iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109326

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377567

Gene Name

SELMODRAFT_78344

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_78344	EFJ36193	EFJ36193

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-25	88.7	297	334
UBD/Beta-Prp	2.30e-45	155.7	246	413

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v+ ++f +d   ++s s+D +ik+WD+ tg+++
   Q: 297  GHSATVRHVSFsNDgLKFLSVSYDTKIKLWDTETGKVI 334
           8**********999788*****************9976 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdlet.gqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
            c+ht+ gh+ +v++++f+p +g+ l+sGs+d  +++wd+++ ++c++ t +gh+++v++v+++ dg  + s s+D++++lWd +tgk++  +t g+t++v
   Q: 246  RCIHTWVGHKGNVMTIQFFPkYGHLLLSGSSDHQVKIWDVHNhRKCVR-TYKGHSATVRHVSFSNDGLKFLSVSYDTKIKLWDTETGKVISSFTTGKTPYV 345
           6*******************999****************987256666.********************************************999***** PP
   S: 184  yslsfdsngkelvsgs.ldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
            +l  d++++ ++ ++ +d++v  wd+ +g++ +++  h d v+ + f +n+ r+++ s+D+s+r+W 
   Q: 346  AKLHPDDDKQNVLMVAmKDKKVVQWDVDSGKITQEYDQHLDAVNTITFVDNNRRFITSSDDRSLRVWE 413
           ****999987777665279************************************************5 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MEVSFNVGRC SAPDVPVAHG GAAAAESALA VVDPLQKRVT FNPRYEQMWA PMEGPIHPYN 60
KDGLSRGMKN HALGVVEDSS ISPFTFDEQY HTFQAFGYAA DTSAPNGANL IGDPDKIKDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGTGA GCTTCAATGT GGGGCGCTGC AGCGCGCCGG ACGTTCCCGT GGCGCACGGT 60
GGCGCCGCGG CGGCGGAGTC GGCGCTGGCG GTGGTGGATC CTCTCCAGAA GCGAGTGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

smo:SELMODRAFT_78344

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	59.81	0.00e+00	630.00
IUUC-Atr-002502	Amborella trichopoda	62.52	0.00e+00	679.00
IUUC-Aca-004854	Anolis carolinensis	33.52	9.00e-71	260.00
IUUC-Aly-006158	Arabidopsis lyrata	60.83	0.00e+00	652.00
IUUC-Ath-007474	Arabidopsis thaliana	60.45	0.00e+00	649.00
IUUC-Ago-007726	Ashbya gossypii	36.42	1.00e-64	239.00
IUUC-Ang-009851	Aspergillus niger	38.39	2.00e-106	379.00
IUUC-Bta-012568	Bos taurus	45.59	3.00e-128	451.00
IUUC-Bdi-014199	Brachypodium distachyon	59.89	0.00e+00	630.00
IUUC-Bol-015695	Brassica oleracea	59.66	0.00e+00	663.00
IUUC-Bra-017923	Brassica rapa	60.76	0.00e+00	672.00
IUUC-Cfa-020559	Canis familiaris	45.59	8.00e-128	450.00
IUUC-Cpo-022356	Cavia porcellus	45.78	2.00e-128	452.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	42.90	7.00e-73	266.00
IUUC-Csa-023125	Chlorocebus sabaeus	45.78	2.00e-128	452.00
IUUC-Fca-035727	Felis catus	45.59	4.00e-128	451.00
IUUC-Gmo-039670	Gadus morhua	44.57	6.00e-132	463.00
IUUC-Gac-042159	Gasterosteus aculeatus	44.78	5.00e-130	457.00
IUUC-Gma-044299	Glycine max	62.22	0.00e+00	639.00
IUUC-Hvu-047431	Hordeum vulgare	29.01	6.00e-36	143.00
IUUC-Lch-049796	Latimeria chalumnae	38.66	3.00e-102	365.00
IUUC-Lpe-051153	Leersia perrieri	59.20	0.00e+00	625.00
IUUC-Mac-065109	Musa acuminata	58.02	5.00e-180	623.00
IUUC-Mpu-066659	Mustela putorius furo	45.59	4.00e-128	451.00
IUUC-Mlu-067029	Myotis lucifugus	45.68	4.00e-128	451.00
IUUC-Ont-071680	Oreochromis niloticus	44.96	2.00e-130	458.00
IUUC-Ocu-074074	Oryctolagus cuniculus	45.61	5.00e-130	457.00
IUUC-Oba-075625	Oryza barthii	58.76	3.00e-180	624.00
IUUC-Obr-076510	Oryza brachyantha	58.00	2.00e-179	621.00
IUUC-Ogl-077275	Oryza glaberrima	58.76	3.00e-180	624.00
IUUC-Ogu-078563	Oryza glumaepatula	58.76	3.00e-180	624.00
IUUC-Oin-079898	Oryza indica	64.04	3.00e-154	537.00
IUUC-Olo-081080	Oryza longistaminata	58.35	8.00e-169	585.00
IUUC-Ome-081794	Oryza meridionalis	29.41	3.00e-26	112.00
IUUC-Oni-083121	Oryza nivara	58.76	4.00e-180	623.00
IUUC-Opu-083329	Oryza punctata	58.68	8.00e-180	622.00
IUUC-Oru-084807	Oryza rufipogon	59.20	1.00e-158	551.00
IUUC-Osa-086039	Oryza sativa	58.83	1.00e-180	625.00
IUUC-Ola-087149	Oryzias latipes	46.36	2.00e-132	464.00
IUUC-Oga-088359	Otolemur garnettii	45.78	1.00e-128	452.00
IUUC-Psi-093527	Pelodiscus sinensis	45.68	2.00e-117	415.00
IUUC-Pno-094771	Phaeosphaeria nodorum	46.02	6.00e-94	337.00
IUUC-Ppa-095386	Physcomitrella patens	60.71	0.00e+00	694.00
IUUC-Pop-099962	Populus trichocarpa	63.02	0.00e+00	690.00
IUUC-Pca-100876	Procavia capensis	44.50	3.00e-90	325.00
IUUC-Ppe-101777	Prunus persica	61.84	0.00e+00	646.00
IUUC-Pgr-103456	Puccinia graminis	41.59	4.00e-118	417.00
IUUC-Ptt-103731	Puccinia triticina	41.48	3.00e-111	395.00
IUUC-Sha-106709	Sarcophilus harrisii	45.59	5.00e-129	454.00
IUUC-Spo-108331	Schizosaccharomyces pombe	37.00	5.00e-92	330.00
IUUC-Sit-110446	Setaria italica	58.71	5.00e-176	610.00
IUUC-Sly-111330	Solanum lycopersicum	61.84	0.00e+00	650.00
IUUC-Stu-112610	Solanum tuberosum	61.35	0.00e+00	651.00
IUUC-Sbi-114005	Sorghum bicolor	59.47	2.00e-174	605.00
IUUC-Sre-114988	Sporisorium reilianum	41.61	9.00e-119	419.00
IUUC-Tca-121429	Theobroma cacao	61.94	0.00e+00	657.00
IUUC-Tae-125557	Triticum aestivum	59.89	0.00e+00	629.00
IUUC-Tur-126554	Triticum urartu	59.73	7.00e-180	622.00
IUUC-Tme-126919	Tuber melanosporum	40.11	2.00e-107	382.00
IUUC-Ttr-129215	Tursiops truncatus	45.40	5.00e-126	444.00
IUUC-Uma-129622	Ustilago maydis	40.97	8.00e-116	410.00
IUUC-Vda-129750	Verticillium dahliae	46.30	8.00e-95	340.00
IUUC-Xtr-131865	Xenopus tropicalis	45.54	7.00e-129	453.00
IUUC-Xma-133627	Xiphophorus maculatus	45.81	2.00e-130	458.00
IUUC-Zma-135925	Zea mays	59.28	4.00e-173	600.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence