iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057631

Ensembl Protein ID

KEH32299

UniProt Accession

A0A072UR51; A0A072UR51_MEDTR

Genbank Protein ID

KEH32299.1

Protein Name

RING-H2 zinc finger protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g120270

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g120270	KEH32299	KEH32299

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-09	39.1	104	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f+dg   +vlp C+H fh dC+ +w       + + +CPlCr
   Q: 104  CAVCLSEFEDGetGRVLPkCNHSFHIDCIDMW------FQSHSTCPLCR 146
           ********77666777888*************......9999******8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MNSNMDNERE IENNYALSGK IMLTAIIILF AVIIIMLCLH FLIRYYLLRD RTRQHLRRQP 60
FIFYVDPSAP ASLTLAVSRG LDASVISSLP VFNFSSNTDQ AVECAVCLSE FEDGETGRVL 120

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Nucleotide Sequence
(Fasta)

ATGAATTCGA ACATGGATAA TGAAAGAGAA ATCGAAAACA ATTATGCCCT CAGCGGCAAG 60
ATAATGCTAA CCGCCATTAT CATTCTCTTC GCCGTTATCA TAATAATGCT CTGTCTCCAT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g120270

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000701	Aegilops tauschii	44.58	4.00e-13	67.00
IUUC-Ath-006860	Arabidopsis thaliana	45.55	4.00e-40	157.00
IUUC-Ago-007829	Ashbya gossypii	38.89	2.00e-08	52.80
IUUC-Bra-016806	Brassica rapa	47.17	7.00e-37	146.00
IUUC-Gma-044002	Glycine max	51.14	5.00e-52	196.00
IUUC-Obr-076402	Oryza brachyantha	49.43	1.00e-14	71.60
IUUC-Tca-121512	Theobroma cacao	47.78	5.00e-46	177.00
IUUC-Tae-123261	Triticum aestivum	66.67	4.00e-14	70.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence