iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121270

Ensembl Protein ID

EOX92452

UniProt Accession

A0A061DJC9; A0A061DJC9_THECC

Genbank Protein ID

EOX92452.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001879

Gene Name

TCM_001398

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_001398	EOX92452	EOX92452

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-29	102.4	10	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           vp++f+CpIsl++M+ Pv l++G+tydr+sI++wl+sg++tcP t+q l+++++vPn  l+rliq w ++ 
   Q: 10   VPSFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDSGHNTCPATMQVLQSKEFVPNRNLQRLIQIWSDSV 80
           8******************************************************************9865 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MRRDDLYITV PSFFRCPISL DVMKSPVSLC TGVTYDRASI QRWLDSGHNT CPATMQVLQS 60
KEFVPNRNLQ RLIQIWSDSV ARRQVEADSA ATSVVVPSPD QVKVLVKQLD NNCFSSLAKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAA TGAGAAGAGA CGACTTGTAC ATTACGGTTC CGAGTTTTTT TCGGTGTCCG 60
ATATCGCTGG ACGTGATGAA ATCCCCTGTG AGCTTGTGCA CGGGCGTAAC ATACGACCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002532	Amborella trichopoda	47.84	2.00e-101	361.00
IUUC-Aly-005744	Arabidopsis lyrata	54.98	7.00e-109	386.00
IUUC-Ath-007332	Arabidopsis thaliana	54.98	4.00e-109	387.00
IUUC-Bdi-014371	Brachypodium distachyon	33.18	7.00e-35	140.00
IUUC-Bol-015831	Brassica oleracea	55.21	1.00e-122	431.00
IUUC-Bra-017320	Brassica rapa	56.16	5.00e-117	413.00
IUUC-Gma-042668	Glycine max	58.49	1.00e-126	445.00
IUUC-Lpe-050910	Leersia perrieri	73.24	2.00e-28	118.00
IUUC-Mtr-057795	Medicago truncatula	60.53	2.00e-136	478.00
IUUC-Mac-064700	Musa acuminata	35.93	3.00e-53	201.00
IUUC-Ogl-077083	Oryza glaberrima	35.81	7.00e-35	140.00
IUUC-Ogu-078852	Oryza glumaepatula	34.93	8.00e-35	140.00
IUUC-Oin-079861	Oryza indica	33.19	8.00e-35	140.00
IUUC-Ome-081099	Oryza meridionalis	36.28	1.00e-37	149.00
IUUC-Oni-083066	Oryza nivara	33.19	8.00e-35	140.00
IUUC-Oru-085038	Oryza rufipogon	35.93	6.00e-31	127.00
IUUC-Osa-086178	Oryza sativa	36.09	2.00e-32	132.00
IUUC-Pop-099916	Populus trichocarpa	62.83	2.00e-141	494.00
IUUC-Ppe-101668	Prunus persica	56.37	1.00e-129	455.00
IUUC-Sly-111549	Solanum lycopersicum	48.94	1.00e-107	382.00
IUUC-Stu-112738	Solanum tuberosum	48.47	8.00e-107	379.00
IUUC-Vvi-131751	Vitis vinifera	60.44	7.00e-146	509.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence