iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095686

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545047

Gene Name

PHYPADRAFT_28538

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S13_167V6	PP1S13_167V6.2	PP1S13_167V6.2
PP1S13_167V6	PP1S13_167V6.1	PP1S13_167V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	29.6	20	60

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCle+f  +d+  v++C H +h++C+  w      s+++  CP C
   Q: 20   CSICLESFcdDDPATVTNCRHEYHLQCILEW------SQRSKECPMC 60
           ********88777888***************......********** PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSSAAEFVEG GAQDPCDDAC SICLESFCDD DPATVTNCRH EYHLQCILEW SQRSKECPMC 60
WQPLTLKDSK SQELLIAVEQ ERALRRHKTQ AAQMYHRPSV EEYGFDRFAS YGDENCIMQH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTACCCAT GCTCCTTCTT CTACTTCTGC TCTTGCTCCT CCTCGTCCTC CTTCGATACC 60
AAAGCTCAAG CCCACGCTCA AGCCCATGCC CACGCTCAAG CCCACGCCCA AGCCCATGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_28538

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002655	Amborella trichopoda	40.57	4.00e-50	191.00
IUUC-Ath-007279	Arabidopsis thaliana	72.46	7.00e-28	117.00
IUUC-Bol-015999	Brassica oleracea	69.35	1.00e-23	102.00
IUUC-Mtr-058591	Medicago truncatula	43.00	1.00e-47	183.00
IUUC-Pop-099767	Populus trichocarpa	40.66	5.00e-40	157.00
IUUC-Ppe-101489	Prunus persica	40.69	2.00e-45	176.00
IUUC-Smo-109592	Selaginella moellendorffii	75.00	3.00e-37	145.00
IUUC-Stu-112642	Solanum tuberosum	52.20	7.00e-41	160.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence