DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015112 cel-miR-229* 181058 sdpn-1 gaUACUGUGGGCUAUGGA-AAGa || |||:| | |||| ||| uuAU-ACAUCAAACACCUAUUCc 2 21 47 68 [ce6:X:7989072-7989093:-] 0.5196 122 0 -12.56 -1.0827 MIMAT0000315 cel-miR-260 181058 sdpn-1 gauguucucaagcUGUAGUg |||||| auuauuaauuuauACAUCAa 2 8 38 57 [ce6:X:7989083-7989102:-] 0.5196 120 6 -6.30 -0.3115 MIMAT0015240 cel-miR-788* 181058 sdpn-1 gcuAAGAUUAGGUAAAGg ||:| :|||||| uuuUUUUUUGUCAUUUCa 2 16 96 113 [ce6:X:7989027-7989044:-] 0.5196 131 6 -8.39 -0.2092 MIMAT0006587 cel-miR-1820 181058 sdpn-1 cuuGUAGUAGCUUUUUGU-UAGUUUu :||:||: | |:| |||||| cuuUAUUAUUAAUUUAUACAUCAAAc 2 23 34 59 [ce6:X:7989081-7989106:-] 0.5196 126 6 -6.19 -1.1020 MIMAT0011444 cel-miR-2214 181058 sdpn-1 uugcGGCCAGUUCAACA---ACAGUUAc |:| ||: || | ||||||| uaauCUGUUCGCUUUCUAUCUGUCAAUg 2 22 127 154 [ce6:X:7988986-7989013:-] 0.5196 148 7 -14.68 -0.7410 MIMAT0011444 cel-miR-2214 181058 sdpn-1 uugcggccAGUUCAAC--AACAGUUAc ||| ||| || ||||| uguauacuUCAUAUUGUAUUUUCAAUa 2 18 220 246 [ce6:X:7988894-7988920:-] 0.5196 124 0 -6.06 -0.1328 MIMAT0011444 cel-miR-2214 181058 sdpn-1 uugcggccaguucaacaaCAGUUAc |||||| ---aucuuaaugcuaauaGUCAAUa 2 8 1 22 [ce6:X:7989118-7989139:-] 0.5196 120 6 -8.76 -0.4362 MIMAT0000035 cel-miR-63 181058 sdpn-1 aaAGGUUG-AGCGAAGUCACAGUAu |:|::: |: :||: |||||| caUUCGGUGUUUUUUUUUUGUCAUu 2 23 86 110 [ce6:X:7989030-7989054:-] 0.5196 125 6 -12.56 -0.1244 MIMAT0000036 cel-miR-64 181058 sdpn-1 aaGCCAUUGCGAAGUCACAGUAu ||||: : :||: |||||| uuCGGUGUUUUUUUUUUGUCAUu 2 22 88 110 [ce6:X:7989030-7989052:-] 0.5196 133 6 -18.74 -0.1269 MIMAT0000037 cel-miR-65 181058 sdpn-1 aaGCCAAUGCGAAGUCACAGUAu |||| : :||: |||||| uuCGGUGUUUUUUUUUUGUCAUu 2 22 88 110 [ce6:X:7989030-7989052:-] 0.5196 129 6 -17.33 -0.1257 MIMAT0000038 cel-miR-66 181058 sdpn-1 aguguagggauuagucACAGUAc |||||| uucgguguuuuuuuuuUGUCAUu 2 8 88 110 [ce6:X:7989030-7989052:-] 0.5196 120 6 -8.80 -0.1257 MIMAT0000284 cel-miR-229 181058 sdpn-1 gcuaccuuuucuauuggucACAGUAa |||||| ucauucgguguuuuuuuuuUGUCAUu 2 8 85 110 [ce6:X:7989030-7989055:-] 0.5196 120 6 -12.14 -0.1232 MIMAT0000285 cel-miR-230 181058 sdpn-1 agaggaccAGCGUGUUGAUUAUg || :| :|||||| -------aUCUUAAUGCUAAUAg 2 16 1 16 [ce6:X:7989124-7989139:-] 0.5196 131 6 -4.91 -0.3660 MIMAT0000307 cel-miR-251 181058 sdpn-1 uuauucucgccguggUGAUGAAUu ::|||||| auguuucuuuugaaaGUUACUUAu 2 10 152 175 [ce6:X:7988965-7988988:-] 0.5196 125 6 -9.40 -0.1045 MIMAT0000308 cel-miR-252 181058 sdpn-1 aauGGACGCCGUGAUGAUGAAUa :|| : | | ::|||||| guuUCUUUUG-AAAGUUACUUAu 2 21 154 175 [ce6:X:7988965-7988986:-] 0.5196 126 6 -8.86 -0.1045 MIMAT0004227 cel-miR-792 181058 sdpn-1 agacuuucaacuucucUAAAGUu |||||| guguuuuuuuuuugucAUUUCAa 2 8 92 114 [ce6:X:7989026-7989048:-] 0.5196 120 6 -4.87 -0.2140

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score sdpn-1 RAID00040640 cel-miR-251 miRNA MIMAT0000307 sdpn-1 mRNA 181058 Prediction 0.1828 sdpn-1 RAID00111594 cel-miR-792-3p miRNA MIMAT0004227 sdpn-1 mRNA 181058 Prediction 0.1828 sdpn-1 RAID00435679 cel-miR-230-3p miRNA MIMAT0000285 sdpn-1 mRNA 181058 Prediction 0.1828 sdpn-1 RAID00634925 cel-miR-63-3p miRNA MIMAT0000035 sdpn-1 mRNA 181058 Prediction 0.1828 sdpn-1 RAID01154034 cel-miR-65-5p miRNA MIMAT0000037 sdpn-1 mRNA 181058 Prediction 0.1828 sdpn-1 RAID01732663 cel-miR-252-5p miRNA MIMAT0000308 sdpn-1 mRNA 181058 Prediction 0.1828 sdpn-1 RAID02980282 cel-miR-64-5p miRNA MIMAT0000036 sdpn-1 mRNA 181058 Prediction 0.1828 sdpn-1 RAID03349337 cel-miR-229-5p miRNA MIMAT0000284 sdpn-1 mRNA 181058 Prediction 0.1828 sdpn-1 RAID03393165 cel-miR-66-5p miRNA MIMAT0000038 sdpn-1 mRNA 181058 Prediction 0.1828