iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095900

Ensembl Protein ID

PP1S279_42V6.1

UniProt Accession

A9TPA8; A9TPA8_PHYPA

Genbank Protein ID

EDQ54723.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545168

Gene Name

PHYPADRAFT_171186

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S279_42V6	PP1S279_42V6.1	PP1S279_42V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-10	40.0	213	244

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
            ++l++   d ++++++++D +++vWD r g+
   Q: 213  LFDLSYctMDkDRIIACGNDSNVHVWDRRVGK 244
           5677777523588999999********77666 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MDKFVVHEAG PSFPPIQRGL LSRQKWKAAA YQVDGKLPAA YKHFLLNALL QSYSEMGSFP 60
QSNLSRDFPP PVHAPVWQGS VVDTLSSFTE IVGMASGNTF FTSRPIVTCV EFDAQGVYVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACAAAT TTGTGGTACA TGAAGCTGGC CCTTCCTTTC CACCTATCCA GCGAGGATTG 60
CTCTCCAGGT ATGAGCCGTG CTGGAGACCT TGTTATCCAT GGTGTAACCG ATGCTTGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_171186

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002743	Amborella trichopoda	36.49	2.00e-80	292.00
IUUC-Bdi-014687	Brachypodium distachyon	36.64	2.00e-79	289.00
IUUC-Lpe-051397	Leersia perrieri	33.69	3.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence