iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s07520	POPTR_0015s07520.2	POPTR_0015s07520.2
POPTR_0015s07520	POPTR_0015s07520.1	POPTR_0015s07520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.90e-53	179.5	8	143

Active Site

Position(s)	Description	Evidence
88	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           Rl++++k+l++dpp+gis  p+d+ +++ w+++i+Gp+dtp++gg+Fkl+++f+edYP kPP+v+f++++fhPn+y++G++Cl+il+  ++
   Q: 8    RLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLHFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQ 95
           9**********************9.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvre 139
           Wsp ++v+ +l+siqsll++pnp+sp+n+eaa+++++ ++ey+++vre
   Q: 96   WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSETKREYNRRVRE 143
           *********************************************985 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLTLHFS 60
EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY DVAAILTSIQ SLLCDPNPNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGTTTTACC GGCAGTGAAA GTGAATTAGA TAGGTAGGGA CGGAATCGGA TGAGTCGGTC 60
TCTTCACGCA CTCAATAAGC CGAGCATCAT CCATCCAATC CATTCCAATT TCTTTACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006281--P:DNA repair
GO:0033523--P:histone H2B ubiquitination
GO:0016574--P:histone ubiquitination
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0010228--P:vegetative to reproductive phase transition of meristem

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008139	Aspergillus clavatus	66.44	4.00e-61	226.00
IUUC-Afl-008551	Aspergillus flavus	66.44	4.00e-61	226.00
IUUC-Afu-008980	Aspergillus fumigatus	66.44	4.00e-61	226.00
IUUC-Ang-009554	Aspergillus niger	66.44	4.00e-61	226.00
IUUC-Aor-010242	Aspergillus oryzae	66.44	4.00e-61	226.00
IUUC-Ate-010390	Aspergillus terreus	66.44	4.00e-61	226.00
IUUC-Cre-022822	Chlamydomonas reinhardtii	78.29	6.00e-62	229.00
IUUC-Dse-031487	Dothistroma septosporum	66.44	1.00e-61	228.00
IUUC-Ggr-039875	Gaeumannomyces graminis	65.79	3.00e-62	229.00
IUUC-Mor-057087	Magnaporthe oryzae	64.23	3.00e-54	203.00
IUUC-Mpo-057498	Magnaporthe poae	65.79	3.00e-62	230.00
IUUC-Nfi-068580	Neosartorya fischeri	66.44	4.00e-61	226.00
IUUC-Pno-094935	Phaeosphaeria nodorum	66.44	7.00e-62	228.00
IUUC-Pte-104378	Pyrenophora teres	67.11	3.00e-62	229.00
IUUC-Pyt-104757	Pyrenophora triticirepentis	67.11	3.00e-62	229.00
IUUC-Tme-127148	Tuber melanosporum	68.46	1.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence