iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014941

Ensembl Protein ID

BRADI3G16250.1

UniProt Accession

I1I1C5; I1I1C5_BRADI

Genbank Protein ID

KQJ95284.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100832352; BRADI_3g16250

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G16250	BRADI3G16250.1	BRADI3G16250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-19	68.0	450	485
UBD/Beta-Prp	5.30e-51	174.1	404	673

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H ++v+++af  ++ tl +++++dD+ ikvWD  tg
   Q: 450  HIGGVNDIAFshPNkTLsIITCGDDKLIKVWDAQTG 485
           9999*******97766679*************8877 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkgheds 96
           ++ +sv +   +spd+++l +++  + ++ + + +       +++  h ++v+++ fs+  k   ++t+++D++ikvwd +tg+  +t++ghe+ 
   Q: 404  DAAISVNR-CLWSPDGNILGVAFSKHIVQTYTFVPNGElrqQAEIDAHIGGVNDIAFSHPNKtlSIITCGDDKLIKVWDAQTGQKQYTFEGHEAP 497
           55555555.4568*******************998776566777899************9998889***************************** PP
   S: 97   vlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvys 185
           v+s+  +   + +++ s+  d  i+ w  +      +  +   ++ ++++++ dg  l+s+++    D+ +  W+   g + rt  g  ++s   
   Q: 498  VYSVCPHYkeNIQFIFSTAIDGKIKAWLYDCLGSRVDY-DAPGHWCTTMSYSADGTRLFSCGTskdgDSHLVEWNETEGAIKRTYNGFRKRSLGV 591
           ***855544388**************955544443324.4455699999999999888888654444566777*99******************* PP
   S: 186  lsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn 264
           ++fd ++++++++++   vk+wd+ +++++ t ++    + s  +rf +++ +l++++ D+ i+i  +++ + ll++l+ ++
   Q: 592  VQFDTTRNHFLAAGDEFVVKFWDMDNTNILTTAECDGGLPASprLRFNREGSLLAVTANDNGIKILaNTDGQRLLRMLESRA 673
           *********************************999988876226677*****************76888888888887766 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKH FEDMVQGGEW DEVERYLSGF 60
TKVEDNRYSM KIFFEIRKQK YLEALDRHDR AKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCGC TGAGCAGGGA GCTGGTCTTC CTCATCCTGC AGTTCCTGGA TGAGGAAAAG 60
TTTAAGGAGA CGGTGCACAA GTAAGTGCGA CTGCCGAGTT GATCGAGTCA AAAGGTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

bdi:100832352

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000215	Aegilops tauschii	95.52	0.00e+00	2211.00
IUUC-Atr-003021	Amborella trichopoda	80.06	0.00e+00	1585.00
IUUC-Lpe-051683	Leersia perrieri	92.38	0.00e+00	2144.00
IUUC-Mac-065511	Musa acuminata	84.62	0.00e+00	1962.00
IUUC-Oba-075179	Oryza barthii	92.74	0.00e+00	2154.00
IUUC-Obr-076730	Oryza brachyantha	92.83	0.00e+00	2157.00
IUUC-Ogl-076958	Oryza glaberrima	92.91	0.00e+00	2204.00
IUUC-Ogu-078424	Oryza glumaepatula	92.74	0.00e+00	2154.00
IUUC-Oin-079972	Oryza indica	93.00	0.00e+00	2165.00
IUUC-Olo-080979	Oryza longistaminata	93.00	0.00e+00	2155.00
IUUC-Ome-081212	Oryza meridionalis	92.83	0.00e+00	2147.00
IUUC-Oni-082820	Oryza nivara	92.74	0.00e+00	2154.00
IUUC-Opu-083223	Oryza punctata	90.40	0.00e+00	2074.00
IUUC-Oru-084418	Oryza rufipogon	91.45	0.00e+00	2150.00
IUUC-Osa-086275	Oryza sativa	93.00	0.00e+00	2165.00
IUUC-Ppa-095814	Physcomitrella patens	70.07	0.00e+00	1574.00
IUUC-Smo-109119	Selaginella moellendorffii	68.66	0.00e+00	1507.00
IUUC-Sit-110121	Setaria italica	92.12	0.00e+00	2117.00
IUUC-Sly-111268	Solanum lycopersicum	75.57	0.00e+00	1800.00
IUUC-Sbi-114032	Sorghum bicolor	91.19	0.00e+00	2088.00
IUUC-Tca-121774	Theobroma cacao	77.35	0.00e+00	1787.00
IUUC-Tae-125673	Triticum aestivum	95.52	0.00e+00	2211.00
IUUC-Tur-126718	Triticum urartu	94.11	0.00e+00	2166.00
IUUC-Vvi-131109	Vitis vinifera	78.68	0.00e+00	1863.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence