iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016769

Ensembl Protein ID

Bra028408.1-P

UniProt Accession

M4EHZ3; M4EHZ3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra028408	Bra028408.1	Bra028408.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.40e-23	83.3	152	193
ULD/UDP/UBQ/UBQ_PIM	1.10e-23	83.9	1	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++q+ +MG   +dr+++++aLraa+nn+e+AveyL++g
   Q: 152  LESTVQQILDMGggsWDRDTVIRALRAAFNNPERAVEYLYSG 193
           5899***********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg..vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk++vktlkg++fe+ev++ +t+++ K++i++  g  +p++qq LI++Gk+LkD+ttL+e+++ d+s+++++++k+k
   Q: 1    MKIFVKTLKGTNFEIEVNPAETISDTKKRIETLHGaqYPAAQQMLIHQGKVLKDETTLEENNVVDNSFIVIMLSKAK 77
           99*********************************99*************************************986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKIFVKTLKG TNFEIEVNPA ETISDTKKRI ETLHGAQYPA AQQMLIHQGK VLKDETTLEE 60
NNVVDNSFIV IMLSKAKVSS SGASTASAPA PSATLAQPAQ TVATPQVATP TASVPEPPSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGATTT TCGTGAAGAC TCTCAAAGGG ACAAACTTCG AGATCGAAGT GAATCCGGCG 60
GAGACGGTAA CCCTAATTCC TGAATTCGAG AATATCAGCG GTCTAATTAC TTTCATTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007830	Ashbya gossypii	34.36	7.00e-17	81.30
IUUC-Bol-015354	Brassica oleracea	92.19	4.00e-156	543.00
IUUC-Cgl-026495	Colletotrichum gloeosporioides	46.94	2.00e-17	83.20
IUUC-Eeu-034721	Erinaceus europaeus	36.71	5.00e-21	95.10
IUUC-Gmo-039080	Gadus morhua	37.23	2.00e-29	122.00
IUUC-Mac-065180	Musa acuminata	72.11	2.00e-96	345.00
IUUC-Ncr-068685	Neurospora crassa	33.59	5.00e-39	154.00
IUUC-Obr-076631	Oryza brachyantha	66.79	3.00e-81	295.00
IUUC-Ppe-101830	Prunus persica	67.81	2.00e-122	431.00
IUUC-Pva-102137	Pteropus vampyrus	36.51	1.00e-32	133.00
IUUC-Sly-111899	Solanum lycopersicum	70.48	1.00e-135	476.00
IUUC-Stu-112054	Solanum tuberosum	68.27	2.00e-133	468.00
IUUC-Sbi-114835	Sorghum bicolor	75.00	2.00e-50	192.00
IUUC-Tca-121661	Theobroma cacao	65.97	8.00e-125	439.00
IUUC-Vda-129946	Verticillium dahliae	51.22	1.00e-22	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence