iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027781

Ensembl Protein ID

ENSDARP00000123754.1

UniProt Accession

A9JRP8; A9JRP8_DANRE

Genbank Protein ID

AAI55745.1

Protein Name

Zgc:86896

Genbank Nucleotide ID

BX897685

Gene Name

zgc:86896

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000090369.5	ENSDART00000149532.2	ENSDARP00000123754.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-14	52.7	51	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++++t++++ ++ +++v+++ D + +vW l++gv
   Q: 51   HSGRITGIDWaPEsNRIVTCASDRNAYVWTLKDGV 85
           9**********888****************99997 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSLYSFGLEP LSCHAWNKDR TQIAISPNSS DVHIYQMNGK EWIKIHELTE HSGRITGIDW 60
APESNRIVTC ASDRNAYVWT LKDGVWKPTL VLVRINRAAT CVKWSPLENK FALGSGAKLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCTCATTC GTGTCGACTG CCCAGAGTCC ACGAACTCAG CCTTTCAAAA GCTCCAGCAC 60
AAGGATTCAG GACATTTCAC TACCTAGCAA AAGAGAGGAA GAAATAAAGG TGAGGGCATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0051015--F:actin filament binding
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	42.90	7.00e-64	238.00
IUUC-Atr-002844	Amborella trichopoda	46.26	3.00e-54	205.00
IUUC-Ago-007966	Ashbya gossypii	37.74	3.00e-67	249.00
IUUC-Ame-010874	Astyanax mexicanus	86.80	0.00e+00	649.00
IUUC-Bdi-014632	Brachypodium distachyon	42.06	7.00e-78	284.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	34.18	3.00e-34	138.00
IUUC-Gmo-038608	Gadus morhua	79.78	4.00e-173	600.00
IUUC-Gac-042536	Gasterosteus aculeatus	82.02	0.00e+00	633.00
IUUC-Hvu-047456	Hordeum vulgare	32.77	4.00e-19	87.80
IUUC-Lpe-050869	Leersia perrieri	41.29	1.00e-77	283.00
IUUC-Loc-051844	Lepisosteus oculatus	82.17	2.00e-179	621.00
IUUC-Ont-072444	Oreochromis niloticus	83.43	0.00e+00	632.00
IUUC-Ola-086754	Oryzias latipes	80.34	3.00e-180	624.00
IUUC-Pfo-097144	Poecilia formosa	82.87	3.00e-170	590.00
IUUC-Pop-098954	Populus trichocarpa	37.40	4.00e-44	171.00
IUUC-Sit-110150	Setaria italica	41.42	2.00e-80	292.00
IUUC-Tru-118343	Takifugu rubripes	80.95	5.00e-179	620.00
IUUC-Tae-123562	Triticum aestivum	42.49	9.00e-73	267.00
IUUC-Tur-126640	Triticum urartu	41.16	2.00e-70	259.00
IUUC-Xtr-131770	Xenopus tropicalis	66.01	1.00e-150	526.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence