iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bgr-012023

Ensembl Protein ID

CCU76108

UniProt Accession

N1JED4; N1JED4_BLUG1

Genbank Protein ID

CCU76108.1

Protein Name

Pre-mRNA cleavage and polyadenylation protein

Genbank Nucleotide ID

CAUH01002181

Gene Name

BGHDH14_bgh02409

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGHDH14_bgh02409	CCU76108	CCU76108

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-25	86.6	270	309
UBD/Beta-Prp	2.60e-48	163.1	210	488

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           H dsv +la   +  +ll+s+s D+t+k+WDl t ++ ks
   Q: 270  HVDSVLALASnrQHrNLLASASADKTVKLWDLNTAKCAKS 309
           77888888778755699******************99875 PP

UBD/Beta-Prp

   S: 21   dksllatgsrdgtikvwdvttgkl..............................lrsl.sgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvht 89
            ++++a+g  d  i++wd++t ++                               +   + h + v a+  +++   +l+++s D+t+k+wdl+t kc  +
   Q: 210  VSNFVAVGTFDPDIEIWDLDTIDCmypnailgqggdmpnsdseshpkkkkkkskKS-NdKYHVDSVLALASNRQHRnLLASASADKTVKLWDLNTAKCAKS 309
           5899***********************99999999998888777777766654222.22555555777776654434************************ PP
   S: 90   lkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdl.......ktgkllrtltgghtd 181
           +++h+d+v+sl+++ps    l+sGs drt+   d++  +    +  g ++ v +v+++p + n ++ ++  ++v   d+       ++ k    l+  h++
   Q: 310  YSQHSDKVCSLQWHPSEsTILLSGSYDRTVVAADMRAPESKA-PTWGVESDVEMVKWDPHNsNFFFIATEGGMVHYHDIrnapispANSKPTWVLQA-HDS 408
           ***************654999***********6666666666.666666666666666666666666666666666666555553333333333344.666 PP
   S: 182  svyslsfdsng.kelvsgsldgtvklwdlq..tgecvrtlnghtdnvksvrfspnde...rlvsgssDgsiriWdlrsgd 255
           sv   ++++    ++ +gs+d++vklw++     ++v++       v s +f p++e   rl++++s g+++iWd+ ++ 
   Q: 409  SVSAFDVNPIIpGFISTGSTDRQVKLWNILpsGPSMVVSRDLDVGKVFSANFAPDKEvgfRLAVAGSKGTVQIWDTSTNP 488
           66666665555334455666666666666653334444444455666666666443222256666666666666665543 PP

Organism

Blumeria graminis

Protein Sequence
(Fasta)

MSMITATVWV PRGVAASFPK KSEFDEEEFR RIAKLAKLQL QEANDDLDDA QKCDAIRLDS 60
KDNKSFTVEE ATSKNIQSID EHDDDLREYD LEHYDDDVLD EKDDEGSSMG IFSNFKSLVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGATGA TTACAGCTAC AGTCTGGGTA CCTCGTGGTG TTGCAGCCTC ATTTCCGAAA 60
AAGAGCGAGT TCGATGAAGA AGAGTTTCGA CGCATCGCAA AACTCGCAAA GCTTCAGTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000884	Aegilops tauschii	38.97	7.00e-65	238.00
IUUC-Aml-001975	Ailuropoda melanoleuca	34.70	6.00e-68	249.00
IUUC-Atr-002719	Amborella trichopoda	37.19	7.00e-59	219.00
IUUC-Apl-004171	Anas platyrhynchos	37.60	2.00e-68	251.00
IUUC-Aca-005184	Anolis carolinensis	34.83	1.00e-71	261.00
IUUC-Aly-005967	Arabidopsis lyrata	35.24	2.00e-71	261.00
IUUC-Ath-007642	Arabidopsis thaliana	34.76	8.00e-67	246.00
IUUC-Ago-007922	Ashbya gossypii	37.38	6.00e-76	276.00
IUUC-Acl-008064	Aspergillus clavatus	62.67	1.00e-174	603.00
IUUC-Afl-008590	Aspergillus flavus	60.48	1.00e-172	597.00
IUUC-Afu-009081	Aspergillus fumigatus	62.00	0.00e+00	633.00
IUUC-Ani-009187	Aspergillus nidulans	61.95	3.00e-180	622.00
IUUC-Aor-010018	Aspergillus oryzae	59.74	6.00e-172	595.00
IUUC-Ate-010542	Aspergillus terreus	65.52	4.00e-127	446.00
IUUC-Ame-011810	Astyanax mexicanus	35.89	7.00e-70	255.00
IUUC-Bta-012671	Bos taurus	34.71	8.00e-67	246.00
IUUC-Bci-013981	Botrytis cinerea	66.54	0.00e+00	659.00
IUUC-Bdi-014598	Brachypodium distachyon	35.32	7.00e-72	262.00
IUUC-Bol-016451	Brassica oleracea	35.10	6.00e-69	252.00
IUUC-Bra-017210	Brassica rapa	33.91	5.00e-69	253.00
IUUC-Cel-018525	Caenorhabditis elegans	30.91	6.00e-47	179.00
IUUC-Cja-018931	Callithrix jacchus	38.17	5.00e-63	233.00
IUUC-Cfa-020421	Canis familiaris	38.72	3.00e-63	233.00
IUUC-Cpo-022066	Cavia porcellus	33.52	1.00e-70	258.00
IUUC-Cre-022807	Chlamydomonas reinhardtii	36.62	5.00e-73	266.00
IUUC-Csa-024120	Chlorocebus sabaeus	34.71	8.00e-67	245.00
IUUC-Cho-024765	Choloepus hoffmanni	30.96	7.00e-39	152.00
IUUC-Cin-025441	Ciona intestinalis	33.58	1.00e-48	185.00
IUUC-Csv-025867	Ciona savignyi	38.52	3.00e-15	72.80
IUUC-Cgl-026678	Colletotrichum gloeosporioides	63.83	3.00e-180	622.00
IUUC-Cne-026879	Cryptococcus neoformans	39.12	2.00e-75	274.00
IUUC-Cme-027322	Cyanidioschyzon merolae	25.72	5.00e-28	117.00
IUUC-Dre-027584	Danio rerio	34.48	3.00e-73	267.00
IUUC-Dno-029634	Dasypus novemcinctus	34.77	8.00e-68	249.00
IUUC-Dor-030767	Dipodomys ordii	37.80	6.00e-63	233.00
IUUC-Dse-031449	Dothistroma septosporum	60.50	6.00e-172	595.00
IUUC-Dme-032070	Drosophila melanogaster	30.11	1.00e-45	175.00
IUUC-Ete-032857	Echinops telfairi	36.61	2.00e-47	181.00
IUUC-Eca-033871	Equus caballus	33.07	3.00e-59	220.00
IUUC-Eeu-034899	Erinaceus europaeus	35.24	4.00e-69	253.00
IUUC-Fca-036260	Felis catus	38.72	3.00e-63	234.00
IUUC-Fal-036704	Ficedula albicollis	38.02	8.00e-65	239.00
IUUC-Fox-037875	Fusarium oxysporum	62.95	1.00e-106	377.00
IUUC-Fso-038104	Fusarium solani	70.42	1.00e-169	587.00
IUUC-Gmo-038715	Gadus morhua	39.25	3.00e-68	250.00
IUUC-Ggr-040060	Gaeumannomyces graminis	63.35	0.00e+00	639.00
IUUC-Gga-040402	Gallus gallus	35.54	1.00e-78	285.00
IUUC-Gac-042618	Gasterosteus aculeatus	35.73	4.00e-69	253.00
IUUC-Gma-044165	Glycine max	42.46	1.00e-71	262.00
IUUC-Ggo-044778	Gorilla gorilla	34.23	4.00e-64	236.00
IUUC-Hsa-046975	Homo sapiens	38.68	1.00e-63	235.00
IUUC-Hvu-047774	Hordeum vulgare	43.56	2.00e-47	179.00
IUUC-Itr-048829	Ictidomys tridecemlineatus	38.93	3.00e-64	237.00
IUUC-Kpa-049194	Komagataella pastoris	38.70	7.00e-89	319.00
IUUC-Lch-049524	Latimeria chalumnae	34.99	7.00e-65	239.00
IUUC-Lpe-050918	Leersia perrieri	41.36	8.00e-70	255.00
IUUC-Loc-051947	Lepisosteus oculatus	36.00	5.00e-76	276.00
IUUC-Lma-053310	Leptosphaeria maculans	63.74	3.00e-177	612.00
IUUC-Laf-053737	Loxodonta africana	35.09	2.00e-69	254.00
IUUC-Mcc-054770	Macaca mulatta	34.91	2.00e-66	244.00
IUUC-Meu-056892	Macropus eugenii	37.03	1.00e-45	175.00
IUUC-Mor-057110	Magnaporthe oryzae	71.60	1.00e-172	597.00
IUUC-Mpo-057610	Magnaporthe poae	60.96	7.00e-116	408.00
IUUC-Mtr-058677	Medicago truncatula	36.80	1.00e-75	275.00
IUUC-Mla-059056	Melampsora laricipopulina	41.06	3.00e-98	350.00
IUUC-Mga-059434	Meleagris gallopavo	37.60	3.00e-67	246.00
IUUC-Mvi-060307	Microbotryum violaceum	40.81	7.00e-111	392.00
IUUC-Mmr-061729	Microcebus murinus	35.24	5.00e-66	243.00
IUUC-Mdo-062905	Monodelphis domestica	35.22	5.00e-68	249.00
IUUC-Mmu-063191	Mus musculus	35.23	2.00e-70	257.00
IUUC-Mac-064937	Musa acuminata	38.12	4.00e-73	266.00
IUUC-Mpu-066036	Mustela putorius furo	38.72	3.00e-63	234.00
IUUC-Mlu-068240	Myotis lucifugus	33.99	4.00e-63	233.00
IUUC-Nfi-068446	Neosartorya fischeri	60.83	6.00e-179	618.00
IUUC-Ncr-068630	Neurospora crassa	62.72	2.00e-168	583.00
IUUC-Nle-069444	Nomascus leucogenys	38.68	1.00e-63	235.00
IUUC-Opr-070284	Ochotona princeps	34.10	3.00e-49	187.00
IUUC-Ont-071946	Oreochromis niloticus	35.89	3.00e-72	263.00
IUUC-Oan-073312	Ornithorhynchus anatinus	38.69	1.00e-63	235.00
IUUC-Ocu-074548	Oryctolagus cuniculus	39.21	6.00e-64	236.00
IUUC-Oba-075486	Oryza barthii	35.97	2.00e-65	241.00
IUUC-Obr-076759	Oryza brachyantha	37.70	2.00e-71	260.00
IUUC-Ogu-078324	Oryza glumaepatula	37.07	5.00e-58	216.00
IUUC-Oin-079455	Oryza indica	40.44	8.00e-76	275.00
IUUC-Olo-080518	Oryza longistaminata	38.78	4.00e-64	236.00
IUUC-Ome-081585	Oryza meridionalis	35.38	2.00e-64	238.00
IUUC-Oni-082084	Oryza nivara	40.24	2.00e-71	260.00
IUUC-Opu-084114	Oryza punctata	40.24	3.00e-71	260.00
IUUC-Oru-084211	Oryza rufipogon	40.24	2.00e-71	260.00
IUUC-Osa-085974	Oryza sativa	40.44	8.00e-76	275.00
IUUC-Ola-087544	Oryzias latipes	35.81	3.00e-75	273.00
IUUC-Olu-087732	Ostreococcus lucimarinus	37.60	2.00e-63	234.00
IUUC-Oga-088626	Otolemur garnettii	35.63	2.00e-67	247.00
IUUC-Oar-089641	Ovis aries	33.98	7.00e-66	242.00
IUUC-Ptr-091379	Pan troglodytes	38.68	1.00e-63	235.00
IUUC-Pan-092669	Papio anubis	33.60	1.00e-63	234.00
IUUC-Psi-093753	Pelodiscus sinensis	37.26	1.00e-65	241.00
IUUC-Pma-094478	Petromyzon marinus	37.50	7.00e-49	185.00
IUUC-Pno-095033	Phaeosphaeria nodorum	58.61	9.00e-172	594.00
IUUC-Ppa-095650	Physcomitrella patens	40.19	5.00e-79	286.00
IUUC-Pfo-097516	Poecilia formosa	37.63	1.00e-76	278.00
IUUC-Pab-097912	Pongo abelii	37.12	4.00e-35	139.00
IUUC-Pop-099227	Populus trichocarpa	37.48	2.00e-77	281.00
IUUC-Pca-100653	Procavia capensis	38.75	3.00e-48	184.00
IUUC-Ppe-101910	Prunus persica	38.13	6.00e-77	279.00
IUUC-Pva-103106	Pteropus vampyrus	38.21	3.00e-63	233.00
IUUC-Pgr-103382	Puccinia graminis	39.53	3.00e-94	337.00
IUUC-Ptt-103725	Puccinia triticina	42.68	1.00e-43	168.00
IUUC-Pte-104400	Pyrenophora teres	59.63	5.00e-174	602.00
IUUC-Pyt-104707	Pyrenophora triticirepentis	60.33	3.00e-180	622.00
IUUC-Rno-105173	Rattus norvegicus	34.56	3.00e-68	250.00
IUUC-Sce-106279	Saccharomyces cerevisiae	40.07	2.00e-87	314.00
IUUC-Sha-106556	Sarcophilus harrisii	34.07	8.00e-69	252.00
IUUC-Sja-107920	Schizosaccharomyces japonicus	45.85	9.00e-107	378.00
IUUC-Spo-108023	Schizosaccharomyces pombe	48.82	2.00e-130	457.00
IUUC-Ssl-108635	Sclerotinia sclerotiorum	67.12	0.00e+00	645.00
IUUC-Smo-109124	Selaginella moellendorffii	36.57	5.00e-64	236.00
IUUC-Sit-110604	Setaria italica	37.23	1.00e-74	271.00
IUUC-Sly-111400	Solanum lycopersicum	37.28	1.00e-70	258.00
IUUC-Stu-112208	Solanum tuberosum	42.60	6.00e-51	192.00
IUUC-Sar-113458	Sorex araneus	43.21	2.00e-12	64.30
IUUC-Sbi-114069	Sorghum bicolor	35.62	1.00e-71	261.00
IUUC-Sre-115034	Sporisorium reilianum	38.60	3.00e-90	323.00
IUUC-Ssc-115281	Sus scrofa	38.21	4.00e-63	233.00
IUUC-Tgu-117052	Taeniopygia guttata	33.67	2.00e-60	224.00
IUUC-Tru-118113	Takifugu rubripes	35.78	8.00e-77	278.00
IUUC-Tsy-119546	Tarsius syrichta	38.50	7.00e-64	236.00
IUUC-Tni-120562	Tetraodon nigroviridis	35.83	5.00e-77	279.00
IUUC-Tca-121431	Theobroma cacao	36.83	4.00e-81	293.00
IUUC-Tre-122165	Trichoderma reesei	68.80	3.00e-165	573.00
IUUC-Tvi-122282	Trichoderma virens	62.48	1.00e-175	607.00
IUUC-Tae-123805	Triticum aestivum	40.05	6.00e-70	256.00
IUUC-Tur-126252	Triticum urartu	37.91	4.00e-62	230.00
IUUC-Tme-127183	Tuber melanosporum	55.84	3.00e-145	506.00
IUUC-Tbe-128052	Tupaia belangeri	38.89	2.00e-56	211.00
IUUC-Ttr-129310	Tursiops truncatus	36.92	1.00e-57	215.00
IUUC-Uma-129566	Ustilago maydis	37.35	8.00e-90	322.00
IUUC-Vda-129705	Verticillium dahliae	63.10	2.00e-179	620.00
IUUC-Vpa-130511	Vicugna pacos	39.70	2.00e-54	204.00
IUUC-Vvi-131241	Vitis vinifera	41.54	8.00e-75	272.00
IUUC-Xtr-132170	Xenopus tropicalis	35.87	8.00e-74	269.00
IUUC-Xma-133266	Xiphophorus maculatus	37.77	4.00e-76	276.00
IUUC-Yli-134585	Yarrowia lipolytica	42.64	2.00e-97	347.00
IUUC-Zma-135830	Zea mays	36.86	1.00e-74	272.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence