iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076822

Ensembl Protein ID

OB03G41110.1

UniProt Accession

J3LST5; J3LST5_ORYBR

Protein Name

PHD finger protein ING

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G41110	OB03G41110.1	OB03G41110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.50e-09	37.8	202	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C++ + ++  ++ C++  C+  ewfH+ C++l+  e++ +  kw+Cp Cr+
   Q: 202  TYC-ICHQVSYGD--MIACDNenCEggEWFHYSCVGLT-PETRFKG-KWFCPTCRN 252
           69*.********9..*****999*999***********.4444444.4******85 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAIARTGVYV DDYLEYSSTL AGDLQRILST MRELDERAHG IMGQTKEQIK YLLGVPSHGF 60
DRSNMDDDES ASERMKKDIE ASQDNALSLC TEKVLLARQA YDLIESHIKR LDEDLGQFAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAGATTTTC CCTAGCCGCC GCCGTCCCCC GAAACCCTAA TTCCCAAATC GAAGGATCGA 60
GCCAGGCCGG GAGCCGCCGG ATCCATCCTC CAATCGCCCG CCATGGCGAT CGCCCGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING
PF00628--PHD

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

obr:102717603

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	70.24	2.00e-96	344.00
IUUC-Ath-006578	Arabidopsis thaliana	65.77	1.00e-90	324.00
IUUC-Bdi-014650	Brachypodium distachyon	89.37	4.00e-132	462.00
IUUC-Bol-015751	Brassica oleracea	65.64	1.00e-97	347.00
IUUC-Bra-017962	Brassica rapa	65.27	4.00e-98	349.00
IUUC-Csv-026288	Ciona savignyi	30.58	2.00e-29	121.00
IUUC-Gma-044224	Glycine max	68.85	5.00e-99	352.00
IUUC-Hvu-047275	Hordeum vulgare	86.77	4.00e-131	459.00
IUUC-Lpe-051512	Leersia perrieri	95.26	5.00e-137	479.00
IUUC-Mtr-058288	Medicago truncatula	66.16	6.00e-102	362.00
IUUC-Mac-065671	Musa acuminata	74.70	4.00e-115	405.00
IUUC-Ogl-077432	Oryza glaberrima	97.23	2.00e-149	520.00
IUUC-Osa-085802	Oryza sativa	97.23	2.00e-149	520.00
IUUC-Olu-087851	Ostreococcus lucimarinus	32.80	9.00e-18	82.40
IUUC-Ppa-096009	Physcomitrella patens	58.02	1.00e-79	288.00
IUUC-Pop-099544	Populus trichocarpa	65.17	1.00e-86	311.00
IUUC-Ppe-101698	Prunus persica	67.69	2.00e-83	300.00
IUUC-Smo-108678	Selaginella moellendorffii	62.20	3.00e-87	313.00
IUUC-Sit-110189	Setaria italica	91.70	8.00e-132	461.00
IUUC-Sly-111209	Solanum lycopersicum	68.99	9.00e-92	328.00
IUUC-Stu-112762	Solanum tuberosum	68.99	2.00e-91	327.00
IUUC-Sbi-114379	Sorghum bicolor	89.72	5.00e-137	478.00
IUUC-Tca-121271	Theobroma cacao	69.11	2.00e-91	327.00
IUUC-Tae-122798	Triticum aestivum	86.38	2.00e-130	457.00
IUUC-Vvi-131583	Vitis vinifera	68.63	5.00e-100	355.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence