iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pgr-103268

Ensembl Protein ID

EFP82945

UniProt Accession

E3KFB8; E3KFB8_PUCGT

Genbank Protein ID

EFP82945.1

Protein Name

Large subunit ribosomal protein L40e

Genbank Nucleotide ID

DS178284

Gene Name

PGTG_09913

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGTG_09913	EFP82945	EFP82945

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.30e-41	139.6	77	152
ULD/UDP/UBQ/UBQ_PIM	5.90e-28	96.3	77	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 77   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 77   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 149
           99********************************************************************986 PP

Organism

Puccinia graminis

Protein Sequence
(Fasta)

MCICFIPVAV AGQAKAATFG VGGGELLPAS RPGGSTQTAD DATFPLPAGP PASTATSLPL 60
TRPSVGPIEL VKESFKMQIF VKTLTGKTIT LEVESSDTID NVKAKIQDKE GIPPDQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGTATGT ATGTTGTATG GTTTTCATTG TATTGGACAA ACATCCTTAA ACCATACTCA 60
AACTTTGGGA CACAGGTGTT CCTGACCCTC CCCCCTCCAA AAACAGTGGA CCTTTCCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR001975--Ribosomal_L40e
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01377--Ribosomal_L40e
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

pgr:PGTG_09913

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001006	Aegilops tauschii	59.60	1.00e-45	173.00
IUUC-Aml-001246	Ailuropoda melanoleuca	86.72	9.00e-65	236.00
IUUC-Atr-003081	Amborella trichopoda	70.99	2.00e-43	165.00
IUUC-Ath-007098	Arabidopsis thaliana	89.84	5.00e-66	240.00
IUUC-Ago-007932	Ashbya gossypii	93.75	1.00e-69	252.00
IUUC-Acl-008350	Aspergillus clavatus	86.47	2.00e-65	238.00
IUUC-Afl-008554	Aspergillus flavus	92.97	2.00e-69	252.00
IUUC-Afu-008984	Aspergillus fumigatus	91.60	3.00e-69	251.00
IUUC-Ang-009609	Aspergillus niger	92.19	2.00e-68	248.00
IUUC-Aor-009991	Aspergillus oryzae	91.34	3.00e-67	244.00
IUUC-Ate-010252	Aspergillus terreus	92.80	2.00e-67	248.00
IUUC-Ame-010785	Astyanax mexicanus	86.17	3.00e-47	177.00
IUUC-Bgr-012115	Blumeria graminis	90.40	2.00e-66	242.00
IUUC-Bta-013360	Bos taurus	86.72	9.00e-65	236.00
IUUC-Bci-013851	Botrytis cinerea	94.53	4.00e-70	254.00
IUUC-Bdi-014499	Brachypodium distachyon	91.41	2.00e-67	245.00
IUUC-Bol-015961	Brassica oleracea	90.62	1.00e-66	242.00
IUUC-Cel-018677	Caenorhabditis elegans	88.28	7.00e-66	240.00
IUUC-Cja-019572	Callithrix jacchus	86.72	9.00e-65	236.00
IUUC-Cfa-020339	Canis familiaris	86.72	9.00e-65	236.00
IUUC-Cpo-021534	Cavia porcellus	86.72	9.00e-65	236.00
IUUC-Cre-022567	Chlamydomonas reinhardtii	91.41	4.00e-67	244.00
IUUC-Csa-023398	Chlorocebus sabaeus	86.72	9.00e-65	236.00
IUUC-Cin-025266	Ciona intestinalis	86.72	6.00e-65	237.00
IUUC-Csv-026105	Ciona savignyi	86.61	1.00e-64	236.00
IUUC-Cgl-026502	Colletotrichum gloeosporioides	92.80	5.00e-67	247.00
IUUC-Cne-026913	Cryptococcus neoformans	93.75	2.00e-69	252.00
IUUC-Cme-027344	Cyanidioschyzon merolae	92.31	2.00e-45	172.00
IUUC-Dre-028761	Danio rerio	88.28	1.00e-65	239.00
IUUC-Dno-028899	Dasypus novemcinctus	86.72	5.00e-64	234.00
IUUC-Dor-030658	Dipodomys ordii	96.05	3.00e-39	150.00
IUUC-Dme-031588	Drosophila melanogaster	88.28	2.00e-65	239.00
IUUC-Ete-033120	Echinops telfairi	86.72	9.00e-65	236.00
IUUC-Eca-033787	Equus caballus	86.72	9.00e-65	236.00
IUUC-Eeu-035081	Erinaceus europaeus	94.29	8.00e-34	133.00
IUUC-Fca-035725	Felis catus	86.72	9.00e-65	236.00
IUUC-Fox-037870	Fusarium oxysporum	92.97	2.00e-69	251.00
IUUC-Fso-038461	Fusarium solani	96.25	4.00e-42	160.00
IUUC-Gmo-039163	Gadus morhua	87.60	1.00e-65	239.00
IUUC-Ggr-040034	Gaeumannomyces graminis	93.02	5.00e-70	254.00
IUUC-Gga-040909	Gallus gallus	86.72	8.00e-65	236.00
IUUC-Gac-041640	Gasterosteus aculeatus	87.50	4.00e-65	238.00
IUUC-Gma-043254	Glycine max	89.31	6.00e-68	247.00
IUUC-Ggo-045411	Gorilla gorilla	86.72	9.00e-65	236.00
IUUC-Hsa-046609	Homo sapiens	67.88	2.00e-49	185.00
IUUC-Hvu-047579	Hordeum vulgare	69.12	3.00e-51	192.00
IUUC-Itr-048586	Ictidomys tridecemlineatus	86.05	3.00e-65	239.00
IUUC-Kpa-049279	Komagataella pastoris	92.19	1.00e-68	249.00
IUUC-Lch-049971	Latimeria chalumnae	87.02	4.00e-66	242.00
IUUC-Lpe-051472	Leersia perrieri	78.42	6.00e-52	196.00
IUUC-Loc-052117	Lepisosteus oculatus	85.61	4.00e-67	244.00
IUUC-Lma-053049	Leptosphaeria maculans	92.19	5.00e-69	250.00
IUUC-Laf-054284	Loxodonta africana	86.05	2.00e-65	239.00
IUUC-Mcc-055710	Macaca mulatta	85.38	1.00e-63	234.00
IUUC-Meu-056411	Macropus eugenii	86.72	9.00e-65	236.00
IUUC-Mor-057008	Magnaporthe oryzae	92.97	5.00e-69	250.00
IUUC-Mpo-057360	Magnaporthe poae	92.97	1.00e-69	252.00
IUUC-Mtr-058437	Medicago truncatula	89.84	9.00e-66	239.00
IUUC-Mla-059080	Melampsora laricipopulina	95.00	3.00e-53	197.00
IUUC-Mmr-061335	Microcebus murinus	81.25	2.00e-58	215.00
IUUC-Mdo-062752	Monodelphis domestica	86.72	9.00e-65	236.00
IUUC-Mmu-063548	Mus musculus	86.72	3.00e-65	239.00
IUUC-Mac-064915	Musa acuminata	91.41	5.00e-67	244.00
IUUC-Mpu-066513	Mustela putorius furo	86.72	9.00e-65	236.00
IUUC-Mlu-068010	Myotis lucifugus	85.16	2.00e-63	231.00
IUUC-Nfi-068358	Neosartorya fischeri	90.77	3.00e-68	248.00
IUUC-Ncr-068799	Neurospora crassa	92.97	4.00e-69	251.00
IUUC-Opr-070655	Ochotona princeps	86.72	9.00e-65	236.00
IUUC-Ont-072180	Oreochromis niloticus	87.30	5.00e-64	234.00
IUUC-Oan-073196	Ornithorhynchus anatinus	86.72	9.00e-65	236.00
IUUC-Oba-075092	Oryza barthii	90.62	6.00e-67	243.00
IUUC-Obr-076156	Oryza brachyantha	90.70	4.00e-67	244.00
IUUC-Ogl-077471	Oryza glaberrima	90.62	6.00e-67	243.00
IUUC-Ogu-078259	Oryza glumaepatula	90.62	6.00e-67	243.00
IUUC-Oin-079901	Oryza indica	90.62	6.00e-67	243.00
IUUC-Ome-081343	Oryza meridionalis	90.62	6.00e-67	243.00
IUUC-Oni-082301	Oryza nivara	82.35	2.00e-35	139.00
IUUC-Opu-083839	Oryza punctata	64.96	3.00e-37	148.00
IUUC-Oru-085252	Oryza rufipogon	90.62	6.00e-67	243.00
IUUC-Osa-085747	Oryza sativa	79.10	2.00e-52	196.00
IUUC-Ola-086333	Oryzias latipes	87.50	2.00e-65	238.00
IUUC-Olu-087819	Ostreococcus lucimarinus	82.81	2.00e-61	225.00
IUUC-Oga-088027	Otolemur garnettii	86.72	9.00e-65	236.00
IUUC-Oar-090419	Ovis aries	86.72	9.00e-65	236.00
IUUC-Ptr-091593	Pan troglodytes	86.72	9.00e-65	236.00
IUUC-Pan-091806	Papio anubis	84.38	2.00e-61	225.00
IUUC-Psi-093654	Pelodiscus sinensis	86.72	9.00e-65	236.00
IUUC-Ppa-095174	Physcomitrella patens	90.62	2.00e-66	242.00
IUUC-Pfo-096492	Poecilia formosa	87.50	4.00e-65	237.00
IUUC-Pab-098004	Pongo abelii	86.72	9.00e-65	236.00
IUUC-Pop-098929	Populus trichocarpa	91.41	5.00e-67	244.00
IUUC-Ppe-101497	Prunus persica	90.62	2.00e-66	242.00
IUUC-Pva-102945	Pteropus vampyrus	86.72	9.00e-65	236.00
IUUC-Ptt-103804	Puccinia triticina	89.52	2.00e-59	218.00
IUUC-Pte-104101	Pyrenophora teres	90.62	5.00e-68	248.00
IUUC-Pyt-104639	Pyrenophora triticirepentis	90.62	7.00e-68	246.00
IUUC-Rno-105290	Rattus norvegicus	86.72	9.00e-65	236.00
IUUC-Sce-106249	Saccharomyces cerevisiae	92.19	7.00e-69	250.00
IUUC-Sha-106570	Sarcophilus harrisii	86.72	9.00e-65	236.00
IUUC-Sja-107834	Schizosaccharomyces japonicus	93.75	6.00e-70	253.00
IUUC-Spo-108045	Schizosaccharomyces pombe	92.97	4.00e-69	251.00
IUUC-Ssl-108670	Sclerotinia sclerotiorum	93.75	9.00e-70	253.00
IUUC-Sit-110085	Setaria italica	88.19	1.00e-65	240.00
IUUC-Sly-111884	Solanum lycopersicum	91.41	5.00e-67	244.00
IUUC-Stu-112385	Solanum tuberosum	90.91	5.00e-63	231.00
IUUC-Sar-112942	Sorex araneus	87.50	3.00e-65	238.00
IUUC-Sbi-114790	Sorghum bicolor	89.84	2.00e-66	241.00
IUUC-Sre-114908	Sporisorium reilianum	93.75	5.00e-69	250.00
IUUC-Ssc-116417	Sus scrofa	86.72	9.00e-65	236.00
IUUC-Tru-117557	Takifugu rubripes	87.50	4.00e-65	237.00
IUUC-Tni-119715	Tetraodon nigroviridis	87.50	4.00e-65	237.00
IUUC-Tca-121404	Theobroma cacao	90.62	1.00e-66	243.00
IUUC-Tvi-122611	Trichoderma virens	92.19	7.00e-69	250.00
IUUC-Tae-123019	Triticum aestivum	74.52	2.00e-62	229.00
IUUC-Tur-126527	Triticum urartu	91.41	2.00e-67	245.00
IUUC-Tme-127138	Tuber melanosporum	93.60	2.00e-68	249.00
IUUC-Tbe-127851	Tupaia belangeri	96.05	2.00e-39	152.00
IUUC-Ttr-128939	Tursiops truncatus	86.72	9.00e-65	236.00
IUUC-Uma-129619	Ustilago maydis	93.75	5.00e-69	250.00
IUUC-Vda-129775	Verticillium dahliae	92.86	5.00e-68	247.00
IUUC-Vvi-131414	Vitis vinifera	90.62	1.00e-66	242.00
IUUC-Xtr-131921	Xenopus tropicalis	86.72	9.00e-65	236.00
IUUC-Xma-134071	Xiphophorus maculatus	87.50	4.00e-65	237.00
IUUC-Yli-134671	Yarrowia lipolytica	92.97	4.00e-69	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence