iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017657

Ensembl Protein ID

Bra038813.1-P

UniProt Accession

M4FCJ4; M4FCJ4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra038813	Bra038813.1	Bra038813.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.30e-07	30.3	105	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+ f++g   + lp CgHvfh++C+  w        k+++CP+Cr
   Q: 105  CVVCLDGFRQGqwCRNLPgCGHVFHRKCVDTW------LLKAASCPICR 147
           ********66665556678*************......99********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPPTNVSGEP PYTSASLPPP KAKTKIISLF LVGVIMISIF SLFLLLLGIA SLLLLPFLLS 60
SLHRHLRCRR RNRRHVSSDG LSSRFVKKLP QFKFYEPTTR HGSDCVVCLD GFRQGQWCRN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCTCCGA CGAATGTCTC CGGCGAGCCA CCGTATACCT CGGCGTCACT ACCACCGCCA 60
AAGGCGAAAA CGAAAATTAT CTCTCTATTC CTCGTAGGCG TTATCATGAT ATCAATATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002642	Amborella trichopoda	46.74	3.00e-17	80.50
IUUC-Aly-006401	Arabidopsis lyrata	80.56	4.00e-52	196.00
IUUC-Ath-007060	Arabidopsis thaliana	81.11	3.00e-52	197.00
IUUC-Bol-015094	Brassica oleracea	84.08	1.00e-44	171.00
IUUC-Mtr-058539	Medicago truncatula	52.44	2.00e-22	97.80
IUUC-Pop-099663	Populus trichocarpa	71.15	8.00e-20	89.40
IUUC-Ppe-101566	Prunus persica	56.82	4.00e-24	103.00
IUUC-Sit-110293	Setaria italica	52.86	1.00e-14	71.60
IUUC-Sly-111913	Solanum lycopersicum	44.05	2.00e-17	81.30
IUUC-Stu-112197	Solanum tuberosum	61.22	8.00e-17	79.00
IUUC-Tca-121196	Theobroma cacao	56.70	2.00e-25	108.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence