iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012330

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RNF12 protein

Genbank Nucleotide ID

DAAA02073777

Gene Name

RNF12; RLIM

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000040357.2	ENSBTAT00000055387.2	ENSBTAP00000052691.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-06	28.1	580	621

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC +++  g  ++vlpC H +h +C+ +w         + +CP+Cr
   Q: 580  CTICITEYTAGnmLRVLPCSHEYHYQCIDQW------LEEHSNCPICR 621
           9*******5555599****************......**********8 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MESSDSDDEE DRVSVRHRGQ KDRLAREDDY FRFVSDLSEE DYILMRDNNL LGPLGESTEE 60
ELRQRLQLMK ENLPQNSDEN TDRGDASDNE SSENSLLDWL TTFGQTENVT SEQKENQSWR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCTGAGG TGCAATAGCA GAGTAGTGGA GCAGCAGGGA ACCTAGGCAG ACGGTTGTCC 60
GACTGAGCGC GTTCCAGTCA CTCCCGGGCG GAAGCAGAAG CTGAAGACTA CCTGACAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0060816--P:random inactivation of X chromosome
GO:1900095--P:regulation of dosage compensation by inactivation of X chromosome

KEGG

bta:785287

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002500	Amborella trichopoda	43.75	4.00e-16	79.70
IUUC-Bdi-015037	Brachypodium distachyon	45.45	1.00e-13	70.50
IUUC-Bra-016746	Brassica rapa	43.42	4.00e-16	78.60
IUUC-Cfa-020202	Canis familiaris	51.39	2.00e-99	356.00
IUUC-Ggr-039947	Gaeumannomyces graminis	53.33	3.00e-12	67.00
IUUC-Gma-044161	Glycine max	48.53	4.00e-16	79.30
IUUC-Hvu-047221	Hordeum vulgare	46.48	1.00e-15	75.10
IUUC-Lpe-051589	Leersia perrieri	41.18	3.00e-15	76.60
IUUC-Mpo-057470	Magnaporthe poae	53.33	1.00e-12	68.60
IUUC-Mla-058879	Melampsora laricipopulina	42.22	2.00e-07	50.80
IUUC-Mpu-065838	Mustela putorius furo	53.77	1.00e-86	313.00
IUUC-Mlu-068129	Myotis lucifugus	45.79	1.00e-108	387.00
IUUC-Oba-075032	Oryza barthii	40.58	4.00e-15	76.30
IUUC-Obr-076472	Oryza brachyantha	40.58	4.00e-15	76.30
IUUC-Ogl-077419	Oryza glaberrima	40.58	4.00e-15	76.30
IUUC-Oin-079553	Oryza indica	41.18	2.00e-15	77.00
IUUC-Olo-080256	Oryza longistaminata	41.18	2.00e-15	77.00
IUUC-Ome-081196	Oryza meridionalis	40.58	4.00e-15	76.30
IUUC-Opu-083444	Oryza punctata	46.15	2.00e-14	71.60
IUUC-Oru-085142	Oryza rufipogon	40.58	4.00e-15	76.30
IUUC-Osa-085890	Oryza sativa	40.58	4.00e-15	76.30
IUUC-Oga-088110	Otolemur garnettii	42.74	1.00e-79	290.00
IUUC-Oar-090427	Ovis aries	77.14	0.00e+00	744.00
IUUC-Ppa-096010	Physcomitrella patens	47.14	2.00e-16	80.50
IUUC-Pop-099775	Populus trichocarpa	46.38	2.00e-15	77.40
IUUC-Ppe-101202	Prunus persica	44.87	1.00e-15	78.20
IUUC-Pgr-103322	Puccinia graminis	39.22	1.00e-09	57.00
IUUC-Ptt-103814	Puccinia triticina	40.35	3.00e-10	58.90
IUUC-Smo-109212	Selaginella moellendorffii	37.97	9.00e-16	77.80
IUUC-Tca-121497	Theobroma cacao	41.03	6.00e-15	75.50
IUUC-Tae-125562	Triticum aestivum	42.03	2.00e-15	77.40
IUUC-Vvi-131215	Vitis vinifera	43.48	2.00e-15	77.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence