iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002859

Ensembl Protein ID

ERN12564

UniProt Accession

W1PX90; W1PX90_AMBTC

Genbank Protein ID

ERN12564.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392614

Gene Name

AMTR_s00025p00209980

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00025p00209980	ERN12564	ERN12564

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-28	96.6	526	557
UBD/Beta-Prp	1.20e-62	212.2	146	475

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+d++t+l+f  d + l+s+s Dgt++vWD+
   Q: 526  GHSDRITDLCFsEDgKWLLSSSMDGTLRVWDV 557
           8**********955699**************8 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlk.ghedsvlsls 101
            +kg +++v +cv      +++a+g++dg++ +++++    + s+  +  ++vta++f  dg+  l++g++ ++i +w+l+++ + +++k +h++s++sl+
   Q: 146  DFKGRNSAVHCCVSS-SALDVVAVGCADGKVHIHNLRYDEEVVSFtHSTRGAVTALSFRTDGQpHLASGGSSGVISIWNLDKRRIHSVIKdAHDSSIVSLH 245
           678888899998888.77899****************99999999899999***********99*************************999********* PP
   S: 102  fspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgght.dsvyslsfdsng...... 192
           f+++  +l s s+d+ i++w  +t         + sgh++   c+++ + g+ l s++ Dr+ r+ +++++   r+l++ h  ++ + l+++++       
   Q: 246  FFANEPVLMSSSSDNSIKMWIFDTSDQEARllrFRSGHSAPPLCIRFYGYGRHLLSAGQDRAFRFLSISQDHQSRELSQRHVsKRAKRLKLKEEEiklkpv 346
           ********************9988877777788***********************************999999999666651456667766666777777 PP
   S: 193  .............kelvsgsldg.tvklwdlq...tgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn........ss 266
                          +v++ +d+ +  +w lq    ge     ++ +  ++vks ++s  +++ v g++ g i  ++l+sg+  +++              
   Q: 347  isfdfaeirqrdwCNVVTCHMDTpQAYVWRLQnyvLGEHilKPSCPDNPTPVKSCAVSACGNFAVLGTQGGWIERFNLQSGERRGSYVENYeqrrwahdGE 447
           777777777888899*******97899*****888444411455666669*******************************99998876557788999999 PP
   S: 267  visvavlsfgdnvlvlgsedskvniwklk 295
           v+s a+ + ++ +l++++  +++++w++k
   Q: 448  VVSLAC-DATNCHLISAGYHGDIKVWDFK 475
           999999.999*****************97 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MPSPPGHSPR HPRLARLAAR PGPQLPKKIR ALASYRDFTF AATGNEIAIF KRAHKVATWI 60
KHNEKVNMLL LFGDHILSLD IRGNLYIWAF KDLENSVAPV GHIQLEQNFS PSCIMHPDTY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCTAGCC CGCCTGGGCA CTCGCCTAGG CACCCTCGCT TAGCCCGCCT GGCAGCCCGC 60
CCAGGTACAT CCGCCCTGGG CGGACGCTCA GATACATCCG CCCGTGTAGG GCTGCTTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011041--Quinoprot_gluc/sorb_DH
IPR027295--Quinoprotein_ADH-like_fam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0003824--F:catalytic activity
GO:0006364--P:rRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	64.43	0.00e+00	1148.00
IUUC-Aml-002289	Ailuropoda melanoleuca	33.84	2.00e-127	448.00
IUUC-Apl-003505	Anas platyrhynchos	33.68	1.00e-126	446.00
IUUC-Aca-004339	Anolis carolinensis	33.95	1.00e-126	446.00
IUUC-Aly-005913	Arabidopsis lyrata	67.82	0.00e+00	1161.00
IUUC-Ath-006767	Arabidopsis thaliana	67.05	0.00e+00	1158.00
IUUC-Ago-007763	Ashbya gossypii	30.56	2.00e-98	352.00
IUUC-Acl-008275	Aspergillus clavatus	29.35	2.00e-78	286.00
IUUC-Afl-008457	Aspergillus flavus	30.64	1.00e-70	260.00
IUUC-Afu-008914	Aspergillus fumigatus	27.24	9.00e-71	260.00
IUUC-Ani-009225	Aspergillus nidulans	30.31	6.00e-80	291.00
IUUC-Aor-010046	Aspergillus oryzae	29.20	1.00e-88	320.00
IUUC-Ate-010337	Aspergillus terreus	27.90	1.00e-84	306.00
IUUC-Ame-010963	Astyanax mexicanus	33.99	2.00e-129	455.00
IUUC-Bgr-011973	Blumeria graminis	28.70	9.00e-96	343.00
IUUC-Bta-012462	Bos taurus	34.14	1.00e-126	446.00
IUUC-Bci-013940	Botrytis cinerea	30.40	2.00e-109	389.00
IUUC-Bdi-014725	Brachypodium distachyon	66.09	0.00e+00	1156.00
IUUC-Bol-016534	Brassica oleracea	68.66	0.00e+00	1175.00
IUUC-Bra-016781	Brassica rapa	66.48	0.00e+00	1139.00
IUUC-Cel-018581	Caenorhabditis elegans	27.10	2.00e-79	289.00
IUUC-Cja-019675	Callithrix jacchus	32.87	4.00e-134	471.00
IUUC-Cfa-020118	Canis familiaris	33.64	2.00e-128	452.00
IUUC-Cpo-021798	Cavia porcellus	33.57	7.00e-127	447.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	34.19	4.00e-40	158.00
IUUC-Csa-023547	Chlorocebus sabaeus	33.10	1.00e-125	442.00
IUUC-Cho-024518	Choloepus hoffmanni	32.25	4.00e-46	178.00
IUUC-Cin-025339	Ciona intestinalis	31.01	7.00e-125	440.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	28.38	2.00e-87	316.00
IUUC-Cne-026859	Cryptococcus neoformans	32.64	4.00e-125	441.00
IUUC-Cme-027173	Cyanidioschyzon merolae	28.13	5.00e-75	275.00
IUUC-Dre-027733	Danio rerio	33.91	3.00e-128	451.00
IUUC-Dno-029439	Dasypus novemcinctus	33.68	2.00e-121	429.00
IUUC-Dor-030329	Dipodomys ordii	32.01	5.00e-56	211.00
IUUC-Dse-031511	Dothistroma septosporum	27.85	3.00e-82	298.00
IUUC-Dme-031694	Drosophila melanogaster	31.74	4.00e-115	407.00
IUUC-Ete-032930	Echinops telfairi	33.87	1.00e-106	380.00
IUUC-Eca-033302	Equus caballus	33.18	1.00e-122	432.00
IUUC-Eeu-034516	Erinaceus europaeus	33.29	9.00e-132	463.00
IUUC-Fca-036064	Felis catus	37.54	2.00e-125	442.00
IUUC-Fal-037024	Ficedula albicollis	33.49	6.00e-130	457.00
IUUC-Fox-037787	Fusarium oxysporum	28.40	9.00e-82	297.00
IUUC-Fso-038378	Fusarium solani	28.80	9.00e-87	314.00
IUUC-Gmo-039637	Gadus morhua	35.01	9.00e-74	270.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.36	5.00e-91	328.00
IUUC-Gga-040982	Gallus gallus	33.99	1.00e-140	493.00
IUUC-Gac-041565	Gasterosteus aculeatus	34.50	8.00e-121	427.00
IUUC-Gma-043414	Glycine max	68.02	0.00e+00	1179.00
IUUC-Ggo-045463	Gorilla gorilla	33.03	5.00e-124	437.00
IUUC-Hsa-045675	Homo sapiens	33.10	7.00e-126	443.00
IUUC-Hvu-047352	Hordeum vulgare	66.30	0.00e+00	1110.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	32.64	7.00e-134	470.00
IUUC-Kpa-049164	Komagataella pastoris	32.12	3.00e-102	365.00
IUUC-Lch-050476	Latimeria chalumnae	33.75	1.00e-136	479.00
IUUC-Lpe-051556	Leersia perrieri	54.12	0.00e+00	844.00
IUUC-Loc-052820	Lepisosteus oculatus	34.22	3.00e-133	468.00
IUUC-Lma-052961	Leptosphaeria maculans	28.59	4.00e-84	305.00
IUUC-Laf-054006	Loxodonta africana	32.87	1.00e-121	429.00
IUUC-Mcc-055037	Macaca mulatta	32.99	3.00e-125	441.00
IUUC-Mor-057280	Magnaporthe oryzae	28.72	5.00e-87	314.00
IUUC-Mpo-057408	Magnaporthe poae	28.71	4.00e-83	301.00
IUUC-Mtr-058473	Medicago truncatula	69.24	0.00e+00	1212.00
IUUC-Mla-058892	Melampsora laricipopulina	32.56	2.00e-109	389.00
IUUC-Mga-059598	Meleagris gallopavo	29.29	5.00e-100	357.00
IUUC-Mvi-060334	Microbotryum violaceum	32.37	1.00e-106	380.00
IUUC-Mmr-061239	Microcebus murinus	33.29	4.00e-127	447.00
IUUC-Mdo-062471	Monodelphis domestica	34.40	6.00e-124	437.00
IUUC-Mmu-063872	Mus musculus	34.07	7.00e-136	476.00
IUUC-Mac-064631	Musa acuminata	69.88	0.00e+00	1181.00
IUUC-Mpu-066039	Mustela putorius furo	33.87	2.00e-137	481.00
IUUC-Mlu-067485	Myotis lucifugus	33.49	2.00e-123	435.00
IUUC-Nfi-068319	Neosartorya fischeri	27.88	3.00e-84	305.00
IUUC-Ncr-068725	Neurospora crassa	28.90	1.00e-92	333.00
IUUC-Nle-069050	Nomascus leucogenys	33.33	2.00e-126	446.00
IUUC-Opr-070437	Ochotona princeps	30.64	1.00e-39	157.00
IUUC-Ont-071574	Oreochromis niloticus	35.03	4.00e-130	457.00
IUUC-Oan-072826	Ornithorhynchus anatinus	35.29	8.00e-139	486.00
IUUC-Ocu-073995	Oryctolagus cuniculus	36.52	2.00e-120	426.00
IUUC-Oba-075407	Oryza barthii	61.39	0.00e+00	1016.00
IUUC-Obr-076451	Oryza brachyantha	67.13	0.00e+00	1191.00
IUUC-Ogl-077535	Oryza glaberrima	67.01	0.00e+00	1163.00
IUUC-Ogu-077995	Oryza glumaepatula	60.73	0.00e+00	1013.00
IUUC-Oin-079431	Oryza indica	67.40	0.00e+00	1170.00
IUUC-Olo-080495	Oryza longistaminata	60.98	0.00e+00	998.00
IUUC-Oni-082336	Oryza nivara	64.74	0.00e+00	1093.00
IUUC-Opu-084028	Oryza punctata	61.45	0.00e+00	960.00
IUUC-Oru-084500	Oryza rufipogon	60.52	0.00e+00	1011.00
IUUC-Osa-086242	Oryza sativa	67.51	0.00e+00	1173.00
IUUC-Ola-086612	Oryzias latipes	34.50	1.00e-106	379.00
IUUC-Olu-087703	Ostreococcus lucimarinus	35.37	6.00e-146	510.00
IUUC-Oga-088572	Otolemur garnettii	33.22	8.00e-126	443.00
IUUC-Oar-090363	Ovis aries	33.80	2.00e-129	455.00
IUUC-Ptr-090477	Pan troglodytes	33.10	6.00e-125	441.00
IUUC-Pan-092914	Papio anubis	32.99	1.00e-124	439.00
IUUC-Psi-093019	Pelodiscus sinensis	33.14	3.00e-127	448.00
IUUC-Pma-094303	Petromyzon marinus	31.69	2.00e-108	385.00
IUUC-Pno-094938	Phaeosphaeria nodorum	28.68	2.00e-76	279.00
IUUC-Ppa-095720	Physcomitrella patens	53.91	0.00e+00	927.00
IUUC-Pfo-097034	Poecilia formosa	33.72	3.00e-120	425.00
IUUC-Pab-097669	Pongo abelii	32.87	4.00e-125	441.00
IUUC-Pop-098835	Populus trichocarpa	68.05	0.00e+00	1181.00
IUUC-Pca-101097	Procavia capensis	36.54	8.00e-46	177.00
IUUC-Ppe-101430	Prunus persica	71.69	0.00e+00	1266.00
IUUC-Pva-103152	Pteropus vampyrus	33.06	8.00e-128	450.00
IUUC-Pgr-103517	Puccinia graminis	30.73	2.00e-121	429.00
IUUC-Ptt-103697	Puccinia triticina	29.91	5.00e-96	344.00
IUUC-Pte-104121	Pyrenophora teres	28.02	9.00e-84	304.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	28.33	2.00e-85	309.00
IUUC-Rno-105435	Rattus norvegicus	33.76	3.00e-132	464.00
IUUC-Sce-106202	Saccharomyces cerevisiae	28.93	3.00e-82	299.00
IUUC-Sha-107272	Sarcophilus harrisii	34.39	3.00e-129	455.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	35.62	6.00e-134	470.00
IUUC-Spo-108256	Schizosaccharomyces pombe	35.05	1.00e-130	459.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	29.70	2.00e-103	369.00
IUUC-Smo-108762	Selaginella moellendorffii	54.09	0.00e+00	914.00
IUUC-Sit-110051	Setaria italica	67.60	0.00e+00	1185.00
IUUC-Sly-111181	Solanum lycopersicum	70.50	0.00e+00	1197.00
IUUC-Stu-112018	Solanum tuberosum	70.64	0.00e+00	1203.00
IUUC-Sar-113348	Sorex araneus	31.86	2.00e-88	319.00
IUUC-Sbi-114282	Sorghum bicolor	67.52	0.00e+00	1206.00
IUUC-Sre-114946	Sporisorium reilianum	33.25	5.00e-78	285.00
IUUC-Ssc-115287	Sus scrofa	33.53	4.00e-128	451.00
IUUC-Tgu-117138	Taeniopygia guttata	32.41	4.00e-113	401.00
IUUC-Tru-118232	Takifugu rubripes	33.68	1.00e-121	429.00
IUUC-Tsy-119502	Tarsius syrichta	27.62	7.00e-82	297.00
IUUC-Tni-120378	Tetraodon nigroviridis	36.42	7.00e-126	443.00
IUUC-Tca-121506	Theobroma cacao	71.05	0.00e+00	1215.00
IUUC-Tre-122166	Trichoderma reesei	28.34	5.00e-91	328.00
IUUC-Tvi-122385	Trichoderma virens	28.27	2.00e-94	339.00
IUUC-Tae-122836	Triticum aestivum	66.36	0.00e+00	1198.00
IUUC-Tur-126490	Triticum urartu	57.49	0.00e+00	942.00
IUUC-Tme-127157	Tuber melanosporum	31.33	3.00e-96	345.00
IUUC-Tbe-127981	Tupaia belangeri	36.03	1.00e-118	419.00
IUUC-Ttr-128886	Tursiops truncatus	33.10	8.00e-126	443.00
IUUC-Uma-129439	Ustilago maydis	30.28	2.00e-83	302.00
IUUC-Vda-129760	Verticillium dahliae	27.23	9.00e-91	327.00
IUUC-Vpa-130456	Vicugna pacos	32.95	4.00e-126	444.00
IUUC-Vvi-131086	Vitis vinifera	72.07	0.00e+00	1285.00
IUUC-Xtr-131829	Xenopus tropicalis	35.67	2.00e-145	508.00
IUUC-Xma-133588	Xiphophorus maculatus	33.26	1.00e-117	416.00
IUUC-Yli-134328	Yarrowia lipolytica	29.68	3.00e-88	318.00
IUUC-Zma-135808	Zea mays	66.13	0.00e+00	1184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence