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Tag Content
UUCD2 ID IUUC-Cfa-020471
UUCD1 version UUC-CaF-00466
Ensembl Protein ID ENSCAFP00000018450.3
UniProt Accession E2RNA4; E2RNA4_CANLF
Genbank Protein ID ENSCAFP00000018450
Protein Name Ribosome biogenesis protein WDR12; WD repeat-containing protein 12
Genbank Nucleotide ID AAEX03018031
Gene Name WDR12
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCAFG00000012519.3 ENSCAFT00000019894.3 ENSCAFP00000018450.3
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.90e-43 144.8 341 376
UBD/Beta-Prp 3.70e-47 161.3 246 412
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           Ht++vt+l++  +    l+sGs D+ +k+WD+r+++
   Q: 341  HTGWVTSLKWspTHeQQLISGSLDNIVKLWDTRSCK 376
           **********9533678**************99876 PP
   

   UBD/Beta-Prp
   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktg 169
           t+++++tl+gh++ + s+ +s   + + s+s+d tirvwd+e+g+  + tl+g++ v nc++++p ++ l+sGs+Dr +rlWd   k g
   Q: 246  TRTPIVTLSGHKEAISSVLWSD-AEEICSASWDHTIRVWDVESGSLKS-TLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPrtKDG 331
           67899****************9.99**********************9.***987.99**************************54456 PP
   S: 170  kllrtl.tgghtdsvyslsfdsng.kelvsgsldgtvklwdlq.tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +l+    t+ ht+ v+sl+++++  ++l+sgsld+ vklwd +  +  ++ l +h+d v+sv+ + ++ +l+sg++D+ ++ +
   Q: 332  SLVSLSlTS-HTGWVTSLKWSPTHeQQLISGSLDNIVKLWDTRsCKAPLYDLAAHEDKVLSVDWT-DTGLLLSGGADNKLYSY 412
           666644366.************9889*****************54566****************9.999********998765 PP
   
Organism Canis familiaris
Functional Description
(View)

Functional Description


     Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
 Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
Protein Sequence
(Fasta)
MAQLQTRFFT DNKKYVVDDV PFSIPAASEI ADLSNIINKL LEAKNEFHKH VEFDFLIKGQ 60
FLRLPLLKHM ELENISSEEV VELEYVEKYT APQPEQCLFH DDWISSVRGA EEWILTGSYD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cfa-020471|E3,WD_repeat;UBD,Beta-Prp|Canis familiaris
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCCCAGC TCCAGACACG CTTCTTCACT GACAACAAGA AGTAAGCACC CTTTGCCTCT 60
CCTCTTCGCC TCCCTAGGAT CCTTTCCAAG AGCTCCTTCC GTATGACTTT GTGAAGCCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cfa-020471|E3,WD_repeat;UBD,Beta-Prp|Canis familiaris
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR028599--WDR12/Ytm1
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08154--NLE
PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0008283--P:cell proliferation
GO:0000460--P:maturation of 5.8S rRNA
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000470--P:maturation of LSU-rRNA
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0007219--P:Notch signaling pathway
KEGG cfa:478876
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000532 Aegilops tauschii 33.25 1.00e-55 210.00
IUUC-Aml-001997 Ailuropoda melanoleuca 97.07 0.00e+00 751.00
IUUC-Atr-002544 Amborella trichopoda 33.10 2.00e-55 209.00
IUUC-Apl-003981 Anas platyrhynchos 85.90 0.00e+00 642.00
IUUC-Aca-004370 Anolis carolinensis 83.29 0.00e+00 699.00
IUUC-Aly-006455 Arabidopsis lyrata 34.48 1.00e-56 214.00
IUUC-Ath-006669 Arabidopsis thaliana 33.17 6.00e-52 198.00
IUUC-Ago-007864 Ashbya gossypii 29.55 1.00e-36 147.00
IUUC-Acl-008177 Aspergillus clavatus 28.90 8.00e-35 141.00
IUUC-Afl-008617 Aspergillus flavus 28.97 1.00e-34 141.00
IUUC-Afu-008752 Aspergillus fumigatus 28.21 4.00e-31 129.00
IUUC-Ani-009136 Aspergillus nidulans 29.16 8.00e-34 138.00
IUUC-Ang-009701 Aspergillus niger 28.24 2.00e-32 133.00
IUUC-Aor-009884 Aspergillus oryzae 29.23 2.00e-34 140.00
IUUC-Ame-011432 Astyanax mexicanus 77.07 0.00e+00 657.00
IUUC-Bgr-012218 Blumeria graminis 28.34 2.00e-30 126.00
IUUC-Bta-012829 Bos taurus 95.74 0.00e+00 773.00
IUUC-Bci-013953 Botrytis cinerea 30.49 3.00e-34 139.00
IUUC-Bdi-014351 Brachypodium distachyon 35.78 5.00e-55 208.00
IUUC-Bol-016190 Brassica oleracea 34.03 4.00e-53 202.00
IUUC-Bra-017876 Brassica rapa 33.91 1.00e-54 207.00
IUUC-Cel-018569 Caenorhabditis elegans 32.28 1.00e-48 187.00
IUUC-Cja-019468 Callithrix jacchus 94.80 0.00e+00 750.00
IUUC-Cpo-022260 Cavia porcellus 95.51 0.00e+00 756.00
IUUC-Cre-022614 Chlamydomonas reinhardtii 30.46 2.00e-37 149.00
IUUC-Csa-023989 Chlorocebus sabaeus 94.80 0.00e+00 753.00
IUUC-Cho-024426 Choloepus hoffmanni 91.75 4.00e-159 553.00
IUUC-Cin-025789 Ciona intestinalis 42.69 3.00e-96 345.00
IUUC-Cne-027063 Cryptococcus neoformans 24.13 3.00e-20 92.80
IUUC-Dre-027907 Danio rerio 78.25 0.00e+00 673.00
IUUC-Dno-029225 Dasypus novemcinctus 94.33 0.00e+00 763.00
IUUC-Dor-031082 Dipodomys ordii 77.78 1.00e-167 582.00
IUUC-Dse-031308 Dothistroma septosporum 27.53 2.00e-35 143.00
IUUC-Dme-032189 Drosophila melanogaster 41.26 1.00e-91 330.00
IUUC-Ete-032247 Echinops telfairi 87.23 0.00e+00 701.00
IUUC-Eca-034285 Equus caballus 96.45 0.00e+00 776.00
IUUC-Eeu-035322 Erinaceus europaeus 84.92 0.00e+00 644.00
IUUC-Fca-036114 Felis catus 97.64 0.00e+00 780.00
IUUC-Fal-036891 Ficedula albicollis 85.88 1.00e-173 602.00
IUUC-Fox-037965 Fusarium oxysporum 25.59 1.00e-33 137.00
IUUC-Fso-038244 Fusarium solani 26.90 7.00e-33 135.00
IUUC-Gmo-039040 Gadus morhua 75.41 0.00e+00 672.00
IUUC-Gga-040610 Gallus gallus 83.45 0.00e+00 709.00
IUUC-Gac-042117 Gasterosteus aculeatus 75.41 0.00e+00 657.00
IUUC-Gma-043146 Glycine max 36.21 8.00e-64 237.00
IUUC-Ggo-045179 Gorilla gorilla 94.33 0.00e+00 744.00
IUUC-Hsa-046114 Homo sapiens 95.04 0.00e+00 749.00
IUUC-Hvu-047331 Hordeum vulgare 33.85 3.00e-51 195.00
IUUC-Itr-048275 Ictidomys tridecemlineatus 95.27 0.00e+00 769.00
IUUC-Kpa-049304 Komagataella pastoris 28.89 2.00e-39 156.00
IUUC-Lch-050655 Latimeria chalumnae 77.01 2.00e-143 501.00
IUUC-Lpe-051675 Leersia perrieri 34.52 2.00e-57 216.00
IUUC-Loc-052868 Lepisosteus oculatus 80.61 0.00e+00 668.00
IUUC-Lma-053258 Leptosphaeria maculans 26.60 3.00e-30 127.00
IUUC-Laf-053993 Loxodonta africana 94.56 0.00e+00 769.00
IUUC-Mcc-055128 Macaca mulatta 77.54 2.00e-170 591.00
IUUC-Meu-056501 Macropus eugenii 78.02 1.00e-161 561.00
IUUC-Mor-057114 Magnaporthe oryzae 25.11 5.00e-24 105.00
IUUC-Mtr-058367 Medicago truncatula 35.89 1.00e-58 220.00
IUUC-Mla-059107 Melampsora laricipopulina 27.86 3.00e-28 119.00
IUUC-Mga-059745 Meleagris gallopavo 81.65 0.00e+00 686.00
IUUC-Mvi-060362 Microbotryum violaceum 29.35 1.00e-33 137.00
IUUC-Mdo-062257 Monodelphis domestica 85.44 0.00e+00 720.00
IUUC-Mmu-063546 Mus musculus 92.67 0.00e+00 754.00
IUUC-Mac-065540 Musa acuminata 33.82 7.00e-54 204.00
IUUC-Mpu-066284 Mustela putorius furo 97.40 0.00e+00 781.00
IUUC-Mlu-067241 Myotis lucifugus 95.98 0.00e+00 773.00
IUUC-Nfi-068260 Neosartorya fischeri 27.69 9.00e-33 134.00
IUUC-Ncr-068719 Neurospora crassa 26.74 6.00e-25 108.00
IUUC-Nle-068981 Nomascus leucogenys 95.04 0.00e+00 731.00
IUUC-Opr-071218 Ochotona princeps 87.19 0.00e+00 667.00
IUUC-Ont-071646 Oreochromis niloticus 77.83 0.00e+00 676.00
IUUC-Oan-073453 Ornithorhynchus anatinus 89.13 0.00e+00 756.00
IUUC-Ocu-074008 Oryctolagus cuniculus 95.98 0.00e+00 773.00
IUUC-Oba-075712 Oryza barthii 29.88 1.00e-40 160.00
IUUC-Obr-076721 Oryza brachyantha 34.29 5.00e-57 214.00
IUUC-Ogl-077229 Oryza glaberrima 33.73 2.00e-56 213.00
IUUC-Ogu-078977 Oryza glumaepatula 29.88 5.00e-41 162.00
IUUC-Oin-079683 Oryza indica 33.73 8.00e-57 214.00
IUUC-Olo-080291 Oryza longistaminata 29.73 5.00e-28 118.00
IUUC-Ome-081834 Oryza meridionalis 33.97 2.00e-57 216.00
IUUC-Oni-082507 Oryza nivara 32.61 9.00e-53 201.00
IUUC-Opu-083396 Oryza punctata 34.45 1.00e-57 217.00
IUUC-Oru-085220 Oryza rufipogon 32.85 1.00e-52 200.00
IUUC-Osa-085767 Oryza sativa 33.73 8.00e-57 214.00
IUUC-Ola-087420 Oryzias latipes 76.83 0.00e+00 667.00
IUUC-Olu-087740 Ostreococcus lucimarinus 27.40 2.00e-34 139.00
IUUC-Oga-088264 Otolemur garnettii 94.80 0.00e+00 751.00
IUUC-Oar-089335 Ovis aries 95.74 0.00e+00 771.00
IUUC-Ptr-091320 Pan troglodytes 95.04 0.00e+00 749.00
IUUC-Pan-092833 Papio anubis 94.33 0.00e+00 748.00
IUUC-Psi-093504 Pelodiscus sinensis 86.52 0.00e+00 731.00
IUUC-Pma-094189 Petromyzon marinus 68.40 3.00e-170 591.00
IUUC-Pno-094929 Phaeosphaeria nodorum 27.54 3.00e-31 129.00
IUUC-Ppa-095429 Physcomitrella patens 35.76 3.00e-63 235.00
IUUC-Pfo-096337 Poecilia formosa 75.65 0.00e+00 674.00
IUUC-Pab-097571 Pongo abelii 94.56 0.00e+00 748.00
IUUC-Pop-099977 Populus trichocarpa 35.34 5.00e-62 231.00
IUUC-Pca-100394 Procavia capensis 89.24 0.00e+00 671.00
IUUC-Ppe-101848 Prunus persica 34.38 1.00e-57 217.00
IUUC-Pva-102921 Pteropus vampyrus 95.14 1.00e-115 409.00
IUUC-Pgr-103637 Puccinia graminis 27.68 4.00e-33 135.00
IUUC-Ptt-103781 Puccinia triticina 28.17 2.00e-33 136.00
IUUC-Pte-104135 Pyrenophora teres 25.83 2.00e-31 132.00
IUUC-Pyt-104609 Pyrenophora triticirepentis 25.71 2.00e-30 126.00
IUUC-Rno-105114 Rattus norvegicus 92.20 0.00e+00 755.00
IUUC-Sce-106401 Saccharomyces cerevisiae 29.82 1.00e-39 157.00
IUUC-Sha-107122 Sarcophilus harrisii 85.89 0.00e+00 690.00
IUUC-Sja-107766 Schizosaccharomyces japonicus 30.84 2.00e-46 179.00
IUUC-Spo-108134 Schizosaccharomyces pombe 28.83 2.00e-37 150.00
IUUC-Ssl-108398 Sclerotinia sclerotiorum 29.46 1.00e-35 144.00
IUUC-Smo-108720 Selaginella moellendorffii 33.57 6.00e-56 211.00
IUUC-Sit-110311 Setaria italica 36.06 5.00e-56 211.00
IUUC-Sly-111178 Solanum lycopersicum 33.33 1.00e-54 206.00
IUUC-Stu-112778 Solanum tuberosum 34.84 1.00e-58 220.00
IUUC-Sar-113596 Sorex araneus 78.25 2.00e-174 604.00
IUUC-Sbi-114193 Sorghum bicolor 35.22 3.00e-57 216.00
IUUC-Sre-115002 Sporisorium reilianum 24.57 2.00e-10 60.80
IUUC-Ssc-116066 Sus scrofa 95.98 0.00e+00 771.00
IUUC-Tgu-117048 Taeniopygia guttata 84.84 0.00e+00 639.00
IUUC-Tsy-119573 Tarsius syrichta 62.20 7.00e-131 460.00
IUUC-Tni-119820 Tetraodon nigroviridis 75.77 0.00e+00 670.00
IUUC-Tca-121605 Theobroma cacao 35.10 6.00e-59 221.00
IUUC-Tre-121947 Trichoderma reesei 26.81 2.00e-33 136.00
IUUC-Tvi-122481 Trichoderma virens 27.02 1.00e-34 140.00
IUUC-Tae-125861 Triticum aestivum 32.62 8.00e-56 211.00
IUUC-Tur-126586 Triticum urartu 34.10 2.00e-53 203.00
IUUC-Tme-126900 Tuber melanosporum 31.68 1.00e-47 183.00
IUUC-Tbe-127736 Tupaia belangeri 72.11 7.00e-151 526.00
IUUC-Ttr-129041 Tursiops truncatus 84.16 0.00e+00 662.00
IUUC-Vpa-130260 Vicugna pacos 96.22 0.00e+00 775.00
IUUC-Vvi-131009 Vitis vinifera 34.76 5.00e-58 218.00
IUUC-Xtr-132083 Xenopus tropicalis 80.14 0.00e+00 671.00
IUUC-Xma-133094 Xiphophorus maculatus 75.18 0.00e+00 672.00
IUUC-Yli-134531 Yarrowia lipolytica 23.25 3.00e-18 86.70
IUUC-Zma-135509 Zea mays 33.81 1.00e-57 217.00
Created Date 25-Jun-2017

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