iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131717

Ensembl Protein ID

VIT_08s0007g02920.t01

UniProt Accession

F6HKN3; F6HKN3_VITVI

Genbank Protein ID

CCB55455.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595991

Gene Name

VIT_08s0007g02920

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0007g02920	VIT_08s0007g02920.t01	VIT_08s0007g02920.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.70e-20	70.8	122	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           ++ +t++++   d ++++++s D t+ +WD+
   Q: 122  NSAITSFDWaqLDaRRIATCSVDTTCTIWDV 152
           678********888****************8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MQSPVEKKPG VYTYMAQWPI YSLAWSVRRD KKSRLAVGSF LEDYSNKVEV VQFSQETLDF 60
STDSRLVFDH PYAPTKLMFF PSEEAMNPDL IATSGDYLRL WEIHDDRIEL KALLNGNKSE 120

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Nucleotide Sequence
(Fasta)

CAGAGCTTTT CCGGCTGTGA GTCATTCAGC AATGTAAGTA TTTTATTCTG TCCCTTTCTA 60
TGCGCCATTG GTAAGAGAGC GTAGAACTAA GACTAACACC ATTAGAGTTC GTTTATCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

vvi:100254525

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007732	Ashbya gossypii	30.43	7.00e-40	157.00
IUUC-Kpa-049347	Komagataella pastoris	33.51	7.00e-46	177.00
IUUC-Pop-098949	Populus trichocarpa	75.15	1.00e-154	537.00
IUUC-Ppe-101603	Prunus persica	75.85	3.00e-137	479.00
IUUC-Sce-106252	Saccharomyces cerevisiae	32.20	6.00e-49	187.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence