iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108871

Ensembl Protein ID

EFJ14567

UniProt Accession

D8SMA7; D8SMA7_SELML

Genbank Protein ID

EFJ14567.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377627

Gene Name

SELMODRAFT_445918

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_445918	EFJ14567	EFJ14567

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-06	29.6	148	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf..sd.tllvsGsdDgtikvWDlrtgvll 36
            ++f  s+   l+sGs D  +++W+  t  ++
   Q: 148  VVRFhpSSpEVLASGSLDYEVRLWNANTAECV 179
           46677555688**************9888886 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MVSSCFENNA AGVSGSQASS CSQCQSKNLA DNVLRMLDWR QISPSVRRPS KRLWRDTAAS 60
SSKCHGHSRE TTNAKHALVN WLEAESFKHS IAKYCSLVPA PRSTIAAAFS PDGLTLASTH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGTCCT CCTGCTTTGA AAATAATGCG GCAGGAGTGT CTGGATCGCA GGCATCGTCG 60
TGCTCACAGT GCCAGTCAAA GAACTTGTAA GAATTTCTTA TGTTTATTTG TTTCTAACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_445918

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002557	Amborella trichopoda	55.28	4.00e-99	355.00
IUUC-Bta-012455	Bos taurus	38.80	3.00e-27	117.00
IUUC-Bol-016094	Brassica oleracea	64.05	4.00e-87	315.00
IUUC-Bra-017308	Brassica rapa	47.20	5.00e-170	590.00
IUUC-Cja-019073	Callithrix jacchus	39.66	1.00e-27	117.00
IUUC-Cpo-022101	Cavia porcellus	39.66	3.00e-27	117.00
IUUC-Cin-025567	Ciona intestinalis	37.61	4.00e-21	95.50
IUUC-Csv-026005	Ciona savignyi	38.46	7.00e-22	96.30
IUUC-Ete-032864	Echinops telfairi	41.51	5.00e-27	116.00
IUUC-Eeu-034440	Erinaceus europaeus	39.66	3.00e-27	117.00
IUUC-Gga-040787	Gallus gallus	41.51	1.00e-27	118.00
IUUC-Gac-041321	Gasterosteus aculeatus	40.46	1.00e-27	118.00
IUUC-Ggo-044775	Gorilla gorilla	39.66	3.00e-27	117.00
IUUC-Hvu-047536	Hordeum vulgare	47.90	2.00e-169	588.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	39.66	2.00e-27	116.00
IUUC-Meu-056320	Macropus eugenii	41.88	2.00e-28	121.00
IUUC-Mtr-058484	Medicago truncatula	73.58	7.00e-89	321.00
IUUC-Mmu-064090	Mus musculus	39.66	3.00e-27	117.00
IUUC-Mlu-068038	Myotis lucifugus	39.66	3.00e-27	117.00
IUUC-Oan-073623	Ornithorhynchus anatinus	39.53	9.00e-28	118.00
IUUC-Ola-086729	Oryzias latipes	41.04	8.00e-28	119.00
IUUC-Olu-087735	Ostreococcus lucimarinus	51.31	1.00e-51	196.00
IUUC-Pma-094563	Petromyzon marinus	41.88	1.00e-26	112.00
IUUC-Pab-098647	Pongo abelii	39.66	3.00e-27	117.00
IUUC-Pop-099742	Populus trichocarpa	67.49	6.00e-93	334.00
IUUC-Pva-103187	Pteropus vampyrus	40.34	1.00e-26	115.00
IUUC-Sit-110786	Setaria italica	66.38	5.00e-88	318.00
IUUC-Sly-111631	Solanum lycopersicum	65.53	4.00e-92	332.00
IUUC-Ssc-116094	Sus scrofa	39.66	3.00e-27	117.00
IUUC-Tsy-119552	Tarsius syrichta	38.67	5.00e-22	99.80
IUUC-Tae-124768	Triticum aestivum	69.72	2.00e-85	308.00
IUUC-Tur-126480	Triticum urartu	50.23	2.00e-159	555.00
IUUC-Vpa-130741	Vicugna pacos	43.09	1.00e-24	108.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence