iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126816

Ensembl Protein ID

TRIUR3_19163-P1

UniProt Accession

M7YD20; M7YD20_TRIUA

Genbank Protein ID

EMS48163.1

Protein Name

RING-H2 finger protein ATL3

Genbank Nucleotide ID

KD251704

Gene Name

TRIUR3_19163

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_19163	TRIUR3_19163-T1	TRIUR3_19163-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.00e-08	36.3	90	132

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl ++   ++  ++lp CgH fh +C+ +w       + + +CPlCr
   Q: 90   CAVCLAEMtdgER-GRLLPrCGHRFHVECIDRW------FRSNSSCPLCR 132
           ********66555.556666*************......999999****8 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MSSSEMEDSS LSSDIRFYAY AVLASFGVAA VLVVCFWQLY KLTVSARPQD MLPVSSSSGN 60
VAALRLRDIS ALPVFVYGGN GDGAPVGVEC AVCLAEMTDG ERGRLLPRCG HRFHVECIDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGAGCT CTGAGATGGA GGACTCCTCG CTGAGCAGCG ACATCAGGTT CTACGCGTAC 60
GCGGTTCTCG CGTCGTTCGG CGTGGCGGCG GTCCTCGTGG TGTGCTTCTG GCAGCTGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000788	Aegilops tauschii	55.00	2.00e-21	94.00
IUUC-Atr-002564	Amborella trichopoda	44.44	7.00e-19	85.90
IUUC-Bdi-015015	Brachypodium distachyon	70.80	1.00e-45	174.00
IUUC-Bra-017164	Brassica rapa	46.07	2.00e-19	88.60
IUUC-Lpe-050818	Leersia perrieri	64.44	1.00e-26	113.00
IUUC-Mtr-057631	Medicago truncatula	59.15	7.00e-22	96.70
IUUC-Oba-075668	Oryza barthii	58.21	3.00e-19	87.00
IUUC-Obr-076402	Oryza brachyantha	61.78	1.00e-33	134.00
IUUC-Ogl-077191	Oryza glaberrima	67.69	6.00e-18	81.60
IUUC-Ogu-078518	Oryza glumaepatula	64.00	4.00e-26	109.00
IUUC-Oin-079239	Oryza indica	66.15	2.00e-17	80.50
IUUC-Ome-081971	Oryza meridionalis	69.42	4.00e-31	126.00
IUUC-Oni-082229	Oryza nivara	63.20	5.00e-27	112.00
IUUC-Opu-083364	Oryza punctata	64.84	1.00e-33	134.00
IUUC-Oru-084646	Oryza rufipogon	61.60	5.00e-26	109.00
IUUC-Osa-085900	Oryza sativa	58.21	3.00e-19	87.40
IUUC-Pva-102709	Pteropus vampyrus	54.17	8.00e-13	67.80
IUUC-Sbi-114401	Sorghum bicolor	60.43	1.00e-33	134.00
IUUC-Tae-124226	Triticum aestivum	97.93	7.00e-80	288.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence