iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121679

Ensembl Protein ID

EOY30333

UniProt Accession

A0A061GLQ4; A0A061GLQ4_THECC

Genbank Protein ID

EOY30333.1

Protein Name

ALF domain class transcription factor isoform 1

Genbank Nucleotide ID

CM001887

Gene Name

TCM_037580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_037580	EOY30334	EOY30334
TCM_037580	EOY30333	EOY30333

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.90e-08	34.7	197	247

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cge++++++  ++C++C++wfH +C+k++     +  +++ Cp+C++
   Q: 197  TLCGACGENYASDEFWICCDICEKWFHGKCVKIT-PARAEHIKQYKCPSCSN 247
           68************99******************.666666677******86 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDGGTQYNLR TVEEVFRDFK GRRAGMIKAL TTDVGEFYEQ CDPEKENLCL YGFPDEHWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQEKDW LSLVAVHSDA WLLAVAFYFG ARFGFDKADR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAACAACC ACCCGCGGCT CACCCCATCT CGGAACCCTA ACCTTACCCA AAATTCCAGC 60
TCCGAAATCG GTTTCAAATC CGCATTATAC CCCCCGCAGC AACAGTAACT CCCGCTACGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

tcc:TCM_037580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002983	Amborella trichopoda	85.20	1.00e-91	328.00
IUUC-Bdi-014599	Brachypodium distachyon	69.08	3.00e-82	297.00
IUUC-Fox-037812	Fusarium oxysporum	43.18	4.00e-06	45.10
IUUC-Gma-043342	Glycine max	90.48	1.00e-95	341.00
IUUC-Mtr-057868	Medicago truncatula	77.22	1.00e-90	324.00
IUUC-Osa-085794	Oryza sativa	66.91	2.00e-81	294.00
IUUC-Pop-099768	Populus trichocarpa	87.75	6.00e-99	352.00
IUUC-Ppe-101390	Prunus persica	82.61	3.00e-97	346.00
IUUC-Smo-109237	Selaginella moellendorffii	51.87	5.00e-52	196.00
IUUC-Sit-110822	Setaria italica	82.76	4.00e-56	210.00
IUUC-Sly-111824	Solanum lycopersicum	81.25	3.00e-83	300.00
IUUC-Stu-112881	Solanum tuberosum	77.87	1.00e-86	311.00
IUUC-Tae-125571	Triticum aestivum	66.91	4.00e-83	300.00
IUUC-Vvi-131739	Vitis vinifera	92.86	2.00e-103	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence