iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d025911	Zm00001d025911_T004	Zm00001d025911_T004
Zm00001d025911	Zm00001d025911_T001	Zm00001d025911_T001
Zm00001d025911	Zm00001d025911_T002	Zm00001d025911_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-25	87.6	470	500

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H+d vtc++f   +d++++sGs D ++++W+
   Q: 470  HSDYVTCIQFnpvDDRYFISGSLDEKVRIWS 500
           9***********766***************9 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSAGGGEEVF YESRDGVLSS SCSSASDDDD DDSDHPRRRR RDGAASTAAA AALDVWTSEP 60
APVQERRRKL LQMLGLAGDP ALARLEMGRS VSYDDGPVPV RPAPASPPIS RSRSDGGAVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGTAAACCC CCGCCAACAA CGACGATGCA CGCAGCGGGG GAGAGGATGG GCTGCCTCGC 60
ATCACCACCA CCGCCCCAAT AACAACGACG ACGGCACCAG CGCCAACCAC CACTTTTCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

zma:103641868

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007814	Ashbya gossypii	29.80	2.00e-47	183.00
IUUC-Gma-043178	Glycine max	58.18	0.00e+00	650.00
IUUC-Mtr-058330	Medicago truncatula	52.71	0.00e+00	639.00
IUUC-Mac-064884	Musa acuminata	55.97	0.00e+00	714.00
IUUC-Ppe-101184	Prunus persica	59.94	2.00e-173	602.00
IUUC-Sce-106277	Saccharomyces cerevisiae	31.85	2.00e-46	180.00
IUUC-Stu-111949	Solanum tuberosum	56.89	4.00e-178	618.00
IUUC-Tca-121052	Theobroma cacao	56.57	9.00e-174	603.00
IUUC-Vvi-130908	Vitis vinifera	55.06	2.00e-169	589.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence