iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002612

Ensembl Protein ID

ERN13331

UniProt Accession

W1PZ68; W1PZ68_AMBTC

Genbank Protein ID

ERN13331.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392588

Gene Name

AMTR_s00041p00100290

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00041p00100290	ERN13331	ERN13331

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-25	88.3	292	324
UBD/Beta-Prp	1.10e-43	150.0	281	499

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           gHt +v++++f   d +ll+s+s D +ik+WD+
   Q: 292  GHTKGVSAIRFfpKDgHLLLSASMDTKIKIWDV 324
           8*********99966799**************7 PP

UBD/Beta-Prp

   S: 39   vttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdl.stgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghd 137
           + ++k  ++ sgh+++v+a++f p++  +l+++s D  ik+wd+ +++kc++t+ gh++ v++++fs +g+k++s++ d+ i+ wd+etg++++++ +g+ 
   Q: 281  YIPKKHYHTWSGHTKGVSAIRFFPKDGhLLLSASMDTKIKIWDVfNSRKCMRTYMGHSKAVRDITFSNDGSKFLSTGYDKKIKYWDTETGSVISTFSTGKI 381
           5667778999***********9886556**************862689**********************************************9999*** PP
   S: 138  gvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng.htdnvksvrfspnder 236
           + v  ++ ++d+ n+l +G+ D+++  Wd+++g++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++    +++   + h   + s+ ++pn+++
   Q: 382  AYVIKLNPDEDKqNILLAGMSDKKIVQWDMRSGEITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEpHMHSMPSISLHPNSNW 481
           ***********99**************************98.*******************************98877766555699************** PP
   S: 237  lvsgssDgsiriWdlrsg 254
           l+  s D++i i+ +r +
   Q: 482  LAAQSLDNQILIYSTRER 499
           ************977665 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MDLLQSYKDD TYDSSPSQSN VDDSPRSSPN SSPLRISLPS KSSAPKVDET MLSLNLVDTG 60
RPLPKPIDPV QHVVAFNPTY DQLWAPIYGP AHPFTKDGLA QGMRNHKLGF VENAAIEPFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTGT TGCAAAGCTA TAAAGATGAC ACTTATGATT CGAGTCCGTC ACAAAGTAAC 60
GTAGATGATT CCCCCCGTTC TTCTCCTAAT TCATCTCCAT TAAGGATTTC CCTACCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Csv-025868	Ciona savignyi	65.22	8.00e-36	140.00
IUUC-Kpa-049318	Komagataella pastoris	47.54	2.00e-91	328.00
IUUC-Ptt-103731	Puccinia triticina	48.66	2.00e-133	468.00
IUUC-Sce-106339	Saccharomyces cerevisiae	36.86	2.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence