iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017678

Ensembl Protein ID

Bra039878.1-P

UniProt Accession

M4FFK4; M4FFK4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra039878	Bra039878.1	Bra039878.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	91.24	0.00e+00	716.00	IUUC-Ath-006968

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

METNMFINNP SAHLPFSYTF TSSSNSSTTT STTTDSTSGQ WMDGRIWSKL PPSLLDRIIA 60
FLPPPAFFRS RCVCKRFYGL LFSNTFLEIY LQLLPPRHNC FLFFKHKTLK SYIYKRGGGG 120

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Nucleotide Sequence
(Fasta)

ATGGAAACAA ATATGTTCAT CAATAACCCA TCTGCACACT TACCGTTCTC TTACACCTTC 60
ACTAGTAGCA GCAACAGTAG CACAACCACT AGCACAACCA CAGATTCAAC ATCCGGTCAG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015916--Gal_Oxidase_b-propeller

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0006355--P:regulation of transcription, DNA-templated
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000610	Aegilops tauschii	36.70	6.00e-30	123.00
IUUC-Atr-002850	Amborella trichopoda	49.09	1.00e-94	339.00
IUUC-Apl-003324	Anas platyrhynchos	30.51	1.00e-02	34.70
IUUC-Aly-006302	Arabidopsis lyrata	90.99	0.00e+00	710.00
IUUC-Ath-006968	Arabidopsis thaliana	91.24	0.00e+00	721.00
IUUC-Bdi-014051	Brachypodium distachyon	39.25	1.00e-39	156.00
IUUC-Bol-015604	Brassica oleracea	97.76	0.00e+00	755.00
IUUC-Dse-031274	Dothistroma septosporum	25.00	8.00e-03	31.20
IUUC-Fox-038013	Fusarium oxysporum	42.86	8.60e-01	27.70
IUUC-Gma-043918	Glycine max	67.08	2.00e-139	488.00
IUUC-Lpe-050979	Leersia perrieri	38.11	9.00e-65	240.00
IUUC-Mtr-058083	Medicago truncatula	66.00	5.00e-144	503.00
IUUC-Mac-065290	Musa acuminata	54.41	9.00e-74	270.00
IUUC-Ncr-068766	Neurospora crassa	32.69	4.00e-01	29.60
IUUC-Oba-075643	Oryza barthii	38.16	2.00e-33	135.00
IUUC-Obr-076079	Oryza brachyantha	43.69	5.00e-49	187.00
IUUC-Ogl-077787	Oryza glaberrima	41.75	5.00e-54	204.00
IUUC-Ogu-078033	Oryza glumaepatula	37.91	6.00e-43	167.00
IUUC-Oin-079846	Oryza indica	45.42	3.00e-58	218.00
IUUC-Ome-081692	Oryza meridionalis	42.61	3.00e-57	215.00
IUUC-Oni-082165	Oryza nivara	40.70	1.00e-43	170.00
IUUC-Opu-083728	Oryza punctata	42.86	4.00e-58	218.00
IUUC-Oru-084676	Oryza rufipogon	42.61	3.00e-57	215.00
IUUC-Osa-085876	Oryza sativa	42.61	3.00e-57	215.00
IUUC-Ppa-095856	Physcomitrella patens	22.79	4.00e-09	55.50
IUUC-Pop-099723	Populus trichocarpa	66.42	7.00e-157	546.00
IUUC-Ppe-101645	Prunus persica	64.78	1.00e-142	499.00
IUUC-Smo-109217	Selaginella moellendorffii	45.27	5.00e-89	320.00
IUUC-Sly-111026	Solanum lycopersicum	61.41	1.00e-135	475.00
IUUC-Stu-111937	Solanum tuberosum	60.87	1.00e-139	489.00
IUUC-Sbi-114342	Sorghum bicolor	43.01	2.00e-56	212.00
IUUC-Tca-121846	Theobroma cacao	69.90	2.00e-157	548.00
IUUC-Tae-125944	Triticum aestivum	43.75	4.00e-55	208.00
IUUC-Tur-126494	Triticum urartu	24.39	2.00e-19	90.10
IUUC-Vvi-130852	Vitis vinifera	67.74	1.00e-144	505.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence