-miR-230 175902 tag-182 agaGGACCAGC-GUGUUGAUUAUg ::|| |:| : :|||||||: cggUUUGCUUGUUUUAACUAAUGa 2 21 124 147 [ce6:III:6379075-6379098:+] 0.4309 139 0 -14.12 -0.2165

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 nfx-1; tag-182; C16A3.7 cel-miR-248 55 78 ACUCGCAAUAGGC----ACGUG-CACAUA ||||| ||:|| ||||| ------AUAUCCUCAAUUGUACGGUGUAA nfx-1; tag-182; C16A3.7 cel-miR-53 66 96 UCGUGCCU--UUGUUUA--------CAUGCCCAC |:|||| ||||: |||| UGUACGGUGUAACAGUUUGUUUCAAGUACA---- nfx-1; tag-182; C16A3.7 cel-miR-55 59 78 -GAGUCGUCUUUGAAUAUGCC-CAU- |||| ||:||||| ||| CCUCAA-------UUGUACGGUGUAA nfx-1; tag-182; C16A3.7 cel-miR-796 45 91 -AAUGAUU------GGAGUUGAU---------------GUAAGGU |||||| ||||||:|: ::||:|| GUUACUAUUCAUAUCCUCAAUUGUACGGUGUAACAGUUUGUUUCAA nfx-1; tag-182; C16A3.7 cel-miR-248 49 77 acucgcaAUAGG----CACGUG-CACAUa ||||| ||:|| ||||| ctattcaTATCCTCAATTGTACGGTGTAa nfx-1; tag-182; C16A3.7 cel-miR-392 25 48 agUAGUGU-G-CACUAGCUACUAU |||||| | | |||||| || ctATCACATCAATTTTCGATGTTA nfx-1; tag-182; C16A3.7 cel-miR-53 52 76 ucgugccuuuGUUUACAUGCC-CAc ||| ||||||| || ttcatatcctCAATTGTACGGTGTa nfx-1; tag-182; C16A3.7 cel-miR-55 53 76 gagucgucuuUGAAUAUGCC-CAU | ||:||||| ||| tcatatcctcAATTGTACGGTGTA nfx-1; tag-182; C16A3.7 cel-miR-796 78 100 aaugAUUGGAGUUGAUGUAAGGu | :::|||| ||||||:| cagtTTGTTTCAAGTACATTTCc

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score nfx-1 RAID01540790 cel-miR-230-3p miRNA MIMAT0000285 nfx-1 mRNA 175902 Prediction 0.1828 nfx-1 RAID02527264 cel-miR-70-3p miRNA MIMAT0000042 nfx-1 mRNA 175902 Prediction 0.1828 nfx-1 RAID02550872 cel-miR-53-5p miRNA MIMAT0000024 nfx-1 mRNA 175902 Prediction 0.1828