iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095846

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545171

Gene Name

PHYPADRAFT_95550

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S282_57V6	PP1S282_57V6.1	PP1S282_57V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.00e-11	44.6	1118	1165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           + C vCg  ++ e s++ C+kC+  +H  Cl+++  e++p+ + w+Cp+C 
   Q: 1118 DTCRVCGVDEDYE-SIMLCDKCDAEYHTYCLNPP-LEKVPEGT-WFCPECV 1165
           68*****998876.7*******************.*******6.******6 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MKFLLLEVCV TKVFVDKEVG DKAAFGHRSW EVVEIKQEGE AMTAFDAMHI ARERGDHDRL 60
IGSTKSREIS TTELMHGAGH EDKFLKVEIF NLESDNSSRS DQGSIRSSRG DEVVKQTGKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTTCT TGCTTCTGGA AGTTTGCGTG ACAAAAGTAT TTGTGGACAA AGAAGTTGGT 60
GACAAAGCAG CCTTTGGACA CAGAAGTTGG GAAGTAGTGG AAATAAAGCA AGAAGGCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR028941--WHIM2_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50014--BROMODOMAIN_2
PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF02791--DDT
PF00628--PHD
PF15612--WHIM1
PF15613--WSD

SMART

SM00249--PHD

Gene Ontology

GO:0005720--C:nuclear heterochromatin
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0010216--P:maintenance of DNA methylation
GO:0016567--P:protein ubiquitination
GO:0090308--P:regulation of methylation-dependent chromatin silencing

KEGG

ppp:PHYPADRAFT_95550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002838	Amborella trichopoda	38.87	5.00e-90	326.00
IUUC-Bgr-012184	Blumeria graminis	46.15	2.00e-10	60.50
IUUC-Fox-037887	Fusarium oxysporum	43.75	1.00e-09	58.20
IUUC-Hvu-047583	Hordeum vulgare	35.57	5.00e-39	155.00
IUUC-Mor-056964	Magnaporthe oryzae	53.33	1.00e-11	64.30
IUUC-Mpo-057317	Magnaporthe poae	40.00	5.00e-09	57.00
IUUC-Oin-079536	Oryza indica	32.16	6.00e-15	75.10
IUUC-Pte-104195	Pyrenophora teres	44.83	1.00e-13	72.80
IUUC-Pyt-104566	Pyrenophora triticirepentis	44.83	9.00e-14	72.80
IUUC-Sly-111296	Solanum lycopersicum	27.75	2.00e-14	73.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence