iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112435

Ensembl Protein ID

PGSC0003DMT400071349

UniProt Accession

M1CNL4; M1CNL4_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400027759	PGSC0003DMT400071349	PGSC0003DMT400071349

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-33	115.6	286	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+CpIsl+lMrdPvv+++G+tydrssI  w++sg++tcP+t+q+lt++dl+Pn +l++li  wc e+++
   Q: 286  VPADFRCPISLDLMRDPVVVSTGQTYDRSSITLWFESGHTTCPKTGQTLTHTDLIPNSALKNLIAMWCREQKI 358
           8********************************************************************9876 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAVSPESFPP RKRRPSANCF VAPNLSDRNL LKSLLLLSSE ISTLRPLLFL LKRNTSSIIR 60
KSKLLSVLFE EILGRDFTYS NDSNTSRGGH VTGFPPSAVL CFDELYIVLQ RMKTLLEDCR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACGAATAAA AAAGCCTCCT CTATCACTTC CAAGAAAAGT CTTCTTTCAT TCTTTGATTG 60
CTTCAACTTT TAATTCATCT AAATACGATT CAATTTTCAG CATTTTCGTA ATTGTTTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

sot:102598314

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	50.48	3.00e-71	261.00
IUUC-Atr-002566	Amborella trichopoda	46.21	1.00e-130	459.00
IUUC-Aly-005828	Arabidopsis lyrata	55.25	0.00e+00	640.00
IUUC-Ath-007101	Arabidopsis thaliana	55.52	0.00e+00	634.00
IUUC-Bdi-014870	Brachypodium distachyon	45.12	3.00e-120	424.00
IUUC-Bol-015511	Brassica oleracea	56.03	0.00e+00	682.00
IUUC-Bra-017197	Brassica rapa	56.03	0.00e+00	678.00
IUUC-Gma-043531	Glycine max	60.88	1.00e-179	622.00
IUUC-Hvu-047557	Hordeum vulgare	47.56	2.00e-114	405.00
IUUC-Lpe-051445	Leersia perrieri	45.68	2.00e-108	385.00
IUUC-Mtr-058241	Medicago truncatula	62.20	0.00e+00	635.00
IUUC-Mac-065033	Musa acuminata	46.44	2.00e-117	415.00
IUUC-Oba-075591	Oryza barthii	45.72	2.00e-113	402.00
IUUC-Obr-076550	Oryza brachyantha	43.39	9.00e-101	360.00
IUUC-Ogl-077709	Oryza glaberrima	45.72	2.00e-113	402.00
IUUC-Ogu-078626	Oryza glumaepatula	45.72	1.00e-113	402.00
IUUC-Oin-080113	Oryza indica	45.56	3.00e-113	401.00
IUUC-Olo-080301	Oryza longistaminata	42.36	2.00e-70	259.00
IUUC-Ome-081924	Oryza meridionalis	45.99	1.00e-116	412.00
IUUC-Oni-082284	Oryza nivara	45.72	2.00e-113	402.00
IUUC-Opu-083971	Oryza punctata	45.93	3.00e-113	401.00
IUUC-Oru-084898	Oryza rufipogon	45.72	8.00e-117	413.00
IUUC-Osa-085986	Oryza sativa	47.70	5.00e-110	390.00
IUUC-Pop-099292	Populus trichocarpa	63.33	0.00e+00	803.00
IUUC-Ppe-101643	Prunus persica	62.99	0.00e+00	810.00
IUUC-Sit-110652	Setaria italica	45.09	1.00e-117	416.00
IUUC-Sly-111346	Solanum lycopersicum	97.11	0.00e+00	1259.00
IUUC-Sbi-114567	Sorghum bicolor	45.25	3.00e-110	391.00
IUUC-Tca-121203	Theobroma cacao	65.23	0.00e+00	840.00
IUUC-Tae-124205	Triticum aestivum	47.70	3.00e-104	371.00
IUUC-Vvi-131545	Vitis vinifera	66.81	0.00e+00	770.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence