iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-134791

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative pentatricopeptide repeat-containing protein

Genbank Nucleotide ID

CM000784

Gene Name

ZEAMMB73_Zm00001d011476

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d011476	Zm00001d011476_T001	Zm00001d011476_T001

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/OTU	37.04	3.00e-02	38.10	IUUC-Hsa-045914

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Zea mays

Protein Sequence
(Fasta)

MPAPLILPTV ARELAELLVA LSAARALPKG QQLHGHLLKA GHVPATASSH ALLAHHLLTF 60
YARCALPDLS LRAFLDLPAP PLPAAWSSLI SSFAQNGLAA AAFDTFRRML AAGVPATDRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCGCGC CGCTGATACT ACCCACAGTC GCGCGCGAGC TGGCAGAGCT CCTCGTCGCC 60
CTCTCCGCCG CCCGCGCGCT CCCAAAAGGA CAGCAGCTCC ACGGCCATCT CCTCAAGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat

Interpro

IPR032867--DYW_dom
IPR002885--Pentatricopeptide_repeat
IPR011990--TPR-like_helical_dom

PROSITE

PS51375--PPR

Pfam

PF14432--DYW_deaminase
PF01535--PPR
PF13041--PPR_2

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0016554--P:cytidine to uridine editing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001319	Ailuropoda melanoleuca	35.19	5.00e-03	37.00
IUUC-Atr-002827	Amborella trichopoda	31.58	2.00e-41	163.00
IUUC-Apl-004212	Anas platyrhynchos	31.48	8.80e-02	32.70
IUUC-Aca-005351	Anolis carolinensis	33.33	1.00e-02	35.80
IUUC-Aly-006321	Arabidopsis lyrata	30.17	3.00e-47	182.00
IUUC-Ath-006990	Arabidopsis thaliana	26.56	2.00e-62	233.00
IUUC-Ago-007887	Ashbya gossypii	28.21	6.30e-02	32.30
IUUC-Ame-010733	Astyanax mexicanus	33.33	4.90e-02	33.10
IUUC-Bta-012792	Bos taurus	35.19	5.00e-03	37.00
IUUC-Bdi-014037	Brachypodium distachyon	28.42	1.00e-33	137.00
IUUC-Bol-016246	Brassica oleracea	32.86	2.00e-97	349.00
IUUC-Bra-017212	Brassica rapa	34.73	4.00e-69	256.00
IUUC-Cja-019980	Callithrix jacchus	35.19	5.00e-03	37.00
IUUC-Cfa-020680	Canis familiaris	35.19	5.00e-03	37.00
IUUC-Cpo-022087	Cavia porcellus	33.33	6.00e-03	36.60
IUUC-Csa-023550	Chlorocebus sabaeus	35.19	5.00e-03	37.00
IUUC-Cho-024668	Choloepus hoffmanni	35.19	9.00e-03	36.20
IUUC-Cin-025115	Ciona intestinalis	26.09	5.60e-01	29.60
IUUC-Dno-029986	Dasypus novemcinctus	33.33	1.20e-02	35.40
IUUC-Dor-030555	Dipodomys ordii	35.19	4.00e-03	37.40
IUUC-Ete-033114	Echinops telfairi	35.19	6.00e-03	36.60
IUUC-Eca-034153	Equus caballus	35.19	6.00e-03	36.60
IUUC-Fca-035911	Felis catus	35.19	5.00e-03	37.00
IUUC-Fal-037214	Ficedula albicollis	33.33	5.00e-03	36.60
IUUC-Gmo-039664	Gadus morhua	35.19	3.00e-02	33.90
IUUC-Gga-040302	Gallus gallus	31.48	3.00e-02	34.30
IUUC-Gac-041575	Gasterosteus aculeatus	33.33	2.00e-01	31.60
IUUC-Ggo-044624	Gorilla gorilla	37.04	2.00e-03	38.50
IUUC-Hsa-045914	Homo sapiens	37.04	2.00e-03	38.50
IUUC-Itr-048269	Ictidomys tridecemlineatus	35.19	5.00e-03	37.00
IUUC-Lch-050083	Latimeria chalumnae	35.19	3.90e-02	33.90
IUUC-Lpe-050946	Leersia perrieri	36.12	5.00e-97	348.00
IUUC-Loc-052258	Lepisosteus oculatus	24.63	1.20e+00	28.90
IUUC-Laf-054209	Loxodonta africana	35.19	4.00e-03	37.00
IUUC-Mcc-055670	Macaca mulatta	35.19	5.00e-03	37.00
IUUC-Mtr-058695	Medicago truncatula	35.95	5.00e-114	404.00
IUUC-Mga-059426	Meleagris gallopavo	31.48	5.10e-02	33.50
IUUC-Mmr-060911	Microcebus murinus	33.33	1.20e-02	35.40
IUUC-Mdo-061844	Monodelphis domestica	33.33	6.20e-01	30.00
IUUC-Mmu-064417	Mus musculus	33.33	1.00e-02	35.80
IUUC-Mpu-066037	Mustela putorius furo	35.19	5.00e-03	37.00
IUUC-Mlu-067718	Myotis lucifugus	33.33	2.90e-02	34.30
IUUC-Nle-069487	Nomascus leucogenys	37.04	2.00e-03	38.50
IUUC-Ont-071417	Oreochromis niloticus	31.48	5.20e-02	33.50
IUUC-Oan-072968	Ornithorhynchus anatinus	35.19	5.80e-01	30.00
IUUC-Ocu-073928	Oryctolagus cuniculus	35.19	4.00e-03	37.00
IUUC-Oba-075207	Oryza barthii	33.64	2.00e-62	233.00
IUUC-Ome-081873	Oryza meridionalis	38.33	2.00e-63	236.00
IUUC-Ola-086984	Oryzias latipes	31.48	2.20e-02	34.70
IUUC-Oga-088277	Otolemur garnettii	33.33	1.30e-02	35.40
IUUC-Oar-089250	Ovis aries	35.19	4.00e-03	37.00
IUUC-Ptr-090602	Pan troglodytes	37.04	2.00e-03	38.50
IUUC-Pan-092319	Papio anubis	35.19	5.00e-03	37.00
IUUC-Psi-093378	Pelodiscus sinensis	33.33	1.50e-02	35.40
IUUC-Pfo-096606	Poecilia formosa	33.33	1.90e-02	35.00
IUUC-Pab-098367	Pongo abelii	37.04	2.00e-03	38.50
IUUC-Pca-100395	Procavia capensis	31.48	1.10e-01	32.30
IUUC-Ppe-101554	Prunus persica	30.25	6.00e-61	228.00
IUUC-Pva-103143	Pteropus vampyrus	35.19	6.00e-03	36.60
IUUC-Rno-104865	Rattus norvegicus	33.33	1.10e-02	35.80
IUUC-Sha-106910	Sarcophilus harrisii	37.04	2.60e-01	31.20
IUUC-Smo-109647	Selaginella moellendorffii	32.12	5.00e-87	315.00
IUUC-Ssc-115468	Sus scrofa	35.19	6.00e-03	36.20
IUUC-Tgu-116788	Taeniopygia guttata	31.48	1.70e-02	35.00
IUUC-Tru-118008	Takifugu rubripes	35.19	1.40e-02	35.40
IUUC-Tsy-119457	Tarsius syrichta	35.19	5.00e-03	37.00
IUUC-Tni-120146	Tetraodon nigroviridis	33.33	3.30e-02	33.90
IUUC-Tca-121040	Theobroma cacao	32.99	2.00e-65	243.00
IUUC-Tur-126385	Triticum urartu	38.14	1.00e-104	374.00
IUUC-Tbe-128060	Tupaia belangeri	37.04	2.00e-03	38.10
IUUC-Ttr-128257	Tursiops truncatus	35.19	9.00e-03	36.20
IUUC-Vpa-130661	Vicugna pacos	35.19	6.00e-03	36.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence