iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016092

Ensembl Protein ID

Bo3g060890.1

UniProt Accession

A0A0D3BA26; A0A0D3BA26_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g060890	Bo3g060890.1	Bo3g060890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-07	33.4	980	1017

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H++ vtc++   ++  ++sGs D+ti++W + +g+l++
   Q: 980  HKSAVTCFSVceTGESVLSGSADKTIRIWQIVKGKLEC 1017
           9******998876699**************99998875 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MASPPNLISC NESSDLESIQ EIVVSINDYI LSVVSNPEVW FSLKQQCISM LSIEEENTLF 60
EFSSEHSALS NLYWGIESIE ASLQPESSEE KMSRLRNSER MLQMPALLDE QGTTTSGVPN 120

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Nucleotide Sequence
(Fasta)

ATGGCTTCTC CTCCAAATCT GATCTCCTGT AACGAGAGTT CTGATCTTGA ATCCATTCAG 60
GAAATTGTAG TTTCCATCAA CGACTACATT CTCAGCGTAG TATCAAATCC TGAAGTATGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000535	Aegilops tauschii	50.06	0.00e+00	756.00
IUUC-Atr-002498	Amborella trichopoda	44.18	0.00e+00	647.00
IUUC-Aly-006263	Arabidopsis lyrata	71.44	0.00e+00	1614.00
IUUC-Ath-006648	Arabidopsis thaliana	77.94	0.00e+00	2030.00
IUUC-Bdi-014493	Brachypodium distachyon	44.93	0.00e+00	682.00
IUUC-Bra-016701	Brassica rapa	94.92	0.00e+00	2373.00
IUUC-Gma-043180	Glycine max	46.69	0.00e+00	1068.00
IUUC-Hvu-047807	Hordeum vulgare	52.76	6.00e-132	463.00
IUUC-Lpe-051180	Leersia perrieri	48.22	0.00e+00	754.00
IUUC-Mtr-057703	Medicago truncatula	45.91	0.00e+00	1002.00
IUUC-Mac-064996	Musa acuminata	47.84	0.00e+00	808.00
IUUC-Oba-075721	Oryza barthii	47.26	0.00e+00	776.00
IUUC-Obr-076233	Oryza brachyantha	47.99	0.00e+00	766.00
IUUC-Ogl-077542	Oryza glaberrima	48.91	0.00e+00	777.00
IUUC-Ogu-078363	Oryza glumaepatula	48.91	0.00e+00	773.00
IUUC-Oin-079050	Oryza indica	48.91	0.00e+00	775.00
IUUC-Olo-080332	Oryza longistaminata	46.04	0.00e+00	691.00
IUUC-Ome-081772	Oryza meridionalis	49.02	0.00e+00	768.00
IUUC-Oni-082467	Oryza nivara	48.91	0.00e+00	775.00
IUUC-Opu-083132	Oryza punctata	49.25	0.00e+00	778.00
IUUC-Oru-084836	Oryza rufipogon	48.91	0.00e+00	778.00
IUUC-Osa-085493	Oryza sativa	48.91	0.00e+00	777.00
IUUC-Pop-099360	Populus trichocarpa	58.53	0.00e+00	911.00
IUUC-Ppe-102099	Prunus persica	56.44	0.00e+00	907.00
IUUC-Smo-109666	Selaginella moellendorffii	26.26	1.00e-59	225.00
IUUC-Sit-110371	Setaria italica	49.13	0.00e+00	779.00
IUUC-Sly-111793	Solanum lycopersicum	54.75	0.00e+00	867.00
IUUC-Stu-112760	Solanum tuberosum	54.78	0.00e+00	855.00
IUUC-Sbi-114833	Sorghum bicolor	47.89	0.00e+00	731.00
IUUC-Tca-121753	Theobroma cacao	59.53	0.00e+00	1001.00
IUUC-Tae-124317	Triticum aestivum	49.94	0.00e+00	753.00
IUUC-Tur-126343	Triticum urartu	46.18	0.00e+00	755.00
IUUC-Vvi-130975	Vitis vinifera	48.87	0.00e+00	1083.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence