iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093767

Ensembl Protein ID

ENSPSIP00000012277.1

UniProt Accession

K7FW67; K7FW67_PELSI

Genbank Protein ID

ENSPSIP00000012277

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01018260

Gene Name

ARPC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000011034.1	ENSPSIT00000012336.1	ENSPSIP00000012277.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-14	53.3	51	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++ +t++++ +  +++v+++ D + +vW+ ++gv
   Q: 51   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQKDGV 85
           9999*******6669**************988776 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MSLHQFLLEP ITCHAWNRDR TQIAISPNNH EVHIYKKSGN QWVKAHELKE HNGHITGIDW 60
APKSDRIVTC GADRNAYVWS QKDGVWKPTL VILRINRAAT FVKWSPLENK FAVGSGARLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCTAC ATCAATTTTT ACTAGAACCA ATCACCTGCC ATGCCTGGAA CAGAGATCGT 60
ACTCGTAAGT CCCCATATGC ATTAACTTTT CCCCTTTGGT ATTTTGCACA TGCTGTAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0036195--C:muscle cell projection membrane
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

pss:102452345

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	44.29	2.00e-61	229.00
IUUC-Aml-002044	Ailuropoda melanoleuca	95.14	0.00e+00	714.00
IUUC-Atr-002844	Amborella trichopoda	50.47	1.00e-53	202.00
IUUC-Apl-003325	Anas platyrhynchos	99.19	0.00e+00	769.00
IUUC-Aca-004736	Anolis carolinensis	97.30	0.00e+00	758.00
IUUC-Aly-006568	Arabidopsis lyrata	41.44	9.00e-79	286.00
IUUC-Ath-006683	Arabidopsis thaliana	41.71	2.00e-78	285.00
IUUC-Ago-007966	Ashbya gossypii	39.52	4.00e-67	248.00
IUUC-Acl-008334	Aspergillus clavatus	47.50	1.00e-93	336.00
IUUC-Afl-008485	Aspergillus flavus	47.65	1.00e-90	327.00
IUUC-Afu-008780	Aspergillus fumigatus	47.22	4.00e-95	340.00
IUUC-Ani-009417	Aspergillus nidulans	47.63	8.00e-94	336.00
IUUC-Ang-009543	Aspergillus niger	49.03	1.00e-95	342.00
IUUC-Aor-010234	Aspergillus oryzae	47.92	2.00e-92	332.00
IUUC-Ate-010386	Aspergillus terreus	48.47	8.00e-96	343.00
IUUC-Ame-011852	Astyanax mexicanus	92.97	0.00e+00	723.00
IUUC-Bgr-012192	Blumeria graminis	44.20	6.00e-86	310.00
IUUC-Bta-012530	Bos taurus	95.14	0.00e+00	713.00
IUUC-Bci-013616	Botrytis cinerea	46.26	2.00e-89	322.00
IUUC-Bdi-014632	Brachypodium distachyon	41.62	1.00e-75	276.00
IUUC-Bol-016274	Brassica oleracea	42.13	2.00e-80	292.00
IUUC-Bra-016790	Brassica rapa	41.07	1.00e-79	290.00
IUUC-Cel-018122	Caenorhabditis elegans	56.44	2.00e-112	399.00
IUUC-Cja-019362	Callithrix jacchus	94.86	0.00e+00	714.00
IUUC-Cfa-020167	Canis familiaris	95.14	0.00e+00	715.00
IUUC-Cpo-021933	Cavia porcellus	95.14	0.00e+00	715.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.71	3.00e-34	137.00
IUUC-Csa-023277	Chlorocebus sabaeus	75.07	5.00e-172	596.00
IUUC-Cho-024449	Choloepus hoffmanni	71.67	1.00e-92	332.00
IUUC-Cin-025186	Ciona intestinalis	56.22	4.00e-118	417.00
IUUC-Csv-026275	Ciona savignyi	56.32	1.00e-114	405.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	45.68	2.00e-90	325.00
IUUC-Cne-026926	Cryptococcus neoformans	46.65	2.00e-99	355.00
IUUC-Dre-028057	Danio rerio	92.70	0.00e+00	720.00
IUUC-Dno-029092	Dasypus novemcinctus	93.85	0.00e+00	682.00
IUUC-Dor-030391	Dipodomys ordii	94.41	0.00e+00	686.00
IUUC-Dse-031574	Dothistroma septosporum	45.21	2.00e-84	305.00
IUUC-Dme-031907	Drosophila melanogaster	58.76	3.00e-126	444.00
IUUC-Ete-032299	Echinops telfairi	67.29	3.00e-157	547.00
IUUC-Eca-034074	Equus caballus	95.14	0.00e+00	713.00
IUUC-Eeu-035041	Erinaceus europaeus	79.50	2.00e-90	325.00
IUUC-Fca-036154	Felis catus	95.14	0.00e+00	714.00
IUUC-Fal-037279	Ficedula albicollis	98.92	0.00e+00	766.00
IUUC-Fox-037842	Fusarium oxysporum	46.52	2.00e-89	322.00
IUUC-Fso-038276	Fusarium solani	46.67	2.00e-89	322.00
IUUC-Gmo-039673	Gadus morhua	89.46	0.00e+00	657.00
IUUC-Ggr-039762	Gaeumannomyces graminis	45.43	2.00e-89	322.00
IUUC-Gga-040189	Gallus gallus	98.65	0.00e+00	764.00
IUUC-Gac-042531	Gasterosteus aculeatus	90.27	0.00e+00	664.00
IUUC-Gma-043227	Glycine max	42.40	3.00e-78	285.00
IUUC-Ggo-045355	Gorilla gorilla	54.01	8.00e-117	413.00
IUUC-Hsa-046309	Homo sapiens	95.14	0.00e+00	714.00
IUUC-Hvu-047456	Hordeum vulgare	28.92	4.00e-14	70.50
IUUC-Itr-047864	Ictidomys tridecemlineatus	95.14	0.00e+00	714.00
IUUC-Kpa-049288	Komagataella pastoris	40.92	1.00e-76	279.00
IUUC-Lch-050427	Latimeria chalumnae	92.72	0.00e+00	724.00
IUUC-Lpe-050869	Leersia perrieri	40.87	5.00e-75	274.00
IUUC-Loc-052532	Lepisosteus oculatus	94.35	0.00e+00	706.00
IUUC-Lma-053109	Leptosphaeria maculans	45.30	1.00e-88	319.00
IUUC-Laf-054271	Loxodonta africana	94.86	0.00e+00	713.00
IUUC-Mcc-054857	Macaca mulatta	93.73	0.00e+00	689.00
IUUC-Meu-056540	Macropus eugenii	93.10	0.00e+00	625.00
IUUC-Mor-057167	Magnaporthe oryzae	44.48	1.00e-86	312.00
IUUC-Mtr-057659	Medicago truncatula	43.47	4.00e-81	294.00
IUUC-Mla-058886	Melampsora laricipopulina	43.29	2.00e-89	322.00
IUUC-Mga-059327	Meleagris gallopavo	98.65	0.00e+00	764.00
IUUC-Mvi-060302	Microbotryum violaceum	46.43	7.00e-94	337.00
IUUC-Mmr-060765	Microcebus murinus	93.48	0.00e+00	692.00
IUUC-Mdo-062326	Monodelphis domestica	96.49	0.00e+00	725.00
IUUC-Mmu-063819	Mus musculus	94.32	0.00e+00	712.00
IUUC-Mac-064632	Musa acuminata	41.30	2.00e-79	289.00
IUUC-Mpu-066247	Mustela putorius furo	66.49	7.00e-152	529.00
IUUC-Mlu-067184	Myotis lucifugus	95.41	0.00e+00	717.00
IUUC-Nfi-068383	Neosartorya fischeri	47.50	4.00e-95	341.00
IUUC-Ncr-068777	Neurospora crassa	44.51	5.00e-89	320.00
IUUC-Nle-069900	Nomascus leucogenys	95.14	0.00e+00	714.00
IUUC-Opr-070386	Ochotona princeps	86.22	0.00e+00	628.00
IUUC-Ont-071283	Oreochromis niloticus	90.81	0.00e+00	667.00
IUUC-Oan-073139	Ornithorhynchus anatinus	97.57	0.00e+00	730.00
IUUC-Ocu-074340	Oryctolagus cuniculus	95.14	0.00e+00	714.00
IUUC-Oba-075379	Oryza barthii	41.21	1.00e-75	276.00
IUUC-Obr-076404	Oryza brachyantha	41.03	8.00e-77	280.00
IUUC-Ogl-077409	Oryza glaberrima	38.36	6.00e-69	254.00
IUUC-Ogu-078759	Oryza glumaepatula	41.21	1.00e-75	276.00
IUUC-Oin-079118	Oryza indica	41.10	4.00e-76	278.00
IUUC-Olo-081055	Oryza longistaminata	40.99	8.00e-66	243.00
IUUC-Ome-081281	Oryza meridionalis	41.21	1.00e-75	276.00
IUUC-Oni-083043	Oryza nivara	41.21	1.00e-75	276.00
IUUC-Opu-083392	Oryza punctata	33.24	3.00e-52	198.00
IUUC-Oru-084839	Oryza rufipogon	41.21	1.00e-75	276.00
IUUC-Osa-085377	Oryza sativa	41.10	5.00e-76	277.00
IUUC-Ola-087274	Oryzias latipes	88.95	0.00e+00	645.00
IUUC-Oga-088016	Otolemur garnettii	94.59	0.00e+00	711.00
IUUC-Oar-090122	Ovis aries	94.86	0.00e+00	713.00
IUUC-Ptr-091548	Pan troglodytes	95.14	0.00e+00	714.00
IUUC-Pan-091727	Papio anubis	67.02	7.00e-156	542.00
IUUC-Pma-094124	Petromyzon marinus	78.86	8.00e-180	622.00
IUUC-Pno-095031	Phaeosphaeria nodorum	46.45	1.00e-89	322.00
IUUC-Ppa-095858	Physcomitrella patens	45.80	1.00e-85	310.00
IUUC-Pfo-097107	Poecilia formosa	90.27	0.00e+00	662.00
IUUC-Pab-098238	Pongo abelii	66.76	6.00e-155	540.00
IUUC-Pop-098954	Populus trichocarpa	36.74	3.00e-42	164.00
IUUC-Pca-100580	Procavia capensis	65.95	2.00e-151	528.00
IUUC-Ppe-101681	Prunus persica	41.02	6.00e-78	283.00
IUUC-Pva-102908	Pteropus vampyrus	92.82	0.00e+00	626.00
IUUC-Pgr-103309	Puccinia graminis	45.01	5.00e-93	334.00
IUUC-Ptt-103959	Puccinia triticina	45.09	3.00e-95	341.00
IUUC-Pte-104384	Pyrenophora teres	46.54	5.00e-88	317.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	46.54	8.00e-88	316.00
IUUC-Rno-105008	Rattus norvegicus	93.88	6.00e-180	622.00
IUUC-Sce-106411	Saccharomyces cerevisiae	37.37	5.00e-65	241.00
IUUC-Sha-106691	Sarcophilus harrisii	97.28	0.00e+00	723.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	46.22	1.00e-88	319.00
IUUC-Spo-108053	Schizosaccharomyces pombe	44.53	7.00e-89	320.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	46.26	2.00e-89	322.00
IUUC-Smo-108836	Selaginella moellendorffii	44.95	5.00e-82	297.00
IUUC-Sit-110150	Setaria italica	41.67	7.00e-78	283.00
IUUC-Sly-111048	Solanum lycopersicum	41.33	2.00e-75	275.00
IUUC-Sar-113599	Sorex araneus	82.40	2.00e-168	584.00
IUUC-Sbi-114685	Sorghum bicolor	42.43	2.00e-75	275.00
IUUC-Sre-115090	Sporisorium reilianum	46.08	1.00e-97	349.00
IUUC-Ssc-115851	Sus scrofa	94.86	0.00e+00	713.00
IUUC-Tgu-116701	Taeniopygia guttata	98.92	0.00e+00	766.00
IUUC-Tru-117603	Takifugu rubripes	89.10	0.00e+00	669.00
IUUC-Tsy-119515	Tarsius syrichta	87.50	2.00e-73	268.00
IUUC-Tni-119844	Tetraodon nigroviridis	91.35	0.00e+00	666.00
IUUC-Tca-121645	Theobroma cacao	42.86	1.00e-79	289.00
IUUC-Tre-122045	Trichoderma reesei	45.96	1.00e-88	319.00
IUUC-Tvi-122523	Trichoderma virens	45.83	4.00e-89	320.00
IUUC-Tae-125810	Triticum aestivum	36.56	7.00e-69	254.00
IUUC-Tur-126640	Triticum urartu	39.12	8.00e-66	243.00
IUUC-Tme-127018	Tuber melanosporum	45.48	2.00e-86	311.00
IUUC-Tbe-127321	Tupaia belangeri	94.80	0.00e+00	625.00
IUUC-Ttr-128178	Tursiops truncatus	94.54	0.00e+00	665.00
IUUC-Uma-129423	Ustilago maydis	45.81	6.00e-99	353.00
IUUC-Vda-129706	Verticillium dahliae	46.83	3.00e-91	328.00
IUUC-Vvi-131647	Vitis vinifera	42.20	7.00e-78	283.00
IUUC-Xtr-132735	Xenopus tropicalis	87.33	0.00e+00	642.00
IUUC-Xma-133435	Xiphophorus maculatus	90.27	0.00e+00	662.00
IUUC-Yli-134471	Yarrowia lipolytica	46.07	1.00e-82	299.00
IUUC-Zma-135615	Zea mays	41.19	2.00e-78	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence