iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006524

Ensembl Protein ID

fgenesh2_kg.3__889__AT3G08850.1

UniProt Accession

D7L783; D7L783_ARALL

Genbank Protein ID

EFH60959.1

Protein Name

RAPTOR1B

Genbank Nucleotide ID

GL348715

Gene Name

RAPTOR1B; ARALYDRAFT_478188

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__889__AT3G08850.1	fgenesh2_kg.3__889__AT3G08850.1	fgenesh2_kg.3__889__AT3G08850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-13	49.7	1260	1290

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H +s t+la     ++++sGs    ikv++l
   Q: 1260 HRGSLTALAVhRHaPIIASGSAKQLIKVFSL 1290
           999999999996679*************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT 60
ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIALVPKWRL KERMKTGCVA LVLCLNITVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCTTTGAC AAAATCCCAA ATTTCGCATC CTCACTTTCT CCTTTGCCTT TTCTCTCTTC 60
TGCCGCCACC ATCACCACTG TTAATTCGCC GCCGCTTCCA CATCAATCGC CGTCGTAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR029030--Caspase-like_dom
IPR004083--Raptor
IPR029347--Raptor_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF14538--Raptor_N
PF00400--WD40

SMART

SM01302--Raptor_N
SM00320--WD40

Gene Ontology

GO:0031931--C:TORC1 complex
GO:0016049--P:cell growth
GO:0009793--P:embryo development ending in seed dormancy
GO:0031929--P:TOR signaling

KEGG

aly:ARALYDRAFT_478188

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000354	Aegilops tauschii	62.72	0.00e+00	1529.00
IUUC-Aml-001499	Ailuropoda melanoleuca	57.42	0.00e+00	775.00
IUUC-Atr-002704	Amborella trichopoda	69.57	0.00e+00	1528.00
IUUC-Apl-003540	Anas platyrhynchos	57.42	0.00e+00	776.00
IUUC-Aca-004449	Anolis carolinensis	54.25	0.00e+00	641.00
IUUC-Ath-007242	Arabidopsis thaliana	99.03	0.00e+00	2505.00
IUUC-Ago-007709	Ashbya gossypii	49.58	4.00e-99	356.00
IUUC-Acl-008215	Aspergillus clavatus	49.62	0.00e+00	631.00
IUUC-Afl-008401	Aspergillus flavus	49.70	0.00e+00	633.00
IUUC-Afu-008797	Aspergillus fumigatus	48.62	0.00e+00	632.00
IUUC-Ani-009268	Aspergillus nidulans	49.01	2.00e-180	625.00
IUUC-Ang-009608	Aspergillus niger	49.62	0.00e+00	628.00
IUUC-Aor-009894	Aspergillus oryzae	49.70	0.00e+00	633.00
IUUC-Ate-010357	Aspergillus terreus	48.94	2.00e-180	625.00
IUUC-Ame-011186	Astyanax mexicanus	56.96	0.00e+00	697.00
IUUC-Bgr-012085	Blumeria graminis	48.09	1.00e-168	587.00
IUUC-Bta-013422	Bos taurus	57.42	0.00e+00	776.00
IUUC-Bci-013736	Botrytis cinerea	47.18	8.00e-177	614.00
IUUC-Bdi-015042	Brachypodium distachyon	67.72	0.00e+00	1633.00
IUUC-Bol-016048	Brassica oleracea	94.05	0.00e+00	2467.00
IUUC-Bra-016961	Brassica rapa	94.12	0.00e+00	2501.00
IUUC-Cel-018321	Caenorhabditis elegans	43.80	9.00e-90	325.00
IUUC-Cja-018939	Callithrix jacchus	57.58	0.00e+00	776.00
IUUC-Cfa-020898	Canis familiaris	57.42	0.00e+00	776.00
IUUC-Cpo-021514	Cavia porcellus	57.58	0.00e+00	774.00
IUUC-Cre-022818	Chlamydomonas reinhardtii	64.71	7.00e-111	392.00
IUUC-Csa-023314	Chlorocebus sabaeus	57.58	0.00e+00	776.00
IUUC-Cin-025701	Ciona intestinalis	57.61	0.00e+00	739.00
IUUC-Csv-026362	Ciona savignyi	56.74	0.00e+00	718.00
IUUC-Cgl-026561	Colletotrichum gloeosporioides	50.30	9.00e-172	597.00
IUUC-Cne-027009	Cryptococcus neoformans	42.45	3.00e-166	578.00
IUUC-Cme-027253	Cyanidioschyzon merolae	64.85	7.00e-68	252.00
IUUC-Dre-028485	Danio rerio	57.58	0.00e+00	776.00
IUUC-Dno-029901	Dasypus novemcinctus	55.71	0.00e+00	661.00
IUUC-Dor-030140	Dipodomys ordii	51.47	9.00e-177	613.00
IUUC-Dse-031462	Dothistroma septosporum	44.31	9.00e-163	567.00
IUUC-Dme-031670	Drosophila melanogaster	55.25	0.00e+00	685.00
IUUC-Ete-032578	Echinops telfairi	70.00	1.00e-64	241.00
IUUC-Eca-034076	Equus caballus	57.27	0.00e+00	773.00
IUUC-Eeu-035140	Erinaceus europaeus	54.97	0.00e+00	681.00
IUUC-Fca-035651	Felis catus	57.42	0.00e+00	775.00
IUUC-Fal-037244	Ficedula albicollis	57.27	0.00e+00	772.00
IUUC-Fox-037742	Fusarium oxysporum	49.39	9.00e-172	597.00
IUUC-Fso-038369	Fusarium solani	49.75	9.00e-163	567.00
IUUC-Gmo-039007	Gadus morhua	54.77	8.00e-134	471.00
IUUC-Ggr-039836	Gaeumannomyces graminis	43.87	1.00e-168	587.00
IUUC-Gga-041121	Gallus gallus	57.42	0.00e+00	776.00
IUUC-Gac-041430	Gasterosteus aculeatus	58.18	0.00e+00	779.00
IUUC-Gma-043160	Glycine max	74.31	0.00e+00	1932.00
IUUC-Ggo-044934	Gorilla gorilla	57.78	0.00e+00	760.00
IUUC-Hsa-045887	Homo sapiens	57.58	0.00e+00	777.00
IUUC-Hvu-047823	Hordeum vulgare	67.29	0.00e+00	1450.00
IUUC-Itr-048274	Ictidomys tridecemlineatus	51.06	6.00e-76	277.00
IUUC-Kpa-049399	Komagataella pastoris	43.31	2.00e-171	595.00
IUUC-Lch-050405	Latimeria chalumnae	57.58	0.00e+00	775.00
IUUC-Lpe-050864	Leersia perrieri	81.28	0.00e+00	704.00
IUUC-Loc-051868	Lepisosteus oculatus	53.06	0.00e+00	734.00
IUUC-Lma-052993	Leptosphaeria maculans	49.39	0.00e+00	635.00
IUUC-Laf-053339	Loxodonta africana	57.73	0.00e+00	775.00
IUUC-Mcc-055591	Macaca mulatta	57.58	0.00e+00	776.00
IUUC-Meu-056642	Macropus eugenii	57.87	2.00e-170	593.00
IUUC-Mor-057204	Magnaporthe oryzae	45.69	4.00e-169	588.00
IUUC-Mpo-057532	Magnaporthe poae	46.43	3.00e-167	582.00
IUUC-Mtr-058553	Medicago truncatula	73.19	0.00e+00	1938.00
IUUC-Mla-058907	Melampsora laricipopulina	39.05	6.00e-129	455.00
IUUC-Mga-059256	Meleagris gallopavo	57.42	0.00e+00	777.00
IUUC-Mvi-060457	Microbotryum violaceum	41.40	6.00e-165	574.00
IUUC-Mmr-060874	Microcebus murinus	61.31	0.00e+00	741.00
IUUC-Mdo-062436	Monodelphis domestica	57.42	0.00e+00	773.00
IUUC-Mmu-063264	Mus musculus	57.73	0.00e+00	777.00
IUUC-Mac-065524	Musa acuminata	69.15	0.00e+00	1741.00
IUUC-Mpu-065899	Mustela putorius furo	56.46	0.00e+00	700.00
IUUC-Mlu-067344	Myotis lucifugus	56.87	4.00e-152	531.00
IUUC-Nfi-068615	Neosartorya fischeri	49.77	0.00e+00	631.00
IUUC-Ncr-068744	Neurospora crassa	48.26	3.00e-165	576.00
IUUC-Nle-069014	Nomascus leucogenys	57.58	0.00e+00	775.00
IUUC-Opr-070548	Ochotona princeps	59.13	7.00e-107	381.00
IUUC-Ont-072485	Oreochromis niloticus	57.88	0.00e+00	776.00
IUUC-Oan-073253	Ornithorhynchus anatinus	30.42	9.00e-29	120.00
IUUC-Ocu-074290	Oryctolagus cuniculus	23.10	9.00e-12	64.30
IUUC-Oba-075130	Oryza barthii	65.11	0.00e+00	1543.00
IUUC-Obr-076161	Oryza brachyantha	65.62	0.00e+00	1666.00
IUUC-Ogl-077800	Oryza glaberrima	65.92	0.00e+00	1568.00
IUUC-Ogu-078292	Oryza glumaepatula	84.03	9.00e-59	219.00
IUUC-Oin-079895	Oryza indica	63.19	0.00e+00	1404.00
IUUC-Olo-080598	Oryza longistaminata	55.79	3.00e-145	507.00
IUUC-Ome-081293	Oryza meridionalis	65.45	0.00e+00	1291.00
IUUC-Oni-082236	Oryza nivara	78.24	1.00e-108	387.00
IUUC-Opu-083423	Oryza punctata	68.06	0.00e+00	1649.00
IUUC-Oru-085086	Oryza rufipogon	60.00	0.00e+00	1372.00
IUUC-Osa-086012	Oryza sativa	67.73	0.00e+00	1580.00
IUUC-Ola-086662	Oryzias latipes	53.26	9.00e-163	567.00
IUUC-Olu-087760	Ostreococcus lucimarinus	44.76	0.00e+00	994.00
IUUC-Oga-088053	Otolemur garnettii	56.96	0.00e+00	704.00
IUUC-Oar-089466	Ovis aries	53.58	0.00e+00	756.00
IUUC-Pan-092259	Papio anubis	57.58	0.00e+00	776.00
IUUC-Psi-093641	Pelodiscus sinensis	54.40	0.00e+00	667.00
IUUC-Pno-094789	Phaeosphaeria nodorum	47.78	6.00e-175	607.00
IUUC-Pfo-096837	Poecilia formosa	57.88	0.00e+00	777.00
IUUC-Pab-097545	Pongo abelii	51.79	2.00e-76	279.00
IUUC-Pop-099209	Populus trichocarpa	76.54	0.00e+00	1964.00
IUUC-Pca-100579	Procavia capensis	41.18	5.00e-57	215.00
IUUC-Ppe-101494	Prunus persica	79.22	0.00e+00	2016.00
IUUC-Pva-103245	Pteropus vampyrus	51.07	3.00e-131	462.00
IUUC-Pgr-103460	Puccinia graminis	43.94	6.00e-44	172.00
IUUC-Ptt-103797	Puccinia triticina	32.91	9.00e-57	215.00
IUUC-Pte-104367	Pyrenophora teres	48.94	0.00e+00	629.00
IUUC-Pyt-104771	Pyrenophora triticirepentis	52.50	1.00e-171	597.00
IUUC-Rno-104965	Rattus norvegicus	57.73	0.00e+00	777.00
IUUC-Sce-106156	Saccharomyces cerevisiae	46.59	3.00e-96	346.00
IUUC-Sha-106474	Sarcophilus harrisii	57.80	1.00e-135	477.00
IUUC-Sja-107888	Schizosaccharomyces japonicus	51.67	0.00e+00	644.00
IUUC-Spo-108057	Schizosaccharomyces pombe	51.67	0.00e+00	630.00
IUUC-Ssl-108423	Sclerotinia sclerotiorum	45.97	2.00e-175	609.00
IUUC-Smo-109363	Selaginella moellendorffii	55.52	0.00e+00	1337.00
IUUC-Sit-109752	Setaria italica	67.95	0.00e+00	1671.00
IUUC-Sly-110910	Solanum lycopersicum	73.72	0.00e+00	1930.00
IUUC-Stu-112814	Solanum tuberosum	73.68	0.00e+00	1917.00
IUUC-Sbi-113810	Sorghum bicolor	66.18	0.00e+00	1595.00
IUUC-Sre-115168	Sporisorium reilianum	40.48	1.00e-165	577.00
IUUC-Ssc-115398	Sus scrofa	56.42	1.00e-131	463.00
IUUC-Tgu-117361	Taeniopygia guttata	57.42	0.00e+00	775.00
IUUC-Tsy-119587	Tarsius syrichta	61.44	0.00e+00	721.00
IUUC-Tni-119757	Tetraodon nigroviridis	57.88	0.00e+00	771.00
IUUC-Tca-121570	Theobroma cacao	76.62	0.00e+00	1866.00
IUUC-Tre-122024	Trichoderma reesei	51.89	4.00e-165	575.00
IUUC-Tvi-122502	Trichoderma virens	52.23	3.00e-166	578.00
IUUC-Tae-125799	Triticum aestivum	67.72	0.00e+00	1681.00
IUUC-Tme-127001	Tuber melanosporum	50.32	1.00e-131	463.00
IUUC-Ttr-129128	Tursiops truncatus	56.03	0.00e+00	654.00
IUUC-Uma-129588	Ustilago maydis	40.73	2.00e-165	576.00
IUUC-Vda-129990	Verticillium dahliae	49.51	2.00e-155	543.00
IUUC-Vvi-131611	Vitis vinifera	75.69	0.00e+00	1972.00
IUUC-Xtr-132727	Xenopus tropicalis	57.12	0.00e+00	775.00
IUUC-Xma-133492	Xiphophorus maculatus	58.33	0.00e+00	779.00
IUUC-Yli-134358	Yarrowia lipolytica	45.42	1.00e-169	590.00
IUUC-Zma-135723	Zea mays	63.37	0.00e+00	1498.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence