iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__1328__AT5G20620.1	fgenesh2_kg.4__1328__AT5G20620.1	fgenesh2_kg.4__1328__AT5G20620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	1.20e-206	670.2	305	380
ULD/UDP/UBQ/UBQ_PIM	6.40e-141	459.3	305	377

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 305  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 305  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 377
           99********************************************************************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID NVKAKIQDKE GIPPDQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAC TTAGATCATA AAAAAAAAAA AAACATATAG ATCTTCAAAT TATTTAATTA 60
TCTTAAAATT AGGTCCTTTT TACCTACAAT TAGGTTTAAA ATTTTGGAAC TAAACCAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

aly:ARALYDRAFT_482268

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007492	Arabidopsis thaliana	100.00	0.00e+00	756.00
IUUC-Ago-007937	Ashbya gossypii	96.86	0.00e+00	741.00
IUUC-Bta-012771	Bos taurus	95.74	3.00e-168	583.00
IUUC-Cja-019812	Callithrix jacchus	96.05	0.00e+00	728.00
IUUC-Lpe-050731	Leersia perrieri	35.06	3.00e-43	168.00
IUUC-Ogl-077274	Oryza glaberrima	94.47	0.00e+00	697.00
IUUC-Oni-082299	Oryza nivara	34.10	4.00e-41	161.00
IUUC-Spo-108219	Schizosaccharomyces pombe	97.12	0.00e+00	741.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence