iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126781

Ensembl Protein ID

TRIUR3_23057-P1

UniProt Accession

M8ACH0; M8ACH0_TRIUA

Genbank Protein ID

EMS58264.1

Protein Name

Ribosome biogenesis protein BOP1 homolog

Genbank Nucleotide ID

KD135034

Gene Name

TRIUR3_23057

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_23057	TRIUR3_23057-T1	TRIUR3_23057-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-09	38.2	360	398

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++vt+l+   ++  ++sGs Dgti+vW++ tg++lk
   Q: 360  GHGGPVTSLSVeaTGQWIASGSSDGTIRVWEVETGRCLK 398
           8*********9976699********************97 PP

Organism

Triticum urartu

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGRADEEDKA ALSPGGDDAA DLSPDDSPWS DSAWSEDDDD EEASLSFEDS GEGSGSDADS 60
DGLEEEDDAA AEESDSSEDE VAPRNTVGDV PLKWYKDEEH IGYDISGRKI KKRDREGKID 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCCGCG CCGACGAAGA AGACAAGGCC GCCCTCTCCC CCGGCGGGGA CGACGCCGCC 60
GACCTCTCCC CCGACGACTC GCCGTGGAGC GACAGCGCCT GGTCCGAGGA CGACGACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	98.01	0.00e+00	1169.00
IUUC-Aml-001507	Ailuropoda melanoleuca	39.40	1.00e-109	389.00
IUUC-Atr-003141	Amborella trichopoda	61.76	5.00e-148	516.00
IUUC-Apl-003545	Anas platyrhynchos	42.17	4.00e-118	417.00
IUUC-Aly-005649	Arabidopsis lyrata	60.41	0.00e+00	729.00
IUUC-Ath-007625	Arabidopsis thaliana	59.59	0.00e+00	711.00
IUUC-Ago-007958	Ashbya gossypii	37.20	3.00e-114	405.00
IUUC-Acl-008344	Aspergillus clavatus	41.89	3.00e-65	242.00
IUUC-Afl-008616	Aspergillus flavus	37.36	1.00e-100	359.00
IUUC-Afu-009083	Aspergillus fumigatus	42.18	1.00e-61	230.00
IUUC-Ani-009365	Aspergillus nidulans	40.42	2.00e-68	253.00
IUUC-Ang-009796	Aspergillus niger	37.74	4.00e-99	354.00
IUUC-Aor-010015	Aspergillus oryzae	37.36	1.00e-100	359.00
IUUC-Ate-010537	Aspergillus terreus	37.80	4.00e-104	371.00
IUUC-Ame-011767	Astyanax mexicanus	47.47	5.00e-48	183.00
IUUC-Bgr-012286	Blumeria graminis	39.74	2.00e-114	405.00
IUUC-Bta-013569	Bos taurus	41.63	4.00e-123	434.00
IUUC-Bci-013820	Botrytis cinerea	38.65	1.00e-102	366.00
IUUC-Bdi-014895	Brachypodium distachyon	83.84	0.00e+00	989.00
IUUC-Bol-016099	Brassica oleracea	61.07	0.00e+00	744.00
IUUC-Bra-017174	Brassica rapa	60.97	0.00e+00	752.00
IUUC-Cel-018201	Caenorhabditis elegans	39.18	1.00e-108	385.00
IUUC-Cja-019009	Callithrix jacchus	39.12	2.00e-114	405.00
IUUC-Cfa-020173	Canis familiaris	38.58	2.00e-112	399.00
IUUC-Cpo-021796	Cavia porcellus	40.99	4.00e-123	434.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	46.22	6.00e-136	476.00
IUUC-Csa-023440	Chlorocebus sabaeus	41.48	1.00e-126	446.00
IUUC-Cin-025782	Ciona intestinalis	41.84	4.00e-127	447.00
IUUC-Csv-026352	Ciona savignyi	41.65	7.00e-129	453.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	36.03	8.00e-89	320.00
IUUC-Cne-027004	Cryptococcus neoformans	40.43	2.00e-126	445.00
IUUC-Cme-027242	Cyanidioschyzon merolae	32.18	9.00e-87	313.00
IUUC-Dre-028658	Danio rerio	43.90	5.00e-134	470.00
IUUC-Dno-028883	Dasypus novemcinctus	41.81	7.00e-126	443.00
IUUC-Dor-031031	Dipodomys ordii	40.40	1.00e-122	432.00
IUUC-Dse-031443	Dothistroma septosporum	36.01	7.00e-102	363.00
IUUC-Dme-031786	Drosophila melanogaster	39.01	4.00e-122	431.00
IUUC-Eca-033677	Equus caballus	41.63	3.00e-124	438.00
IUUC-Eeu-035310	Erinaceus europaeus	37.74	3.00e-97	347.00
IUUC-Fca-035888	Felis catus	40.73	4.00e-122	431.00
IUUC-Fal-037438	Ficedula albicollis	43.00	2.00e-106	378.00
IUUC-Fox-037973	Fusarium oxysporum	38.69	2.00e-117	416.00
IUUC-Fso-038187	Fusarium solani	38.36	1.00e-115	409.00
IUUC-Gmo-039114	Gadus morhua	39.08	9.00e-115	406.00
IUUC-Ggr-039746	Gaeumannomyces graminis	38.70	5.00e-118	417.00
IUUC-Gga-040631	Gallus gallus	43.17	1.00e-67	249.00
IUUC-Gac-042582	Gasterosteus aculeatus	40.84	5.00e-119	420.00
IUUC-Gma-044215	Glycine max	56.90	0.00e+00	709.00
IUUC-Ggo-045587	Gorilla gorilla	40.89	1.00e-126	446.00
IUUC-Hsa-046319	Homo sapiens	41.08	5.00e-127	447.00
IUUC-Hvu-047526	Hordeum vulgare	88.04	0.00e+00	1086.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	41.42	3.00e-124	438.00
IUUC-Kpa-049221	Komagataella pastoris	37.66	5.00e-110	391.00
IUUC-Lch-049640	Latimeria chalumnae	42.83	1.00e-136	479.00
IUUC-Lpe-051135	Leersia perrieri	83.48	0.00e+00	922.00
IUUC-Loc-051930	Lepisosteus oculatus	43.68	2.00e-137	481.00
IUUC-Lma-053290	Leptosphaeria maculans	40.11	3.00e-60	226.00
IUUC-Laf-053903	Loxodonta africana	45.13	2.00e-81	295.00
IUUC-Mcc-055471	Macaca mulatta	41.39	1.00e-125	442.00
IUUC-Meu-056190	Macropus eugenii	41.82	3.00e-124	438.00
IUUC-Mor-057135	Magnaporthe oryzae	38.24	1.00e-110	393.00
IUUC-Mpo-057475	Magnaporthe poae	37.89	7.00e-111	394.00
IUUC-Mtr-058689	Medicago truncatula	62.25	2.00e-137	482.00
IUUC-Mla-059149	Melampsora laricipopulina	39.67	1.00e-118	419.00
IUUC-Mga-059645	Meleagris gallopavo	38.19	4.00e-43	167.00
IUUC-Mvi-060485	Microbotryum violaceum	38.93	1.00e-108	387.00
IUUC-Mmr-061674	Microcebus murinus	40.83	2.00e-121	428.00
IUUC-Mdo-062973	Monodelphis domestica	41.35	2.00e-128	452.00
IUUC-Mmu-064180	Mus musculus	41.03	4.00e-124	437.00
IUUC-Mac-064535	Musa acuminata	72.52	5.00e-180	624.00
IUUC-Mpu-066406	Mustela putorius furo	42.38	2.00e-128	452.00
IUUC-Mlu-067795	Myotis lucifugus	41.43	5.00e-117	414.00
IUUC-Nfi-068516	Neosartorya fischeri	42.18	1.00e-55	210.00
IUUC-Ncr-068767	Neurospora crassa	37.62	3.00e-101	362.00
IUUC-Opr-071084	Ochotona princeps	44.29	1.00e-60	225.00
IUUC-Ont-071614	Oreochromis niloticus	39.77	8.00e-129	453.00
IUUC-Oba-075980	Oryza barthii	83.50	0.00e+00	925.00
IUUC-Obr-076799	Oryza brachyantha	77.31	0.00e+00	957.00
IUUC-Ogl-077134	Oryza glaberrima	78.41	0.00e+00	923.00
IUUC-Ogu-078655	Oryza glumaepatula	80.69	0.00e+00	919.00
IUUC-Oin-079654	Oryza indica	78.92	0.00e+00	919.00
IUUC-Olo-080706	Oryza longistaminata	83.67	0.00e+00	931.00
IUUC-Ome-081716	Oryza meridionalis	77.17	0.00e+00	857.00
IUUC-Oni-082508	Oryza nivara	75.60	0.00e+00	872.00
IUUC-Opu-083707	Oryza punctata	83.66	0.00e+00	921.00
IUUC-Oru-084453	Oryza rufipogon	83.67	0.00e+00	931.00
IUUC-Osa-085811	Oryza sativa	78.41	0.00e+00	924.00
IUUC-Ola-087361	Oryzias latipes	43.17	1.00e-132	466.00
IUUC-Oga-088015	Otolemur garnettii	41.23	8.00e-128	450.00
IUUC-Oar-090058	Ovis aries	38.87	6.00e-59	221.00
IUUC-Ptr-090631	Pan troglodytes	42.15	7.00e-56	209.00
IUUC-Pan-092306	Papio anubis	41.57	9.00e-126	443.00
IUUC-Pma-094622	Petromyzon marinus	42.28	6.00e-133	466.00
IUUC-Pno-094794	Phaeosphaeria nodorum	34.54	1.00e-91	330.00
IUUC-Ppa-095528	Physcomitrella patens	55.26	4.00e-142	497.00
IUUC-Pfo-096682	Poecilia formosa	42.33	3.00e-132	464.00
IUUC-Pab-097939	Pongo abelii	40.11	1.00e-111	396.00
IUUC-Pop-099043	Populus trichocarpa	64.52	0.00e+00	692.00
IUUC-Pca-100333	Procavia capensis	41.43	1.00e-125	442.00
IUUC-Ppe-102078	Prunus persica	58.70	0.00e+00	689.00
IUUC-Pgr-103525	Puccinia graminis	38.98	1.00e-110	393.00
IUUC-Ptt-103929	Puccinia triticina	38.57	3.00e-110	392.00
IUUC-Pte-104029	Pyrenophora teres	37.68	1.00e-110	393.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	37.68	4.00e-110	391.00
IUUC-Rno-105248	Rattus norvegicus	41.49	2.00e-125	442.00
IUUC-Sce-106381	Saccharomyces cerevisiae	41.18	6.00e-74	271.00
IUUC-Sha-106519	Sarcophilus harrisii	43.05	6.00e-131	460.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	38.81	2.00e-108	385.00
IUUC-Spo-108071	Schizosaccharomyces pombe	36.97	1.00e-106	379.00
IUUC-Smo-109604	Selaginella moellendorffii	55.61	0.00e+00	650.00
IUUC-Sit-110551	Setaria italica	78.96	0.00e+00	934.00
IUUC-Sly-110970	Solanum lycopersicum	72.62	9.00e-150	522.00
IUUC-Stu-112593	Solanum tuberosum	60.96	0.00e+00	773.00
IUUC-Sar-113123	Sorex araneus	35.33	8.00e-41	159.00
IUUC-Sbi-113945	Sorghum bicolor	78.69	0.00e+00	940.00
IUUC-Sre-115188	Sporisorium reilianum	42.66	2.00e-76	279.00
IUUC-Ssc-115352	Sus scrofa	41.90	7.00e-128	450.00
IUUC-Tru-117685	Takifugu rubripes	43.10	8.00e-132	463.00
IUUC-Tni-119982	Tetraodon nigroviridis	42.47	7.00e-132	463.00
IUUC-Tca-121664	Theobroma cacao	62.34	0.00e+00	758.00
IUUC-Tre-122229	Trichoderma reesei	38.90	3.00e-101	362.00
IUUC-Tvi-122576	Trichoderma virens	39.12	1.00e-103	369.00
IUUC-Tae-125703	Triticum aestivum	92.10	0.00e+00	1050.00
IUUC-Tme-127080	Tuber melanosporum	40.80	1.00e-126	446.00
IUUC-Ttr-128514	Tursiops truncatus	44.13	2.00e-86	312.00
IUUC-Uma-129556	Ustilago maydis	42.38	2.00e-73	269.00
IUUC-Vda-129715	Verticillium dahliae	40.40	6.00e-112	397.00
IUUC-Vvi-131211	Vitis vinifera	62.71	0.00e+00	780.00
IUUC-Xma-133883	Xiphophorus maculatus	41.15	2.00e-128	452.00
IUUC-Yli-134438	Yarrowia lipolytica	38.39	9.00e-106	377.00
IUUC-Zma-135341	Zea mays	80.39	0.00e+00	662.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence