iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043592

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846

Gene Name

LOC100797283; GLYMA_13G092000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G01470	GLYMA13G01470.1	GLYMA13G01470.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.80e-06	28.4	130	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d +++lp C H+fh +C+  w         + +CPlCr
   Q: 130  CAVCLCEFepEDKLRLLPkCSHAFHMECIDTW------LLSHSTCPLCR 172
           ********88666*******************......89999*****8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGFRSDVFVS PPEQPPYFLS EPTPPFPPTV RSDSFSFNDR ALKVSPSILL IIIILAIVFF 60
ISGLLHLLVR FLWRPQTREP DELDNVTALQ GQLQQLFHLH DAGVDQSFID TLPVFLYKAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAACAAGAA GCAACCGCTA GTTATGCCGG AGGGTGATTT TTTGTTCAAA GGTCCAAGCT 60
AATCTCATTA AATTTCACAC GGTGACAGAT TTGTGTGTCA TTATCATTCA AAAATTGTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

gmx:100797283

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000746	Aegilops tauschii	37.33	1.00e-29	123.00
IUUC-Atr-002500	Amborella trichopoda	49.89	1.00e-85	310.00
IUUC-Aly-006179	Arabidopsis lyrata	48.58	5.00e-78	285.00
IUUC-Ath-006858	Arabidopsis thaliana	48.57	7.00e-82	297.00
IUUC-Ago-007872	Ashbya gossypii	33.33	7.00e-12	63.20
IUUC-Bol-016067	Brassica oleracea	46.89	5.00e-77	281.00
IUUC-Bra-017063	Brassica rapa	48.00	8.00e-76	277.00
IUUC-Hvu-047745	Hordeum vulgare	39.39	2.00e-49	189.00
IUUC-Lpe-051680	Leersia perrieri	41.88	1.00e-66	247.00
IUUC-Mtr-058782	Medicago truncatula	71.49	1.00e-147	516.00
IUUC-Mac-064639	Musa acuminata	46.79	2.00e-84	306.00
IUUC-Oba-075403	Oryza barthii	43.83	2.00e-69	256.00
IUUC-Obr-076503	Oryza brachyantha	43.18	4.00e-64	238.00
IUUC-Ogl-077574	Oryza glaberrima	43.30	2.00e-69	256.00
IUUC-Ogu-077986	Oryza glumaepatula	43.09	2.00e-69	256.00
IUUC-Olo-080854	Oryza longistaminata	67.52	3.00e-44	172.00
IUUC-Ome-081627	Oryza meridionalis	43.85	4.00e-67	248.00
IUUC-Oni-082260	Oryza nivara	43.30	1.00e-69	257.00
IUUC-Opu-083578	Oryza punctata	43.90	6.00e-68	251.00
IUUC-Oru-084794	Oryza rufipogon	43.30	2.00e-69	256.00
IUUC-Osa-085348	Oryza sativa	43.30	2.00e-69	256.00
IUUC-Ppa-095806	Physcomitrella patens	68.10	4.00e-40	159.00
IUUC-Pop-099449	Populus trichocarpa	60.38	2.00e-133	469.00
IUUC-Ppe-101557	Prunus persica	66.94	3.00e-136	478.00
IUUC-Sit-109852	Setaria italica	41.94	5.00e-63	235.00
IUUC-Sly-111133	Solanum lycopersicum	51.39	3.00e-102	365.00
IUUC-Tca-121042	Theobroma cacao	66.46	6.00e-127	447.00
IUUC-Tae-123826	Triticum aestivum	40.72	6.00e-52	197.00
IUUC-Tur-126047	Triticum urartu	51.17	2.00e-52	199.00
IUUC-Vvi-130906	Vitis vinifera	64.65	3.00e-129	455.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence