iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111357

Ensembl Protein ID

Solyc08g076800.2.1

UniProt Accession

K4CN40; K4CN40_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc08g076800.2	Solyc08g076800.2.1	Solyc08g076800.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-09	37.6	104	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgpl...vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f++  +   v++C+Hv+h+dC+  w         + +CP+Cr
   Q: 104  CAICLVEFDNNSVlrlVTSCNHVYHQDCIDLW------LESHKTCPVCR 146
           ********88755233599*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MSSNVQNSTP SPTTYASPPV AIIFTIILVL IFFIGFSSIF FCRCFIQNLL YTWHLRNSPN 60
GTPIDPRVSA NGQLGLDPSI IKSFPTFTYS SVKNYRKESC GLECAICLVE FDNNSVLRLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCAA ATGTACAAAA TTCAACCCCA TCACCAACAA CATATGCCTC ACCACCAGTA 60
GCAATAATCT TCACTATCAT CCTTGTATTA ATTTTCTTCA TTGGTTTTTC ATCTATTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002545	Amborella trichopoda	40.61	1.00e-30	126.00
IUUC-Aly-005577	Arabidopsis lyrata	43.80	1.00e-51	196.00
IUUC-Ath-007042	Arabidopsis thaliana	42.20	2.00e-49	188.00
IUUC-Bol-016313	Brassica oleracea	44.93	2.00e-50	192.00
IUUC-Bra-017003	Brassica rapa	45.29	1.00e-50	192.00
IUUC-Gma-044335	Glycine max	43.11	6.00e-41	160.00
IUUC-Mtr-058535	Medicago truncatula	38.75	2.00e-43	168.00
IUUC-Pop-099444	Populus trichocarpa	44.53	1.00e-49	189.00
IUUC-Ppe-101206	Prunus persica	46.10	6.00e-55	206.00
IUUC-Smo-109435	Selaginella moellendorffii	49.33	4.00e-19	84.70
IUUC-Stu-112179	Solanum tuberosum	78.93	4.00e-118	417.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence