iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057962

Ensembl Protein ID

KEH33653

UniProt Accession

A0A072UX44; A0A072UX44_MEDTR

Genbank Protein ID

KEH33653.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g449990

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g449990	KEH33653	KEH33653

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-26	91.0	525	558
UBD/Beta-Prp	1.90e-47	163.3	262	482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           gH++ v+c+++   + ++l+s+sdD t+++W l+
   Q: 525  GHSGAVNCVSWnpaNPHMLASASDDRTVRIWGLK 558
           8***********963399*************986 PP

UBD/Beta-Prp

   S: 44   llrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvn 141
           +l+ l  h++ev+ v+fs+dgk+l+t+s+Drt+ +w+++     ++ h+l+gh++sv s+s+sp+g+ l++ +  + +r wd++tg+cl+  +++ +g+++
   Q: 262  TLQILDAHDDEVWFVQFSHDGKYLATASNDRTAIIWEVDtndGLSMKHKLSGHQKSVSSVSWSPNGQELLTCGVEEAVRRWDVSTGKCLQVYEKNGSGLIS 362
           48999*******************************888223345779999***************************************9999999**** PP
   S: 142  cvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgss 242
           c+ +++ g+++ sG  D+ + +W l  gk ++ ++g++t ++  l+++ +g++++s+ + + + l++ +t+  v+++++ +++++s  +s+++ +l++   
   Q: 363  CAWFPC-GKYILSGLSDKSICMWEL-DGKEVESWKGQKTLKISDLEITGDGEHILSICKENAILLFNKETK--VERFIEEDQTITSFSLSKDSRFLLVNLL 459
           *99999.*****************9.99***************************************9999..9****************9999999999* PP
   S: 243  DgsiriWdlrsg.dllktlqlhn 264
            + i +W+++ + +l+++++ h+
   Q: 460  NQEIHLWNIEGDlKLVGKYKSHR 482
           *******9986535555555555 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGGVEDEEPA LKRTKLLSKG LNSLSNGSSS VERVVGSSSE LMARPLSSEG DNEVVGSKGI 60
IKKGEFVRII TKALYSLGYK KTGENLEEES GIPLNSSVVN VFMQQVLDGD WEESVSTLNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACATCCAC ACCATCCAAT CCCTTTCTCC TGCTTCGGTA ACTACACAAA TCAGTTTCAG 60
GCCAAAGAAA ATAAGAAAGA AAGAGAGAAA TTGGCGGTGC TCTACCACCG ATCGCTCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00320--WD40

KEGG

mtr:MTR_3g449990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007896	Ashbya gossypii	23.35	3.00e-28	119.00
IUUC-Acl-008259	Aspergillus clavatus	36.61	4.00e-88	318.00
IUUC-Afl-008669	Aspergillus flavus	36.01	5.00e-83	301.00
IUUC-Afu-008972	Aspergillus fumigatus	39.31	7.00e-68	250.00
IUUC-Aor-010221	Aspergillus oryzae	37.26	2.00e-86	313.00
IUUC-Ate-010262	Aspergillus terreus	37.62	4.00e-88	318.00
IUUC-Ame-011448	Astyanax mexicanus	38.40	2.00e-84	306.00
IUUC-Bol-015143	Brassica oleracea	59.56	0.00e+00	667.00
IUUC-Csa-023815	Chlorocebus sabaeus	36.50	6.00e-62	231.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	34.70	1.00e-70	260.00
IUUC-Cne-026805	Cryptococcus neoformans	25.08	5.00e-35	142.00
IUUC-Cme-027218	Cyanidioschyzon merolae	27.17	4.00e-60	225.00
IUUC-Dse-031569	Dothistroma septosporum	30.33	2.00e-64	239.00
IUUC-Ete-032986	Echinops telfairi	35.59	1.00e-27	116.00
IUUC-Fca-036556	Felis catus	37.43	2.00e-72	266.00
IUUC-Gmo-038610	Gadus morhua	37.10	3.00e-82	298.00
IUUC-Ggr-039738	Gaeumannomyces graminis	33.01	1.00e-74	273.00
IUUC-Gma-042660	Glycine max	84.46	0.00e+00	939.00
IUUC-Kpa-049141	Komagataella pastoris	30.12	2.00e-63	236.00
IUUC-Mor-056939	Magnaporthe oryzae	35.41	6.00e-80	291.00
IUUC-Mpo-057600	Magnaporthe poae	33.07	1.00e-72	267.00
IUUC-Mvi-060274	Microbotryum violaceum	35.32	2.00e-86	312.00
IUUC-Mac-065563	Musa acuminata	63.13	0.00e+00	736.00
IUUC-Ncr-068832	Neurospora crassa	34.13	5.00e-73	268.00
IUUC-Ont-071547	Oreochromis niloticus	38.40	1.00e-83	303.00
IUUC-Oan-073045	Ornithorhynchus anatinus	36.92	6.00e-73	268.00
IUUC-Ola-086670	Oryzias latipes	36.97	6.00e-84	304.00
IUUC-Ppa-095307	Physcomitrella patens	53.40	3.00e-161	561.00
IUUC-Pfo-096394	Poecilia formosa	38.60	1.00e-84	306.00
IUUC-Pca-100574	Procavia capensis	43.94	3.00e-41	162.00
IUUC-Pgr-103411	Puccinia graminis	29.58	1.00e-31	131.00
IUUC-Smo-109054	Selaginella moellendorffii	53.87	2.00e-166	578.00
IUUC-Stu-112726	Solanum tuberosum	59.86	0.00e+00	696.00
IUUC-Tsy-119284	Tarsius syrichta	35.97	3.00e-64	238.00
IUUC-Tni-119720	Tetraodon nigroviridis	37.28	1.00e-81	296.00
IUUC-Ttr-129184	Tursiops truncatus	37.07	3.00e-74	271.00
IUUC-Vda-129770	Verticillium dahliae	33.46	1.00e-68	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence