iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114418

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G188600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g023700	Sb04g023700.1	Sb04g023700.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	9.60e-99	331.5	67	404

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaqE 94
           +Gl+N+gNtCY+NSvLQ+L+ + ++re+lle + +k ++   ++ +++ll++l++lf+++   k+k+++++p++++++++k++e f+gy++qDa+E
   Q: 67   FGLENFGNTCYCNSVLQALYYCAPFREQLLE-YYSKNRNL--EDAEENLLTCLADLFSQISasKKKTGVIAPKRFIQMVRKLNEYFRGYMHQDAHE 159
           6******************************.55554444..6899**************98899999**************************** PP
   S: 95   flaflldqleeelkkeknkpkeeeeeedkselsde...aeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkesl 187
           fl+fll+++ + l+k ++++ +++ ++++ e+ ++    +e  k+   +++++ Fqg+l+++++cl c++++ ++e+f+dls+++++++     sl
   Q: 160  FLNFLLNEIVDILEK-ESSSAKDSPGTTSPEKVSNgatVDEVRKEPLVTWVHKSFQGTLTNETRCLMCETITAKDETFFDLSVDIEQNS-----SL 249
           *************66.33333333333333322222223344444444*****************************************.....9* PP
   S: 188  qdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiav 283
           ++cL++f+++e+l+ ++k++c+kc+++qeaek++k+kk+P++L++hLkRf+f e+ ++++k++ +v +pleL+ls+  ++   ++  +++Y+L+av
   Q: 250  TSCLKNFFSTETLNADDKFFCDKCCSLQEAEKRMKIKKVPQTLVIHLKRFKFIEQLNRNKKLSYRVVYPLELKLSSSSSD---AV-ADCEYSLFAV 341
           **************************************************************************965555...33.499******* PP
   S: 284  vvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetg.........staYvlfYkr 337
           vvH G ++++GHYva +k+ +++Wl fdD++V+ ++e++ +++ g         + +Y+lfY+r
   Q: 342  VVHLGsGPNQGHYVAKIKS-HDHWLSFDDDNVEMIPESTLQTFYGssreysgntDHGYILFYER 404
           *******************.888*******************999*****************98 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAKLARSPTA SPPAAAADRH RSAAGSGLRS LASAASGWFD RWAVMGSGLS KLERAFGDQF 60
PEGERYFGLE NFGNTCYCNS VLQALYYCAP FREQLLEYYS KNRNLEDAEE NLLTCLADLF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGAAGCAA ACCTTCTCTC ATCAGGGGAA AAAAAACCAT CGCGACTTCG CGACCCAGCA 60
GTGACATCCT CAAGCAGTGA AGCACCCTCC TTCGGTCCAT CCCACCCTCC ATCTCGATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g023700

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ago-007871	Ashbya gossypii	37.54	1.00e-47	184.00
IUUC-Bdi-014979	Brachypodium distachyon	81.62	0.00e+00	635.00
IUUC-Olo-080880	Oryza longistaminata	74.60	2.00e-170	590.00
IUUC-Sit-110130	Setaria italica	93.18	0.00e+00	738.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence