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Tag Content
UUCD2 ID IUUC-Aly-005806
UUCD1 version UUC-ArL-00975
Ensembl Protein ID scaffold_102015.1
UniProt Accession D7KGA6; D7KGA6_ARALL
Genbank Protein ID EFH66518.1
Protein Name Putative uncharacterized protein
Genbank Nucleotide ID GL348713
Gene Name ATARCA; ARALYDRAFT_889221
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_102015.1 scaffold_102015.1 scaffold_102015.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.90e-45 150.9 148 184
UBD/Beta-Prp 1.20e-71 242.0 11 233
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWDlrtg 33
    gH d+v+c++f ++ +++vs+s+D+t+kvW+l+ +
   Q: 148 GHRDWVSCVRFspNTlqPTIVSASWDKTVKVWNLSNC 184
    8***********6445677**************9765 PP
   


   UBD/Beta-Prp

   S: 6    kghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk 91
    + +h++ +t+++ +++ ++++++srd++i++w++t+ ++ r+l gh+ +v +v +s+dg++ ++gs D+ +++wdl +g ++ +
   Q: 11 MRAHTDMVTAIATpIDNADIIVSASRDKSIILWKLTKDDKaygvaQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV 102
    679999*******************************9999***9*********************************************** PP
   S: 92 ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtltgg 178
    gh+++vls++fs ++ +vs+s+drti++w++ + c ++ +gh+++v+cv+++p++ +vs+s D+tv++W+l++ kl tl g
   Q: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE-CKYTiseGGEGHRDWVSCVRFSPNTlqPTIVSASWDKTVKVWNLSNCKLRSTLAG- 192
    ******************************87543.33333448899************999789************************99. PP
   S: 179 htdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
    ht++v ++++++g ++sg++dg v lwdl +g+ +++l+
   Q: 193 HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 233
    ***********************************999886 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MAEGLVLKGT MRAHTDMVTA IATPIDNADI IVSASRDKSI ILWKLTKDDK AYGVAQRRLT 60
GHSHFVEDVV LSSDGQFALS GSWDGELRLW DLAAGVSTRR FVGHTKDVLS VAFSLDNRQI 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-005806|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATAGCTTCTT CTGTTTTTCT CGCCCTTCTT CTTTGTATTT CCGCCACCCC CGAGAAAACG 60
AAAACCCTAG CTTCAGAGGC ATCTCCAGTC ACCGAAAATG GCGGAAGGAC TCGTTTTGAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-005806|E3,WD_repeat;UBD,Beta-Prp|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0009507--C:chloroplast
GO:0022626--C:cytosolic ribosome
GO:0005634--C:nucleus
GO:0071215--P:cellular response to abscisic acid stimulus
GO:0010476--P:gibberellin mediated signaling pathway
GO:0009967--P:positive regulation of signal transduction
GO:0006417--P:regulation of translation
GO:0046686--P:response to cadmium ion
GO:0009749--P:response to glucose
GO:0042254--P:ribosome biogenesis
GO:0009845--P:seed germination
GO:0010228--P:vegetative to reproductive phase transition of meristem

KEGG aly:ARALYDRAFT_889221
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ath-007584 Arabidopsis thaliana 99.39 0.00e+00 660.00
IUUC-Ago-007720 Ashbya gossypii 48.62 1.00e-87 315.00
IUUC-Acl-008156 Aspergillus clavatus 61.11 4.00e-115 407.00
IUUC-Afl-008684 Aspergillus flavus 61.11 3.00e-116 410.00
IUUC-Afu-008867 Aspergillus fumigatus 61.42 6.00e-116 409.00
IUUC-Ani-009221 Aspergillus nidulans 61.11 2.00e-116 410.00
IUUC-Aor-010193 Aspergillus oryzae 61.11 3.00e-116 410.00
IUUC-Bgr-012064 Blumeria graminis 61.11 4.00e-117 413.00
IUUC-Bci-013862 Botrytis cinerea 61.73 5.00e-118 416.00
IUUC-Bol-015949 Brassica oleracea 96.94 0.00e+00 644.00
IUUC-Bra-016871 Brassica rapa 97.55 0.00e+00 650.00
IUUC-Cel-018335 Caenorhabditis elegans 56.84 7.00e-99 352.00
IUUC-Cin-025647 Ciona intestinalis 61.35 9.00e-116 409.00
IUUC-Csv-026027 Ciona savignyi 61.04 2.00e-115 407.00
IUUC-Cgl-026718 Colletotrichum gloeosporioides 63.73 8.00e-110 389.00
IUUC-Dme-032118 Drosophila melanogaster 63.08 4.00e-118 416.00
IUUC-Fox-037702 Fusarium oxysporum 62.65 2.00e-119 421.00
IUUC-Fso-038384 Fusarium solani 62.35 1.00e-118 418.00
IUUC-Ggr-039985 Gaeumannomyces graminis 62.04 1.00e-118 418.00
IUUC-Hvu-047683 Hordeum vulgare 69.94 4.00e-135 473.00
IUUC-Kpa-049214 Komagataella pastoris 51.24 1.00e-86 311.00
IUUC-Mor-057107 Magnaporthe oryzae 62.04 9.00e-119 419.00
IUUC-Mpo-057487 Magnaporthe poae 61.73 4.00e-118 417.00
IUUC-Mvi-060392 Microbotryum violaceum 63.89 3.00e-119 420.00
IUUC-Nfi-068344 Neosartorya fischeri 61.42 6.00e-116 409.00
IUUC-Ncr-068722 Neurospora crassa 61.42 5.00e-118 416.00
IUUC-Pno-095100 Phaeosphaeria nodorum 64.02 4.00e-82 296.00
IUUC-Pop-099345 Populus trichocarpa 85.89 3.00e-166 576.00
IUUC-Ppe-101743 Prunus persica 85.67 8.00e-166 575.00
IUUC-Sja-107971 Schizosaccharomyces japonicus 61.04 1.00e-113 401.00
IUUC-Spo-108297 Schizosaccharomyces pombe 59.82 2.00e-110 390.00
IUUC-Ssl-108479 Sclerotinia sclerotiorum 61.73 5.00e-118 416.00
IUUC-Sit-110060 Setaria italica 69.14 5.00e-136 476.00
IUUC-Stu-112775 Solanum tuberosum 81.54 2.00e-159 553.00
IUUC-Tca-120951 Theobroma cacao 86.54 6.00e-169 585.00
IUUC-Tre-121961 Trichoderma reesei 61.73 6.00e-118 416.00
IUUC-Tvi-122447 Trichoderma virens 61.73 3.00e-118 417.00
IUUC-Tae-123560 Triticum aestivum 69.94 3.00e-135 473.00
IUUC-Tur-126335 Triticum urartu 73.91 1.00e-119 422.00
IUUC-Tme-127105 Tuber melanosporum 58.88 6.00e-109 385.00
IUUC-Vda-129923 Verticillium dahliae 62.35 7.00e-118 416.00
Created Date 25-Jun-2017

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