iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017403

Ensembl Protein ID

Bra015635.1-P

UniProt Accession

M4DGL0; M4DGL0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra015635	Bra015635.1	Bra015635.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-07	30.6	314	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ ++  +l++G+ D t+++WD+r
   Q: 314  GHLDYSFSSAWhPNgQILATGNQDTTCRLWDVR 346
           89999*******77799**************97 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDIFDNSDLE YLDDFHGFSD SEDDEPFGEF DHKSEADSDF EDDLDPTQEG DTSALEARNG 60
KDIQGIPWER LNYSRDQYRY KRLQQYKNFE SLFRSRQDLD KECLQVKEGK HFYDFQFNTR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATATCT TCGACAACTC TGACCTTGAA TACCTCGATG ACTTTCACGG CTTCTCTGAT 60
TCTGAAGATG ATGAACCCTT TGGAGAGTTT GATCACAAGA GTGAAGCTGA CTCTGATTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	56.99	1.00e-152	532.00
IUUC-Atr-002734	Amborella trichopoda	67.19	0.00e+00	636.00
IUUC-Aly-005521	Arabidopsis lyrata	83.15	0.00e+00	765.00
IUUC-Ath-007611	Arabidopsis thaliana	82.48	0.00e+00	768.00
IUUC-Bol-015183	Brassica oleracea	96.85	0.00e+00	896.00
IUUC-Dse-031456	Dothistroma septosporum	30.03	3.00e-42	166.00
IUUC-Gma-044288	Glycine max	74.21	0.00e+00	653.00
IUUC-Hvu-047718	Hordeum vulgare	65.57	7.00e-159	553.00
IUUC-Lpe-051582	Leersia perrieri	64.90	2.00e-158	551.00
IUUC-Mtr-058564	Medicago truncatula	75.32	0.00e+00	635.00
IUUC-Mac-065012	Musa acuminata	64.39	5.00e-158	551.00
IUUC-Obr-076093	Oryza brachyantha	64.16	8.00e-157	546.00
IUUC-Ogu-078133	Oryza glumaepatula	65.35	6.00e-158	550.00
IUUC-Oin-079185	Oryza indica	60.63	2.00e-154	538.00
IUUC-Olo-080502	Oryza longistaminata	52.53	8.00e-136	476.00
IUUC-Oni-082850	Oryza nivara	65.10	2.00e-157	548.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	30.10	2.00e-45	177.00
IUUC-Spo-108140	Schizosaccharomyces pombe	28.54	1.00e-38	153.00
IUUC-Smo-109252	Selaginella moellendorffii	61.81	2.00e-157	548.00
IUUC-Sit-110668	Setaria italica	65.26	1.00e-152	532.00
IUUC-Sly-111186	Solanum lycopersicum	71.71	0.00e+00	637.00
IUUC-Stu-111950	Solanum tuberosum	71.95	0.00e+00	643.00
IUUC-Sbi-113990	Sorghum bicolor	64.82	5.00e-162	563.00
IUUC-Tca-121603	Theobroma cacao	64.82	6.00e-171	593.00
IUUC-Tae-124553	Triticum aestivum	64.56	9.00e-157	546.00
IUUC-Tur-126710	Triticum urartu	53.14	3.00e-141	494.00
IUUC-Vvi-131311	Vitis vinifera	70.07	0.00e+00	664.00
IUUC-Yli-134594	Yarrowia lipolytica	31.25	2.00e-38	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence