iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126644

Ensembl Protein ID

TRIUR3_08167-P1

UniProt Accession

M7YCM0; M7YCM0_TRIUA

Genbank Protein ID

EMS47983.1

Protein Name

E3 ubiquitin-protein ligase RMA3

Genbank Nucleotide ID

KD253430

Gene Name

TRIUR3_08167

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_08167	TRIUR3_08167-T1	TRIUR3_08167-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.80e-09	36.8	33	84
E3 activity/RING/U-box	5.50e-06	27.1	30	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.......pglknssskefrCPlCr 46
           C iCl+   d p+v+ CgH+++  C++ w           ns+s +++CP+C+
   Q: 33   CNICLDFAAD-PVVTLCGHLYCWPCIYEWlrpsvvsASGANSTSARQQCPVCK 84
           99****9999.999**********************999999**********7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl......asggk......tcPvtrqplteedlvPn 58
            f C I l+   dPvv+ +G+ y   +I +wl      asg +      +cPv+++ l+ ++lvP 
   Q: 30   SFDCNICLDFAADPVVTLCGHLYCWPCIYEWLrpsvvsASGANstsarqQCPVCKAALSADSLVPL 95
           599*****************************98888734433777888***************96 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MTNQPPVSDN KPMKNISGEM PAAATAGSGS FDCNICLDFA ADPVVTLCGH LYCWPCIYEW 60
LRPSVVSASG ANSTSARQQC PVCKAALSAD SLVPLYGRGG SSKKSLDGMA IPRRPTVHRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAAACC AACCTCCAGT GTCCGATAAC AAGCCAATGA AGAACATCAG TGGGGAGATG 60
CCTGCAGCCG CGACCGCTGG AAGCGGCTCC TTTGACTGCA ACATCTGCCT CGACTTCGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002652--Importin-a_IBB
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51214--IBB
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0016874--F:ligase activity
GO:0008565--F:protein transporter activity
GO:0008270--F:zinc ion binding
GO:0006606--P:protein import into nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000767	Aegilops tauschii	96.92	1.00e-120	424.00
IUUC-Aly-006090	Arabidopsis lyrata	38.98	4.00e-28	117.00
IUUC-Ath-006841	Arabidopsis thaliana	37.13	2.00e-28	118.00
IUUC-Ago-007781	Ashbya gossypii	36.84	2.00e-08	52.40
IUUC-Afl-008526	Aspergillus flavus	36.49	8.00e-10	55.80
IUUC-Bdi-014949	Brachypodium distachyon	79.74	4.00e-95	339.00
IUUC-Bol-015969	Brassica oleracea	54.37	8.00e-27	112.00
IUUC-Bra-016747	Brassica rapa	55.45	5.00e-27	113.00
IUUC-Cho-024416	Choloepus hoffmanni	45.16	5.00e-09	54.70
IUUC-Cgl-026468	Colletotrichum gloeosporioides	27.37	1.00e-10	58.50
IUUC-Gma-043553	Glycine max	36.91	5.00e-30	123.00
IUUC-Hvu-047276	Hordeum vulgare	89.91	2.00e-115	407.00
IUUC-Lpe-051528	Leersia perrieri	73.57	1.00e-88	319.00
IUUC-Mtr-058147	Medicago truncatula	36.67	6.00e-29	119.00
IUUC-Mvi-060316	Microbotryum violaceum	48.61	2.00e-14	71.20
IUUC-Mac-065357	Musa acuminata	47.77	1.00e-46	178.00
IUUC-Oba-075301	Oryza barthii	66.99	5.00e-28	117.00
IUUC-Obr-076866	Oryza brachyantha	70.93	9.00e-83	298.00
IUUC-Ogl-077734	Oryza glaberrima	69.60	9.00e-82	295.00
IUUC-Ogu-078280	Oryza glumaepatula	69.60	4.00e-82	296.00
IUUC-Oin-079906	Oryza indica	69.60	4.00e-82	296.00
IUUC-Olo-081070	Oryza longistaminata	69.16	9.00e-82	295.00
IUUC-Ome-081915	Oryza meridionalis	69.16	1.00e-81	294.00
IUUC-Oni-082950	Oryza nivara	69.60	4.00e-82	296.00
IUUC-Opu-083549	Oryza punctata	71.81	2.00e-86	311.00
IUUC-Oru-085110	Oryza rufipogon	66.99	5.00e-28	117.00
IUUC-Osa-085904	Oryza sativa	69.60	4.00e-82	296.00
IUUC-Pop-099944	Populus trichocarpa	39.35	3.00e-31	127.00
IUUC-Ppe-101989	Prunus persica	37.45	2.00e-27	115.00
IUUC-Pyt-104640	Pyrenophora triticirepentis	35.63	2.00e-10	58.90
IUUC-Sit-110543	Setaria italica	68.16	2.00e-89	320.00
IUUC-Sly-111236	Solanum lycopersicum	55.32	6.00e-27	113.00
IUUC-Stu-112665	Solanum tuberosum	36.84	2.00e-28	117.00
IUUC-Sar-113096	Sorex araneus	31.25	1.00e-08	52.80
IUUC-Sbi-114178	Sorghum bicolor	67.70	1.00e-89	321.00
IUUC-Tca-121702	Theobroma cacao	37.80	1.00e-30	125.00
IUUC-Tae-124302	Triticum aestivum	99.56	8.00e-126	441.00
IUUC-Vvi-131123	Vitis vinifera	41.71	7.00e-30	123.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence