iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109257

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377568

Gene Name

SELMODRAFT_80645

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_80645	EFJ35160	EFJ35160

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-58	192.9	387	426
UBD/Beta-Prp	1.60e-111	373.0	401	653

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWDlrtgvl 35
           gHtd v cl+     ++   l+sG+ D+t ++WD+++g++
   Q: 387  GHTDIVLCLDTclssQGkSVLASGGKDHTARLWDVTSGKC 426
           8*******9755786445679*****************98 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdls............tgkcvhtlkghedsvlslsfspsg 106
           s++ks+la+g++d+t ++wdvt+gk+++   gh+a+v a+ fs+++  +l+tgs+Dr ik wd++            + +c+++  +h++++ sls+ p++
   Q: 401  SQGKSVLASGGKDHTARLWDVTSGKCFAMCTGHSAAVGAIAFSKKKRsFLLTGSRDRSIKFWDFQfviddnqqdrvaKLSCIRSAAAHDKDINSLSVAPND 501
           699****************************************99878**************9999999******************************** PP
   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklw 207
           + l sGs+d t+r+w+l++ +    tl+gh++ v++v+++p ++++ ++s D+t+r+W l+ g++l+t++g ht sv   sf s g++++s + dg vklw
   Q: 502  SLLCSGSQDGTARIWKLPELTLAT-TLKGHKRGVWSVEFSPIDQCVLTSSGDKTIRIWALSDGSCLKTFEG-HTASVLRASFLSRGTQIISSGADGLVKLW 600
           **********************99.*********************************************9.***************************** PP
   S: 208  dlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW.dlrsgdllkt 259
            ++++ec++t+  h+d ++ +++ +n+e +++g+ D  + +W d++ +d   +
   Q: 601  TIKSNECINTFDQHNDKIWALAVNSNNESFATGGGDALVTLWeDCTASDEEEA 653
           ******************************************99998876655 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAPLGYKKNF RATPALQLFY TGGPLRLAPD ASFLACACND EVKIVDIATG TIRKSLAGDS 60
EAITALAISP DGNTLFAASR SLQVRIWDLA TGTLCRSWKA HDGSVTDMDV SMSGLLATAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCCGT TAGGATACAA GAAAAATTTC CGGGCGACGC CGGCATTGCA GCTCTTCTAC 60
ACGGGAGGGC CGCTGCGTCT CGCGCCGGAT GCCTCGTTCC TTGCCTGCGC TTGCAACGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

smo:SELMODRAFT_80645

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	49.57	0.00e+00	770.00
IUUC-Aml-002376	Ailuropoda melanoleuca	39.65	1.00e-152	533.00
IUUC-Atr-002486	Amborella trichopoda	54.14	0.00e+00	906.00
IUUC-Apl-003519	Anas platyrhynchos	32.29	8.00e-98	350.00
IUUC-Aca-004363	Anolis carolinensis	34.35	6.00e-73	267.00
IUUC-Aly-006152	Arabidopsis lyrata	51.10	0.00e+00	835.00
IUUC-Ath-006966	Arabidopsis thaliana	50.79	0.00e+00	832.00
IUUC-Ago-007746	Ashbya gossypii	32.08	4.00e-104	371.00
IUUC-Acl-008009	Aspergillus clavatus	31.10	6.00e-111	394.00
IUUC-Afl-008681	Aspergillus flavus	32.25	4.00e-104	372.00
IUUC-Afu-008798	Aspergillus fumigatus	30.52	4.00e-106	379.00
IUUC-Ani-009278	Aspergillus nidulans	31.29	1.00e-116	413.00
IUUC-Ang-009640	Aspergillus niger	32.24	2.00e-116	413.00
IUUC-Aor-010160	Aspergillus oryzae	32.25	2.00e-104	372.00
IUUC-Ate-010320	Aspergillus terreus	31.25	2.00e-114	405.00
IUUC-Ame-010930	Astyanax mexicanus	39.90	1.00e-37	148.00
IUUC-Bgr-012054	Blumeria graminis	29.65	8.00e-100	357.00
IUUC-Bta-012611	Bos taurus	39.58	4.00e-147	514.00
IUUC-Bci-013797	Botrytis cinerea	31.81	1.00e-115	410.00
IUUC-Bdi-014384	Brachypodium distachyon	53.99	0.00e+00	859.00
IUUC-Bol-015097	Brassica oleracea	49.82	0.00e+00	823.00
IUUC-Bra-017798	Brassica rapa	50.55	0.00e+00	824.00
IUUC-Cel-018664	Caenorhabditis elegans	29.44	3.00e-100	358.00
IUUC-Cfa-021040	Canis familiaris	39.41	1.00e-153	536.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	63.97	1.00e-53	200.00
IUUC-Csa-024205	Chlorocebus sabaeus	39.33	3.00e-155	541.00
IUUC-Cin-025560	Ciona intestinalis	34.83	1.00e-143	503.00
IUUC-Cgl-026481	Colletotrichum gloeosporioides	32.42	4.00e-117	415.00
IUUC-Cne-027082	Cryptococcus neoformans	30.92	2.00e-120	426.00
IUUC-Cme-027159	Cyanidioschyzon merolae	26.13	7.00e-40	159.00
IUUC-Dre-028138	Danio rerio	36.82	1.00e-147	516.00
IUUC-Dno-029914	Dasypus novemcinctus	33.19	9.00e-80	290.00
IUUC-Dor-030685	Dipodomys ordii	40.36	3.00e-99	355.00
IUUC-Dse-031429	Dothistroma septosporum	29.95	1.00e-106	380.00
IUUC-Dme-031995	Drosophila melanogaster	29.33	5.00e-94	338.00
IUUC-Ete-033086	Echinops telfairi	40.64	4.00e-88	318.00
IUUC-Eca-034354	Equus caballus	38.71	2.00e-144	506.00
IUUC-Eeu-034832	Erinaceus europaeus	39.45	3.00e-89	322.00
IUUC-Fca-036136	Felis catus	35.99	2.00e-124	439.00
IUUC-Fal-036859	Ficedula albicollis	36.39	4.00e-145	508.00
IUUC-Ggr-039820	Gaeumannomyces graminis	30.79	5.00e-105	375.00
IUUC-Gma-044026	Glycine max	53.34	0.00e+00	885.00
IUUC-Ggo-044693	Gorilla gorilla	39.07	2.00e-154	538.00
IUUC-Hsa-046048	Homo sapiens	39.07	2.00e-154	538.00
IUUC-Hvu-047608	Hordeum vulgare	53.31	0.00e+00	852.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	39.13	2.00e-159	555.00
IUUC-Kpa-049209	Komagataella pastoris	31.53	1.00e-116	413.00
IUUC-Lch-050085	Latimeria chalumnae	36.00	4.00e-133	468.00
IUUC-Lpe-050945	Leersia perrieri	53.01	0.00e+00	849.00
IUUC-Mcc-055861	Macaca mulatta	39.21	2.00e-153	535.00
IUUC-Meu-056820	Macropus eugenii	34.21	1.00e-107	383.00
IUUC-Mor-057234	Magnaporthe oryzae	30.64	4.00e-100	358.00
IUUC-Mpo-057456	Magnaporthe poae	31.77	3.00e-86	311.00
IUUC-Mtr-058122	Medicago truncatula	53.34	0.00e+00	887.00
IUUC-Mla-058980	Melampsora laricipopulina	29.35	5.00e-87	315.00
IUUC-Mvi-060338	Microbotryum violaceum	35.78	4.00e-146	511.00
IUUC-Mmr-060762	Microcebus murinus	38.20	3.00e-147	515.00
IUUC-Mdo-061975	Monodelphis domestica	38.15	3.00e-152	531.00
IUUC-Mmu-064038	Mus musculus	39.08	4.00e-149	521.00
IUUC-Mac-065189	Musa acuminata	51.27	0.00e+00	873.00
IUUC-Mpu-066526	Mustela putorius furo	39.53	4.00e-148	518.00
IUUC-Mlu-067716	Myotis lucifugus	38.83	1.00e-159	556.00
IUUC-Nfi-068474	Neosartorya fischeri	31.01	8.00e-111	394.00
IUUC-Ncr-068826	Neurospora crassa	29.58	9.00e-104	370.00
IUUC-Nle-069832	Nomascus leucogenys	39.23	4.00e-155	541.00
IUUC-Opr-071183	Ochotona princeps	38.75	1.00e-146	513.00
IUUC-Ont-072371	Oreochromis niloticus	37.93	5.00e-159	554.00
IUUC-Oba-075963	Oryza barthii	52.50	0.00e+00	859.00
IUUC-Obr-076173	Oryza brachyantha	53.31	0.00e+00	847.00
IUUC-Ogl-077692	Oryza glaberrima	52.38	0.00e+00	857.00
IUUC-Ogu-078965	Oryza glumaepatula	52.50	0.00e+00	859.00
IUUC-Oin-079708	Oryza indica	52.62	0.00e+00	859.00
IUUC-Olo-080679	Oryza longistaminata	52.30	0.00e+00	857.00
IUUC-Oni-082960	Oryza nivara	52.50	0.00e+00	858.00
IUUC-Opu-083282	Oryza punctata	52.26	0.00e+00	844.00
IUUC-Oru-085224	Oryza rufipogon	52.62	0.00e+00	860.00
IUUC-Osa-085320	Oryza sativa	52.62	0.00e+00	860.00
IUUC-Oga-088458	Otolemur garnettii	38.09	3.00e-154	538.00
IUUC-Oar-090032	Ovis aries	36.64	5.00e-110	390.00
IUUC-Ptr-090749	Pan troglodytes	39.32	3.00e-154	538.00
IUUC-Psi-093200	Pelodiscus sinensis	35.53	4.00e-149	521.00
IUUC-Pma-094165	Petromyzon marinus	35.80	6.00e-105	374.00
IUUC-Pno-095048	Phaeosphaeria nodorum	33.03	2.00e-88	319.00
IUUC-Ppa-095336	Physcomitrella patens	60.93	0.00e+00	1005.00
IUUC-Pfo-096132	Poecilia formosa	39.11	3.00e-159	555.00
IUUC-Pab-097855	Pongo abelii	39.60	3.00e-156	545.00
IUUC-Pop-099434	Populus trichocarpa	50.35	0.00e+00	833.00
IUUC-Pca-100232	Procavia capensis	38.70	3.00e-56	213.00
IUUC-Ppe-101665	Prunus persica	52.89	0.00e+00	876.00
IUUC-Pva-102178	Pteropus vampyrus	38.78	5.00e-156	544.00
IUUC-Pgr-103288	Puccinia graminis	30.06	1.00e-81	296.00
IUUC-Ptt-103808	Puccinia triticina	30.77	2.00e-82	299.00
IUUC-Pte-104205	Pyrenophora teres	31.71	2.00e-107	382.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	30.06	1.00e-97	350.00
IUUC-Rno-105617	Rattus norvegicus	39.33	7.00e-152	530.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	34.11	3.00e-128	451.00
IUUC-Spo-108361	Schizosaccharomyces pombe	29.62	5.00e-96	344.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	32.02	1.00e-118	419.00
IUUC-Sit-110258	Setaria italica	53.42	0.00e+00	879.00
IUUC-Sly-111521	Solanum lycopersicum	54.00	0.00e+00	898.00
IUUC-Sbi-114768	Sorghum bicolor	52.99	0.00e+00	872.00
IUUC-Sre-115159	Sporisorium reilianum	32.35	1.00e-97	350.00
IUUC-Ssc-116342	Sus scrofa	32.26	1.00e-78	287.00
IUUC-Tru-118024	Takifugu rubripes	37.96	1.00e-156	546.00
IUUC-Tca-121248	Theobroma cacao	52.75	0.00e+00	849.00
IUUC-Tre-122079	Trichoderma reesei	30.34	9.00e-109	387.00
IUUC-Tvi-122554	Trichoderma virens	29.53	3.00e-109	389.00
IUUC-Tae-124473	Triticum aestivum	53.37	0.00e+00	860.00
IUUC-Tme-126942	Tuber melanosporum	33.95	2.00e-125	442.00
IUUC-Ttr-128964	Tursiops truncatus	37.83	4.00e-149	521.00
IUUC-Uma-129473	Ustilago maydis	31.90	4.00e-107	382.00
IUUC-Vda-129749	Verticillium dahliae	31.44	1.00e-102	366.00
IUUC-Vvi-131511	Vitis vinifera	55.92	0.00e+00	899.00
IUUC-Xtr-132816	Xenopus tropicalis	33.45	1.00e-122	433.00
IUUC-Xma-133672	Xiphophorus maculatus	38.65	4.00e-160	557.00
IUUC-Yli-134602	Yarrowia lipolytica	36.41	7.00e-148	516.00
IUUC-Zma-135559	Zea mays	50.66	0.00e+00	838.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence