iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058586

Ensembl Protein ID

AES91574

UniProt Accession

G7JE66; A0A0C3X5Q2; G7JE66_MEDTR

Genbank Protein ID

AES91574.2

Protein Name

Topless-like protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g114980

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g114980	AES91574	AES91574
MTR_4g114980	KEH32128	KEH32128

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-19	71.1	462	497
UBD/Beta-Prp	3.80e-43	149.2	350	540

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H++sv++laf  ++  l +v+++ D +ikvWD  tg
   Q: 462  HAGSVNDLAFsyPNkQLcVVTCGEDRVIKVWDAVTG 497
           9*********99774334799***********8776 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee..................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlkt 168
           v+tl+ + ++v s++f+p ++  l++G++   ++vwd+ +++ + +                  + ++ +++vn vv++pdg l+  +    +v +++   
   Q: 350  VMTLN-QGSTVKSMDFHPlQQILLLVGTNMGDVMVWDIGSRERIAHrsfkvwdlqvcsvalqasLSNEYSASVNRVVWSPDGTLCSVAYSKHIVHIYSYHG 449
           66777.8899********77799*********************99*****************999999******************************** PP
   S: 169  gkllrtl...tgghtdsvyslsfdsng..kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs..pnderlvsgssDgsiriW...d 250
           g+ lr     + +h +sv+ l+f++     ++v++++d+ +k+wd  tg   +t++gh+++v+sv  +  +n +++ s++ Dg i+ W   +
   Q: 450  GDDLRNHleiE-AHAGSVNDLAFSYPNkqLCVVTCGEDRVIKVWDAVTGAKQYTFEGHEAPVYSVCPHhkENIQFIFSTATDGKIKAWlydN 540
           *9999988955.6*********8765434789*********************************9987788899*************6643 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKESVHRLEQ ESGFFFNMRY FEEMVTNGEW DEVEKYLTGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKGDR SKAVEILVKD LKVFAAFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCGT TAAGCAGAGA ACTCGTTTTT CTCATACTCC AGTTTCTCGA TGAAGAGAAA 60
TTCAAGGAGT CTGTTCATAG GTATATATAT GCTTAATTTG TTCAAATTTG TTCAAATTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

mtr:MTR_4g114980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002737	Amborella trichopoda	79.48	0.00e+00	1774.00
IUUC-Aly-006463	Arabidopsis lyrata	75.04	0.00e+00	1667.00
IUUC-Ath-007634	Arabidopsis thaliana	74.78	0.00e+00	1684.00
IUUC-Bol-015812	Brassica oleracea	74.05	0.00e+00	1709.00
IUUC-Bra-016964	Brassica rapa	73.88	0.00e+00	1703.00
IUUC-Gma-043977	Glycine max	91.29	0.00e+00	2037.00
IUUC-Pop-099438	Populus trichocarpa	83.44	0.00e+00	1873.00
IUUC-Ppe-101506	Prunus persica	85.02	0.00e+00	1926.00
IUUC-Sly-111451	Solanum lycopersicum	76.21	0.00e+00	1746.00
IUUC-Stu-112409	Solanum tuberosum	79.21	0.00e+00	1808.00
IUUC-Tca-121699	Theobroma cacao	83.71	0.00e+00	1937.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence