iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049201

Ensembl Protein ID

CAY67593

UniProt Accession

C4QWH0; C4QWH0_KOMPG

Genbank Protein ID

CAY67593.1

Protein Name

Nuclear pore protein that is part of the evolutionarily conserved Nup84p complex

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-1_0224

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-1_0224	CAY67593	CAY67593

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-24	81.4	215	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.....sd.tllvsGsdDgtikvWDlrtgv 34
           H + ++++++      +  l+++G+ Dg+++++ lrt +
   Q: 215  HHGLIRSVSWapsmgRSfQLIATGCKDGNVRIFKLRTEP 253
           7789*******988766788***************9975 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MREPVKAFTT GHEELIHDIE YDFYGKQLAT CSSDQHIKVF DFDPSTSTWI LNDSWKAHDS 60
SVVKLAYASP EFGHILASIS YDRTIKIWEQ DLDEEAGSGK RWKRLATIAD SHGPLYDLAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGGAAC CAGTCAAAGC ATTCACAACA GGGCATGAAG AGCTGATACA CGATATTGAG 60
TACGATTTTT ATGGAAAGCA ATTAGCTACG TGCTCATCAG ACCAACATAT CAAAGTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0097042--C:extrinsic component of fungal-type vacuolar membrane
GO:0034399--C:nuclear periphery
GO:0031080--C:nuclear pore outer ring
GO:0035859--C:Seh1-associated complex
GO:1904263--P:positive regulation of TORC1 signaling

KEGG

ppa:PAS_chr1-1_0224

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	37.26	8.00e-49	185.00
IUUC-Apl-003654	Anas platyrhynchos	35.51	3.00e-37	146.00
IUUC-Aca-004378	Anolis carolinensis	35.21	5.00e-38	149.00
IUUC-Ago-007816	Ashbya gossypii	63.64	6.00e-113	398.00
IUUC-Acl-008248	Aspergillus clavatus	27.25	4.00e-33	133.00
IUUC-Afl-008667	Aspergillus flavus	31.23	5.00e-34	136.00
IUUC-Afu-008961	Aspergillus fumigatus	30.29	1.00e-33	135.00
IUUC-Ani-009218	Aspergillus nidulans	31.23	1.00e-35	141.00
IUUC-Ang-009693	Aspergillus niger	30.35	2.00e-32	130.00
IUUC-Ate-010349	Aspergillus terreus	31.44	2.00e-33	134.00
IUUC-Ame-011945	Astyanax mexicanus	34.86	1.00e-49	188.00
IUUC-Bta-013306	Bos taurus	36.25	4.00e-49	186.00
IUUC-Cel-018235	Caenorhabditis elegans	29.54	4.00e-35	139.00
IUUC-Cja-018849	Callithrix jacchus	36.59	1.00e-49	187.00
IUUC-Cfa-020841	Canis familiaris	36.09	1.00e-48	187.00
IUUC-Cpo-021379	Cavia porcellus	35.62	8.00e-48	181.00
IUUC-Csa-023900	Chlorocebus sabaeus	36.56	3.00e-49	186.00
IUUC-Cho-024660	Choloepus hoffmanni	35.38	9.00e-37	145.00
IUUC-Cin-025471	Ciona intestinalis	32.08	2.00e-39	153.00
IUUC-Csv-026242	Ciona savignyi	33.33	3.00e-37	146.00
IUUC-Cgl-026501	Colletotrichum gloeosporioides	24.14	1.00e-25	108.00
IUUC-Cne-026855	Cryptococcus neoformans	35.37	1.00e-23	102.00
IUUC-Dre-028068	Danio rerio	36.22	9.00e-51	191.00
IUUC-Dno-029981	Dasypus novemcinctus	36.50	7.00e-53	199.00
IUUC-Dse-031420	Dothistroma septosporum	28.33	4.00e-37	146.00
IUUC-Dme-031763	Drosophila melanogaster	32.92	1.00e-44	171.00
IUUC-Eca-033425	Equus caballus	35.74	1.00e-37	147.00
IUUC-Eeu-035119	Erinaceus europaeus	40.95	3.00e-20	90.50
IUUC-Fca-036520	Felis catus	36.25	4.00e-49	186.00
IUUC-Fal-037234	Ficedula albicollis	35.51	5.00e-37	148.00
IUUC-Fso-038113	Fusarium solani	26.98	2.00e-23	101.00
IUUC-Gmo-039013	Gadus morhua	34.88	4.00e-49	186.00
IUUC-Gga-041059	Gallus gallus	36.36	3.00e-49	187.00
IUUC-Gac-041337	Gasterosteus aculeatus	34.36	6.00e-49	185.00
IUUC-Ggo-044944	Gorilla gorilla	36.45	4.00e-49	186.00
IUUC-Hsa-046038	Homo sapiens	36.45	3.00e-49	186.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	35.38	3.00e-37	146.00
IUUC-Lch-050466	Latimeria chalumnae	31.25	2.00e-41	160.00
IUUC-Loc-052773	Lepisosteus oculatus	30.68	1.00e-44	172.00
IUUC-Lma-053000	Leptosphaeria maculans	23.38	2.00e-31	128.00
IUUC-Laf-053409	Loxodonta africana	35.33	3.00e-49	186.00
IUUC-Mor-057223	Magnaporthe oryzae	26.15	4.00e-21	93.60
IUUC-Mpo-057506	Magnaporthe poae	28.00	4.00e-18	83.60
IUUC-Mla-058820	Melampsora laricipopulina	27.63	2.00e-33	134.00
IUUC-Mga-059348	Meleagris gallopavo	35.51	1.00e-37	147.00
IUUC-Mvi-060477	Microbotryum violaceum	31.98	2.00e-23	101.00
IUUC-Mmr-060977	Microcebus murinus	35.92	3.00e-38	149.00
IUUC-Mdo-061806	Monodelphis domestica	36.88	1.00e-49	188.00
IUUC-Mmu-064328	Mus musculus	35.62	2.00e-50	190.00
IUUC-Mpu-066873	Mustela putorius furo	37.26	6.00e-49	186.00
IUUC-Mlu-067563	Myotis lucifugus	35.89	2.00e-49	187.00
IUUC-Nfi-068299	Neosartorya fischeri	30.29	2.00e-33	134.00
IUUC-Nle-068977	Nomascus leucogenys	36.58	5.00e-42	162.00
IUUC-Ont-072644	Oreochromis niloticus	34.88	3.00e-49	187.00
IUUC-Oan-073098	Ornithorhynchus anatinus	35.74	2.00e-37	147.00
IUUC-Ocu-073911	Oryctolagus cuniculus	36.56	3.00e-49	186.00
IUUC-Ola-087096	Oryzias latipes	35.46	3.00e-49	186.00
IUUC-Oga-088798	Otolemur garnettii	36.56	2.00e-49	187.00
IUUC-Oar-090298	Ovis aries	35.02	6.00e-36	145.00
IUUC-Ptr-091074	Pan troglodytes	36.88	1.00e-49	187.00
IUUC-Pan-092013	Papio anubis	36.86	2.00e-40	156.00
IUUC-Psi-093508	Pelodiscus sinensis	35.51	9.00e-38	148.00
IUUC-Pma-094288	Petromyzon marinus	41.67	9.00e-38	147.00
IUUC-Pno-094777	Phaeosphaeria nodorum	24.24	7.00e-32	129.00
IUUC-Pfo-096384	Poecilia formosa	35.17	1.00e-49	188.00
IUUC-Pab-098629	Pongo abelii	36.56	2.00e-49	187.00
IUUC-Pva-102861	Pteropus vampyrus	36.25	6.00e-49	186.00
IUUC-Pte-104375	Pyrenophora teres	25.84	6.00e-33	133.00
IUUC-Pyt-104586	Pyrenophora triticirepentis	25.84	1.00e-32	132.00
IUUC-Rno-104895	Rattus norvegicus	34.66	1.00e-37	151.00
IUUC-Sce-106420	Saccharomyces cerevisiae	55.62	4.00e-107	379.00
IUUC-Sha-106829	Sarcophilus harrisii	35.26	5.00e-39	152.00
IUUC-Sja-107923	Schizosaccharomyces japonicus	38.29	2.00e-74	270.00
IUUC-Spo-108184	Schizosaccharomyces pombe	40.85	2.00e-76	276.00
IUUC-Sar-113279	Sorex araneus	35.38	6.00e-37	145.00
IUUC-Ssc-115589	Sus scrofa	34.88	2.00e-38	150.00
IUUC-Tgu-117523	Taeniopygia guttata	36.36	2.00e-49	187.00
IUUC-Tru-117985	Takifugu rubripes	33.45	7.00e-37	148.00
IUUC-Tsy-118913	Tarsius syrichta	35.23	4.00e-34	136.00
IUUC-Tni-120670	Tetraodon nigroviridis	34.88	7.00e-50	188.00
IUUC-Tre-121984	Trichoderma reesei	27.56	5.00e-24	103.00
IUUC-Tme-126885	Tuber melanosporum	42.90	8.00e-71	258.00
IUUC-Tbe-127344	Tupaia belangeri	29.21	4.00e-30	123.00
IUUC-Ttr-128347	Tursiops truncatus	35.38	5.00e-37	146.00
IUUC-Vda-129755	Verticillium dahliae	26.16	2.00e-22	98.20
IUUC-Vpa-130656	Vicugna pacos	34.51	1.00e-37	147.00
IUUC-Vvi-131103	Vitis vinifera	23.57	8.00e-26	108.00
IUUC-Xtr-132736	Xenopus tropicalis	35.87	1.00e-49	187.00
IUUC-Xma-133678	Xiphophorus maculatus	35.26	2.00e-49	187.00
IUUC-Yli-134659	Yarrowia lipolytica	52.27	3.00e-99	352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence