iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111606

Ensembl Protein ID

Solyc12g005020.1.1

UniProt Accession

K4DB40; K4DB40_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc12g005020.1	Solyc12g005020.1.1	Solyc12g005020.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.30e-09	37.5	178	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+d+kdg   +vlp C+H fh++C+  w        ++ +CP+Cr
   Q: 178  CAICLQDLKDGesARVLPsCKHSFHTQCIDEW------LTRHGSCPICR 220
           ********88777888888*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MTNHLFTCIY TLLVKSKECI FTWVFFGFSS GLLLMVTKNA IWALFMCILA LGGATVGIVT 60
GAIKGQTTET GLLRGAGVGA VTGAVTTVQL VELILNGESF SKVALVCSLV NGKVFMEWVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAAACC ATTTGTTTAC TTGCATTTAT ACTTTACTGG TAAAGAGTAA AGAGTGTATT 60
TTCACTTGGG TTTTCTTCGG CTTTTCTTCT GGACTCTTGT TGATGGTCAC AAAGAATGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101256944

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000628	Aegilops tauschii	35.94	5.00e-23	100.00
IUUC-Atr-002941	Amborella trichopoda	38.60	6.00e-31	126.00
IUUC-Aly-005906	Arabidopsis lyrata	45.91	8.00e-36	142.00
IUUC-Ath-006813	Arabidopsis thaliana	44.86	7.00e-37	146.00
IUUC-Bdi-014157	Brachypodium distachyon	39.18	2.00e-29	121.00
IUUC-Bol-015818	Brassica oleracea	38.05	3.00e-38	150.00
IUUC-Bra-017036	Brassica rapa	38.54	6.00e-38	149.00
IUUC-Gma-042887	Glycine max	50.00	5.00e-49	186.00
IUUC-Hvu-047681	Hordeum vulgare	33.97	1.00e-23	102.00
IUUC-Lpe-050990	Leersia perrieri	39.69	7.00e-32	129.00
IUUC-Mtr-058031	Medicago truncatula	47.85	4.00e-33	133.00
IUUC-Mmu-063103	Mus musculus	34.85	3.00e-14	73.60
IUUC-Mac-065535	Musa acuminata	49.76	1.00e-48	187.00
IUUC-Oba-075172	Oryza barthii	39.38	3.00e-31	127.00
IUUC-Obr-076253	Oryza brachyantha	40.44	5.00e-30	123.00
IUUC-Ogl-077372	Oryza glaberrima	39.38	3.00e-31	127.00
IUUC-Ogu-078405	Oryza glumaepatula	39.38	2.00e-31	128.00
IUUC-Oin-079516	Oryza indica	39.38	3.00e-31	127.00
IUUC-Olo-081046	Oryza longistaminata	39.78	6.00e-29	120.00
IUUC-Ome-081409	Oryza meridionalis	40.00	5.00e-31	127.00
IUUC-Oni-082998	Oryza nivara	39.38	3.00e-31	127.00
IUUC-Opu-083188	Oryza punctata	39.69	3.00e-31	127.00
IUUC-Oru-085074	Oryza rufipogon	39.38	3.00e-31	127.00
IUUC-Osa-086207	Oryza sativa	38.86	3.00e-31	127.00
IUUC-Olu-087904	Ostreococcus lucimarinus	40.85	5.00e-13	64.70
IUUC-Pop-099650	Populus trichocarpa	54.78	6.00e-59	219.00
IUUC-Ppe-101838	Prunus persica	49.33	8.00e-55	205.00
IUUC-Pgr-103645	Puccinia graminis	39.39	8.00e-14	70.10
IUUC-Smo-109575	Selaginella moellendorffii	41.41	2.00e-24	105.00
IUUC-Sit-109877	Setaria italica	38.10	6.00e-16	76.60
IUUC-Stu-112026	Solanum tuberosum	91.67	5.00e-80	289.00
IUUC-Sbi-114876	Sorghum bicolor	38.42	3.00e-29	121.00
IUUC-Tca-121589	Theobroma cacao	52.17	1.00e-48	185.00
IUUC-Tae-123880	Triticum aestivum	37.87	2.00e-27	114.00
IUUC-Tur-126124	Triticum urartu	37.50	2.00e-24	104.00
IUUC-Vvi-131688	Vitis vinifera	59.69	1.00e-69	254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence