iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017197

Ensembl Protein ID

Bra019022.1-P

UniProt Accession

M4DR79; M4DR79_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra019022	Bra019022.1	Bra019022.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.30e-31	107.5	271	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpI+lelMrdPvv++ G+tydr+sI  w++sg++tcP+t+q l++++l+Pn +l++li  wc ++++
   Q: 271  IPADFRCPITLELMRDPVVVSMGQTYDRESIDLWIKSGHNTCPKTGQVLKHTNLIPNSALKNLIVMWCRDQKI 343
           8*******************************************************************99875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAVTLEVTPT RKRRPLVVGH LDSPNISDTK LFRSLFFASQ ELSHMQPLRF ILRRNSQSII 60
RKVKVLAAVF DELLRSHMVY SQSAQLCFEE MNIVMQRMKT LIEDCTRSSK LWLLLQIENV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTTA CCCTTGAAGT GACTCCGACG AGAAAACGGC GTCCTTTGGT CGTCGGACAT 60
CTCGATTCCC CGAACATATC AGATACGAAA CTGTTCCGAT CACTGTTCTT CGCATCGCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	48.70	7.00e-68	250.00
IUUC-Atr-002566	Amborella trichopoda	44.25	2.00e-126	446.00
IUUC-Aly-005828	Arabidopsis lyrata	82.27	0.00e+00	1047.00
IUUC-Ath-007101	Arabidopsis thaliana	82.62	0.00e+00	1053.00
IUUC-Bdi-014870	Brachypodium distachyon	44.53	3.00e-124	438.00
IUUC-Bol-015511	Brassica oleracea	98.66	0.00e+00	1304.00
IUUC-Gma-043531	Glycine max	54.41	2.00e-168	585.00
IUUC-Hvu-047557	Hordeum vulgare	45.55	1.00e-110	394.00
IUUC-Lch-049908	Latimeria chalumnae	37.50	5.00e-08	52.80
IUUC-Lpe-051445	Leersia perrieri	43.29	6.00e-108	384.00
IUUC-Mtr-058241	Medicago truncatula	53.65	2.00e-169	589.00
IUUC-Mac-065033	Musa acuminata	45.22	1.00e-107	383.00
IUUC-Oba-075591	Oryza barthii	44.94	6.00e-112	397.00
IUUC-Obr-076550	Oryza brachyantha	42.83	1.00e-99	357.00
IUUC-Ogl-077709	Oryza glaberrima	44.94	6.00e-112	397.00
IUUC-Ogu-078626	Oryza glumaepatula	44.94	5.00e-112	398.00
IUUC-Oin-080113	Oryza indica	44.94	8.00e-112	397.00
IUUC-Olo-080301	Oryza longistaminata	41.59	4.00e-68	252.00
IUUC-Ome-081924	Oryza meridionalis	45.04	1.00e-113	403.00
IUUC-Oni-082284	Oryza nivara	44.94	6.00e-112	397.00
IUUC-Opu-083971	Oryza punctata	45.48	5.00e-110	391.00
IUUC-Oru-084898	Oryza rufipogon	44.30	1.00e-119	423.00
IUUC-Osa-085986	Oryza sativa	43.82	3.00e-105	375.00
IUUC-Pop-099292	Populus trichocarpa	57.47	0.00e+00	743.00
IUUC-Ppe-101643	Prunus persica	59.06	0.00e+00	763.00
IUUC-Sit-110652	Setaria italica	44.62	5.00e-119	421.00
IUUC-Sly-111346	Solanum lycopersicum	55.91	0.00e+00	723.00
IUUC-Stu-112435	Solanum tuberosum	56.03	0.00e+00	696.00
IUUC-Sbi-114567	Sorghum bicolor	43.13	3.00e-112	399.00
IUUC-Tca-121203	Theobroma cacao	61.25	0.00e+00	779.00
IUUC-Tae-124205	Triticum aestivum	44.33	6.00e-103	368.00
IUUC-Vvi-131545	Vitis vinifera	60.06	0.00e+00	690.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence